mRNA_H-canaliculatus_M_contigs8307.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8307.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8307.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJJ2_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 1.110e-98
Identity = 151/182 (82.97%), Postives = 163/182 (89.56%), Query Frame = 1
Query:  205 KPVQRKSLFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDG---KAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIPASEVPLQT 741
            KPVQRK+LFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATR+TQFCT+LF RGQF KPA+C  GL KPSVAVRCNPRLFTL+G GD    +AV  +MCDLPYRAVFAVVSLDAV+VYDTEH+ PL VA GLH SALTDACWSSDGL+LFVSSTDGYVSKIHFE GELG T+P S+VPLQT
Sbjct:  333 KPVQRKNLFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRQTQFCTHLFTRGQFAKPAICLLGLTKPSVAVRCNPRLFTLKGCGDNTRSEAVEEAMCDLPYRAVFAVVSLDAVVVYDTEHATPLMVANGLHLSALTDACWSSDGLALFVSSTDGYVSKIHFEPGELGDTLPCSDVPLQT 514          
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: Chromatin (assembly factor I P60 subunit, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9RU27_RICCO)

HSP 1 Score: 176 bits (446), Expect = 5.720e-49
Identity = 100/242 (41.32%), Postives = 140/242 (57.85%), Query Frame = 1
Query:    1 LKGTAWDPLSKYMATQSSDRSCRVYQITQDGGIASSGAGRASFAEEKSHVDNSEASRAATNLAGAEGTKPVQRKSLFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDGKAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIPASE 726
            ++G AWDPL+KY A+ SSDR+CRVY              +    E+ ++V     S+A   L+ A+ +K      LF DET+ SFFRRL+WSPDG+FL+ P   +  +    T   TY+F R  F +PAL   G +KP VAVR  P  F+LR     ++  A    LPYR +FAV +L+++ +YDTE + P+ +  GLH++A+TD  WSS+   L VSS DGY + + FE  ELG  I   E
Sbjct:  157 VQGVAWDPLAKYAASLSSDRTCRVYVHKSQP--------KGKVVEKMNYVCQHVISKAEQPLSDAKSSK----NHLFHDETLPSFFRRLAWSPDGSFLVVPAGSYKTSPASDTVNTTYVFSRKDFSRPALLLPGASKPVVAVRFCPMAFSLR-----ESHSAGFFKLPYRLIFAVATLNSLYIYDTESAPPIAILAGLHYAAITDIAWSSNAQYLAVSSQDGYCTLVEFEINELGLPITLGE 381          
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: WD40 (domain-containing protein n=2 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3D3Y4_CEPFO)

HSP 1 Score: 175 bits (443), Expect = 1.550e-48
Identity = 101/243 (41.56%), Postives = 139/243 (57.20%), Query Frame = 1
Query:    1 LKGTAWDPLSKYMATQSSDRSCRVYQITQDGGIASSGAGRASFAEEKSHVDNSEASRAATNLAGAEGTKPVQRKSLFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDGKAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIPASEV 729
            ++G AWDPL KY+A+ SSDR+CR+Y         S    +A  AE+  +V     ++A         +    +  LF DET+ SFFRRL+WSPDG FL+ P   +  +   +T   TY+F R  F +PAL   G +KP VAVR  P  F+LRG     +  A    LPYR +FAV +L+++ +YDTE   P+ +  GLH++A+TD  WSSDG  L +SS DGY + + FE  ELG  I  S V
Sbjct:  157 VQGVAWDPLGKYVASLSSDRTCRIY--------VSRPQSKAKGAEKMYYVCQHIITKAEQQTVDDSKSS---KSHLFHDETLPSFFRRLAWSPDGLFLLVPAGSYKISPASETVNTTYIFSRKDFSRPALQLPGASKPVVAVRFCPVAFSLRG-----STSAGFFKLPYRIIFAVATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSSDGRYLALSSQDGYCTLVEFEKDELGSPISLSGV 383          
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QNB9_SPIOL)

