mRNA_H-canaliculatus_M_contigs8317.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 9.170e-22 Identity = 44/63 (69.84%), Postives = 52/63 (82.54%), Query Frame = 1
Query: 46 MFISLTLHFVQGGSMRTIDFACQPFNESHTGVNIARILKSIFVDKGLDPKKCLGITMDNAANM 234
MFIS T+HFV G ++RTID AC+PFN +H+G NIA+ LKSI D GLDPKKC GITMDNA+NM
Sbjct: 1 MFISFTIHFVDGETLRTIDLACRPFNVTHSGENIAKELKSILTDAGLDPKKCTGITMDNASNM 63
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: zinc (finger BED domain-containing protein 1-like n=2 Tax=Gouania willdenowi TaxID=441366 RepID=UPI0010548952) HSP 1 Score: 54.7 bits (130), Expect = 7.530e-7 Identity = 25/78 (32.05%), Postives = 41/78 (52.56%), Query Frame = 1
Query: 1 YYGCSTDIWTSSKRNMFISLTLHFVQGGSMRTIDFACQPFNESHTGVNIARILKSIFVDKGLDPKKCLGITMDNAANM 234
+Y +TD+W+S ++SLT+HF+ ++R++ F E H G IA LK LD K+ +T D+ N+
Sbjct: 56 FYSATTDLWSSRTMQPYMSLTVHFIDNWTLRSVCLQTAYFPEDHKGETIAHGLKDALSSWNLDEKRLTCMTTDSGTNI 133
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: zinc (finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B934D8E) HSP 1 Score: 54.3 bits (129), Expect = 1.020e-6 Identity = 26/79 (32.91%), Postives = 41/79 (51.90%), Query Frame = 1
Query: 1 YYGCSTDIWTSSKRNMFISLTLHFVQGG-SMRTIDFACQPFNESHTGVNIARILKSIFVDKGLDPKKCLGITMDNAANM 234
++ +TD WT S FISLT HF+ + + C +E HTG NIA +++ +F+D + K + D +NM
Sbjct: 215 FFTFTTDCWTLSSNQPFISLTCHFINANFKLNSACLGCIELSEDHTGENIADVVQMLFLDYEVPDWKICSVVTDYGSNM 293
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WHN2_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.420e-6 Identity = 27/79 (34.18%), Postives = 44/79 (55.70%), Query Frame = 1
Query: 1 YYGCSTDIWTSSKRNMFISLTLHFVQGG-SMRTIDFACQPFNESHTGVNIARILKSIFVDKGLDPKKCLGITMDNAANM 234
+Y + DIWTS ++LT+HF+ +R+ F +HTGV IA+++KS+ + GLDP + I D +N+
Sbjct: 32 FYNLTNDIWTSRITESLLALTIHFMTAAYKIRSHPLEIVSFPGNHTGVLIAKMIKSLMIKWGLDPLRLTKILRDIGSNV 110
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: E3 (SUMO-protein ligase ZBED1-like n=1 Tax=Micropterus salmoides TaxID=27706 RepID=UPI0018EC69D2) HSP 1 Score: 52.0 bits (123), Expect = 6.790e-6 Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 1
Query: 1 YYGCSTDIWTSSKRNMFISLTLHFV-QGGSMRTIDFACQPFNESHTGVNIARILKSIFVDKGLDPKKCLGITMDNAANM 234
YY +TD+ +S +ISLT+HF+ + +++ F E HT NIA ++ GLD ++ + IT DNAANM
Sbjct: 149 YYAATTDLCSSRTTEPYISLTVHFINEDFQLKSRCLQTAFFPEDHTSENIATGMREAVAAWGLDERRQVCITTDNAANM 227
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814BW25_9BILA) HSP 1 Score: 51.6 bits (122), Expect = 9.340e-6 Identity = 27/78 (34.62%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 4 YGCSTDIWTSSKRNMFISLTLHFVQGGS-MRTIDFACQPFNESHTGVNIARILKSIFVDKGLDPKKCLGITMDNAANM 234
+ C++DIWTSS + +ISLTLHF+ + + + + F +H I+ I+ SI + G+ ++ +T DNA+NM
Sbjct: 214 FHCTSDIWTSSSGDSYISLTLHFINNNNKLDQLLLDIKSFPGTHNYRTISSIIDSILDENGIK-QRIASVTSDNASNM 290