HSP 1 Score: 174 bits (442), Expect = 1.960e-48
Identity = 101/239 (42.26%), Postives = 138/239 (57.74%), Query Frame = 1
Query:    1 LKGTAWDPLSKYMATQSSDRSCRVYQITQDGGIASSGAGRASFAEEKSHVDNSEASRAATNLAGAEGTKPVQRKSLFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDGKAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIP 717
            ++G AWDPLSKY+A+ SSDR+CR+Y         + G  R ++A +   V         T    A+ TK + +  LF DET+ SFFRRL+WSPDG+FL+ P   +  +   ++    Y+F R    +PAL   G +KP VAV   P  F+LRG        A    LPYR +FAV +L++V +YDTE   PL V  GLH++A+TD  WS DG  L +SS DGY + + F+S ELG  IP
Sbjct:  157 VQGVAWDPLSKYVASLSSDRTCRIYVNKPQ---KAKGVERMNYACQHVIVK--------TEQQSADDTKGL-KNHLFHDETLPSFFRRLAWSPDGSFLVVPAGLYKSSPESESINTAYIFSRKDLSRPALQLPGASKPVVAVHFCPLAFSLRGSNS-----AGFFKLPYRLIFAVATLNSVYIYDTESVAPLAVLAGLHYAAITDIAWSPDGKYLAISSQDGYCTLVEFQSDELGSPIP 378          
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: WD40 (repeat-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR22_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.200e-48
Identity = 104/251 (41.43%), Postives = 149/251 (59.36%), Query Frame = 1
Query:    1 LKGTAWDPLSKYMATQSSDRSCRVY------QITQDGGIASSGAGRASFAEEKSHVDNSEASRAATNLAGAEGTKPVQRKSLFVDET-VTSFFRRLSWSPDGAFLITPTAQ-HWDAATRKTQ------FCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDGKAVGASMCD--LPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELG 705
            ++G A+DPL  Y+A+   DR+ RV+      +  +  G       R+   E+ S+ +N+       N   +E T    +  LFVDE+   SFFRRL+W+ DGAFL+TP A  H +  T+ T       F TYLF R +F +P    TGL+KPSV VR NP LF L           S+    LPYR++FAV++LD++++YDT H+ PL+V  GLH+S LTD CWS DG++L V S+DGY+S ++F +G+LG
Sbjct:  133 VQGVAYDPLGVYIASMGGDRTVRVFPRKTPQKSKKKVGKPKRIKQRSIMVEDTSNSNNN-------NDKTSEKTMKQIKHKLFVDESNCESFFRRLNWTVDGAFLVTPAALWHEENGTKTTSSSGSPLFSTYLFARHRFDEPYRVLTGLDKPSVVVRPNPVLFALPPSVSKNHPPGSISPTGLPYRSIFAVLTLDSILIYDTHHAAPLSVIQGLHYSGLTDCCWSPDGMNLMVCSSDGYISMVNFNNGDLG 376          
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: chromatin (assembly factor 1 subunit FAS2-like isoform X2 n=2 Tax=Nicotiana TaxID=4085 RepID=A0A1S4D702_TOBAC)

HSP 1 Score: 171 bits (434), Expect = 6.140e-48
Identity = 101/246 (41.06%), Postives = 143/246 (58.13%), Query Frame = 1
Query:    1 LKGTAWDPLSKYMATQSSDRSCRVYQITQDGGIASSGAGRASFAEEKSHVDNSEASRAATNLAGAEGTKPVQRKS----LFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDGKAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIPASE 726
            ++G  WDPLSKY A+ SSDRSCR+Y I +     + G  + +F  +  HV           +   E  +P + KS    LF+DET+ SFFRRLSWSPDG+FL+ P   +      +     Y+F R    +PAL   G +KP VAVR  P  F+LRG  +     +S   LPYR +FAV +L+++ VYDTE   P+ +  GLH++A+TD  WS++G  L +SS DGY + + FE+ ELG T+ + E
Sbjct:   86 VQGVTWDPLSKYAASLSSDRSCRIY-INRPS--KTKGVEKLNFVCQ--HV-----------IMKVEPQQPDESKSTKNHLFLDETLPSFFRRLSWSPDGSFLLVPAGSYKFTPASEPSNTAYVFSRKDLSRPALMLPGASKPVVAVRFCPMTFSLRGSSN-----SSFFKLPYRLIFAVATLNSLYVYDTESVQPIAIVAGLHYAAVTDIAWSANGKYLALSSQDGYCTLLEFENEELGSTLCSPE 310          
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YSM3_OPUST)

HSP 1 Score: 172 bits (435), Expect = 2.360e-47
Identity = 98/246 (39.84%), Postives = 140/246 (56.91%), Query Frame = 1
Query:    1 LKGTAWDPLSKYMATQSSDRSCRVY----QITQDGGIASSGAGRASFAEEKSHVDNSEASRAATNLAGAEGTKPVQRKSLFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDGKAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIPASE 726
            ++G AWDPLSKY+ + SSDR+CR+Y    Q T+D              E  ++V     S+     A         +  LF DET+ SFFRRL+WSPDG+FL+ P   +  +   ++    Y+F R    +PAL   G +KP+VAVR  P  F+LRG     +  A   +LPYR VFAV +L+++ +YDTE   PL +  GLH++A+TD  WS +G  L +SS DGY + + F+S ELG  +P S+
Sbjct:  157 VQGVAWDPLSKYVTSLSSDRTCRIYVNKPQRTKD-------------TERMNYVCQHVISKMERQTAD---DAKCLKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKSSPASESVNTAYVFSRSDLSRPALQLPGASKPAVAVRFCPLAFSLRG---SNSANAGYFNLPYRLVFAVATLNSLYIYDTETVIPLAIFAGLHYAAITDVAWSPNGKYLALSSQDGYCTLVEFQSEELGSPLPLSD 383          
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: Chromatin (assembly factor 1 subunit fas2 n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1J6KTY6_NICAT)

HSP 1 Score: 171 bits (434), Expect = 2.880e-47
Identity = 101/246 (41.06%), Postives = 143/246 (58.13%), Query Frame = 1
Query:    1 LKGTAWDPLSKYMATQSSDRSCRVYQITQDGGIASSGAGRASFAEEKSHVDNSEASRAATNLAGAEGTKPVQRKS----LFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDGKAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIPASE 726
            ++G AWDPLSKY A+ SSDRSCR+Y I +     + G  + +F  +  HV           +   E   P + KS    LF+DET+ SFFRRLSWSPDG+FL+ P   +      +     Y+F R    +PAL   G +KP VAVR  P  F+LRG  +     +S   LPYR +FAV +L+++ +YDTE+  P+ +  GLH++A+TD  WS+ G  L +SS DGY + + FE+ ELG T+ + E
Sbjct:  157 VQGVAWDPLSKYAASLSSDRSCRIY-INRPS--KTKGVEKLNFVCQ--HV-----------IMKVEPQLPDESKSTKNHLFLDETLPSFFRRLSWSPDGSFLLVPAGSYKFTPASEPSNTAYVFSRKDLSRPALMLPGASKPVVAVRFCPMTFSLRGSSN-----SSFFKLPYRLIFAVATLNSLYIYDTENVQPIAIVAGLHYAAVTDIAWSATGKYLALSSQDGYCTLLEFENEELGSTLCSPE 381          
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q732_ERYGU)

HSP 1 Score: 170 bits (430), Expect = 1.390e-46
Identity = 97/241 (40.25%), Postives = 142/241 (58.92%), Query Frame = 1
Query:    1 LKGTAWDPLSKYMATQSSDRSCRVY--QITQDGGIASSGAGRASFAEEKSHVDNSEASRAATNLAGAEGTKPVQRKSLFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDGKAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIP 717
            ++G AWDPL KY A+ SSDR+CR+Y  + T+  G+           E+ ++V     S+A + +   + +K + R  LF DET+ SFFRRL+WSPDG+FL+ P   H    T +     Y+F R    +PAL   G +KP VAVR  P+ F L G  +     +S   LPYR +FAV +L+++ +YDTE   P+ +A G+H++A+TD  WS  G  L +SS DGY + + F++ ELG  IP
Sbjct:  157 VQGVAWDPLEKYAASFSSDRTCRIYINKHTKTKGV-----------EKTNYVCQHVVSKAESQMT--DESKSI-RSHLFHDETLPSFFRRLAWSPDGSFLLVPAGSHKSTPTSEPVNTAYIFSRKDLSRPALMLPGASKPIVAVRFCPQRFHLLGTNE-----SSFFKLPYRLIFAVATLNSLYIYDTESVQPIVIAAGVHYAAITDIAWSPAGNYLALSSQDGYCTLLEFDNQELGLPIP 378          
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Match: chromatin (assembly factor 1 subunit FAS2 isoform X1 n=4 Tax=Proteaceae TaxID=4328 RepID=UPI001C4F508D)