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: zinc (finger BED domain-containing protein 1 n=3 Tax=Clupeocephala TaxID=186625 RepID=UPI00165ABA39) HSP 1 Score: 51.2 bits (121), Expect = 1.270e-5 Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 13 STDIWTSSKRNMFISLTLHFVQGG-SMRTIDFACQPFNESHTGVNIARILKSIFVDKGLDPKKC-LGITMDNAANM 234
+TD WTS + +I++T H + M++ + +ESHTGVNIA +LKS + GLD + + DNA+NM
Sbjct: 188 TTDGWTSRATHSYITITAHVLTSEWEMQSYVLQTRQLSESHTGVNIAEVLKSAVKEWGLDKIGTRIAVVTDNASNM 263
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: zinc (finger BED domain-containing protein 4-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DD6A) HSP 1 Score: 50.4 bits (119), Expect = 2.270e-5 Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 13 STDIWTSSKRNMFISLTLHFV-QGGSMRTIDFACQPFNESHTGVNIARILKSIFVDKGLD-PKKCLGITMDNAANM 234
+TD WTS +I++T HF+ + ++ QP +ESHTGVNIA +LK + L+ P ++ D AANM
Sbjct: 147 TTDGWTSRATESYITITSHFIDKSWKLQNKVLQTQPMHESHTGVNIATVLKEAVGEWHLERPHGVQPLSSDGAANM 222
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814LX90_9BILA) HSP 1 Score: 50.4 bits (119), Expect = 2.360e-5 Identity = 29/78 (37.18%), Postives = 44/78 (56.41%), Query Frame = 1
Query: 4 YGCSTDIWTSSKRNMFISLTLHFVQG-GSMRTIDFACQPFNESHTGVNIARILKSIFVDKGLDPKKCLGITMDNAANM 234
+ +TDIWTSS + +IS+TLHF+ ++ + + F H + I+ +L IF D G+ K IT DNA+NM
Sbjct: 232 FHVTTDIWTSSPGDPYISVTLHFIDNQNKLKHLLLDMRHFPGVHDYITISDMLDKIFKDYGIK-HKIYSITSDNASNM 308
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Match: zinc (finger BED domain-containing protein 1-like n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=UPI000B905A45) HSP 1 Score: 49.7 bits (117), Expect = 4.460e-5 Identity = 26/76 (34.21%), Postives = 41/76 (53.95%), Query Frame = 1
Query: 13 STDIWTSSKRNMFISLTLHFVQGG-SMRTIDFACQPFNESHTGVNIARILKSIFVDKGLD-PKKCLGITMDNAANM 234
+TD WTS ++++T H + M + +P E+HTG NIA++L+ + LD PK + + DNA NM
Sbjct: 181 TTDGWTSRATQSYLTITAHVITPEWKMASFVLQTRPLFETHTGTNIAQVLREAVAEWKLDRPKHSIAVVTDNARNM 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8317.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8317.1.1 >prot_H-canaliculatus_M_contigs8317.1.1 ID=prot_H-canaliculatus_M_contigs8317.1.1|Name=mRNA_H-canaliculatus_M_contigs8317.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=78bp YYGCSTDIWTSSKRNMFISLTLHFVQGGSMRTIDFACQPFNESHTGVNIAback to top mRNA from alignment at H-canaliculatus_M_contigs8317:2240..2473+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8317.1.1 ID=mRNA_H-canaliculatus_M_contigs8317.1.1|Name=mRNA_H-canaliculatus_M_contigs8317.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=234bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8317:2240..2473+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8317:2240..2473+ >mRNA_H-canaliculatus_M_contigs8317.1.1 ID=mRNA_H-canaliculatus_M_contigs8317.1.1|Name=mRNA_H-canaliculatus_M_contigs8317.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=234bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8317:2240..2473+ (Hapterophycus canaliculatus Oshoro7m male)back to top |