HSP 1 Score: 169 bits (429), Expect = 1.690e-46
Identity = 98/241 (40.66%), Postives = 139/241 (57.68%), Query Frame = 1
Query:    1 LKGTAWDPLSKYMATQSSDRSCRVYQITQDGGIASSGAGRASFAEEKSHVDNSEASRAATNLAGAEGTKPVQRKSLFVDETVTSFFRRLSWSPDGAFLITPTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFTLRGGGDGKAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHFSALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIPAS 723
            ++G +WDPL +Y+A+ SSDR+CR+Y              +    E+ ++V     S+    L     T    + SLF DET+ SFFRRL+WSPDG+FL+TP   +  + T ++   TY+F R    +PAL   G NKP VAVR  P +F LR   D K+   +   LPYR VFA+ +L++V +YDT+   P+ +  GLH++A+TD  WSSD   L +SS DGY S + F S ELG  +  S
Sbjct:  157 VQGVSWDPLGRYVASLSSDRTCRIYMNKPQA--------KTKGLEKMNYVCQHVISKVGQKLGDENKTS---KHSLFHDETLPSFFRRLAWSPDGSFLLTPAGSYKFSPTSQSVNTTYIFPRKNLSRPALQLPGANKPVVAVRFCPIVFDLR---DSKS--DTYFKLPYRVVFAIATLNSVYIYDTQSVVPIALLAGLHYAAITDIAWSSDAKYLALSSQDGYCSLVEFASEELGLPVSLS 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8307.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.110e-9882.97protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJJ2... [more]
Chromatin5.720e-4941.32assembly factor I P60 subunit, putative n=2 Tax=Ri... [more]
WD401.550e-4841.56domain-containing protein n=2 Tax=Cephalotus folli... [more]
Uncharacterized1.960e-4842.26protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID... [more]
WD402.200e-4841.43repeat-like protein (Fragment) n=1 Tax=Fragilariop... [more]
chromatin6.140e-4841.06assembly factor 1 subunit FAS2-like isoform X2 n=2... [more]
Uncharacterized2.360e-4739.84protein n=1 Tax=Opuntia streptacantha TaxID=393608... [more]
Chromatin2.880e-4741.06assembly factor 1 subunit fas2 n=4 Tax=Nicotiana T... [more]
Uncharacterized1.390e-4640.25protein n=1 Tax=Erythranthe guttata TaxID=4155 Rep... [more]
chromatin1.690e-4640.66assembly factor 1 subunit FAS2 isoform X1 n=4 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8307contigH-canaliculatus_M_contigs8307:1878..3385 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FJJ2
Preferred nameCHAF1B
PFAMsCAF-1_p60_C,WD40
Model size741
Max annot lvl2759|Eukaryota
KEGG koko:K10751
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000775,GO:0000785,GO:0000790,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006310,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006335,GO:0006338,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007275,GO:0008150,GO:0008152,GO:0008283,GO:0008593,GO:0009058,GO:0009059,GO:0009555,GO:0009653,GO:0009888,GO:0009933,GO:0009966,GO:0009967,GO:0009987,GO:0010026,GO:0010646,GO:0010647,GO:0016043,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0030154,GO:0031297,GO:0031497,GO:0031507,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033186,GO:0033260,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0034723,GO:0034728,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043933,GO:0043954,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045005,GO:0045747,GO:0046483,GO:0048229,GO:0048366,GO:0048367,GO:0048507,GO:0048518,GO:0048522,GO:0048532,GO:0048583,GO:0048584,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051276,GO:0051716,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070827,GO:0070828,GO:0070829,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090558,GO:0098687,GO:0099402,GO:1901360,GO:1901576,GO:1902298,GO:1902969,GO:1903047,GO:1990426,GO:1990505
Exons5
Evalue1.82e-99
EggNOG OGsKOG1009@1|root,KOG1009@2759|Eukaryota
Descriptionnucleosome assembly
Cds size741
COG categoryT
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854146.399591-CDS-H-canaliculatus_M_contigs8307:1877..19951696854146.399591-CDS-H-canaliculatus_M_contigs8307:1877..1995Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8307 1878..1995 +
1696854146.4211795-CDS-H-canaliculatus_M_contigs8307:2094..21771696854146.4211795-CDS-H-canaliculatus_M_contigs8307:2094..2177Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8307 2095..2177 +
1696854146.4389193-CDS-H-canaliculatus_M_contigs8307:2369..25481696854146.4389193-CDS-H-canaliculatus_M_contigs8307:2369..2548Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8307 2370..2548 +
1696854146.4521363-CDS-H-canaliculatus_M_contigs8307:2688..29311696854146.4521363-CDS-H-canaliculatus_M_contigs8307:2688..2931Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8307 2689..2931 +
1696854146.463968-CDS-H-canaliculatus_M_contigs8307:3267..33851696854146.463968-CDS-H-canaliculatus_M_contigs8307:3267..3385Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8307 3268..3385 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8307.1.1prot_H-canaliculatus_M_contigs8307.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8307 1878..3385 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8307.1.1

>prot_H-canaliculatus_M_contigs8307.1.1 ID=prot_H-canaliculatus_M_contigs8307.1.1|Name=mRNA_H-canaliculatus_M_contigs8307.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=247bp
LKGTAWDPLSKYMATQSSDRSCRVYQITQDGGIASSGAGRASFAEEKSHV
DNSEASRAATNLAGAEGTKPVQRKSLFVDETVTSFFRRLSWSPDGAFLIT
PTAQHWDAATRKTQFCTYLFVRGQFVKPALCFTGLNKPSVAVRCNPRLFT
LRGGGDGKAVGASMCDLPYRAVFAVVSLDAVMVYDTEHSHPLTVATGLHF
SALTDACWSSDGLSLFVSSTDGYVSKIHFESGELGHTIPASEVPLQT
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mRNA from alignment at H-canaliculatus_M_contigs8307:1878..3385+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8307.1.1 ID=mRNA_H-canaliculatus_M_contigs8307.1.1|Name=mRNA_H-canaliculatus_M_contigs8307.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1508bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8307:1878..3385+ (Hapterophycus canaliculatus Oshoro7m male)
CTGAAGGGTACCGCGTGGGACCCGTTGTCCAAGTACATGGCGACGCAAAG CAGCGACCGCTCGTGCCGTGTATATCAGATTACACAAGATGGAGGTATCG CATCCTCCGGGGCTGGGCGTCCAGCCGTAAAATGCTGCAACGTCATCAAA TCGTGTGTCATTGTATCGGACGATGGCAATGGTGGTGGCTCATCCACGGG TGGAAATGTGCAGGAAGGTGCTTCTTTTGCGGAGGAAAAATCTCATGTCG ATAATTCAGAGGCGTCGAGGGCAGCCACAAATCTTGCGGGAGCGGAAGGT GTAGGGAGACACACTAAATCGGCCGACGTTGAACGGAAGGTTTCGACAGG AGGGATACCAGCCATTATTGGTGCCGTTGGCTCCGGCGGCACTCACGCGA GCGATTGCACTCAGGGCAAAAGCGTTATCCAGGGTAGATGCCGCAGCAGC GAAGACGCATACGCAACTGATGGCGGCAGCACGAAAGACAAGACTAAGCC GGTCCAGCGAAAAAGCTTGTTCGTGGACGAAACGGTCACCAGCTTCTTCC GGCGGCTAAGTTGGTCGCCCGATGGCGCTTTTCTCATCACCCCGACTGCT CAACACTGGGACGCGGCTACTCGGAAGACGCAGTTCTGCACGTACCTCTT CGTTCGTGGACAGTTTGTCAAGTGAGTTGATGAAAAAGCCATGTGTTTTC AAATGTAGAATGGCCGTCCATGTTCGTTAATTCTTCCCCCCAAAAGATTT ACCTTGACTTGAACACTTTGCTTTTCTGCGCTGATCTGGATAATTTTCCC ATCCCCAACAGGCCCGCTTTGTGCTTTACGGGCTTGAACAAGCCTTCAGT GGCTGTGAGATGCAATCCACGGTTGTTCACTTTAAGGGGAGGCGGTGACG GCAAAGCGGTGGGAGCATCGATGTGTGATTTGCCCTATCGCGCTGTGTTC GCGGTCGTGTCTTTGGATGCTGTCATGGTTTACGACACGGAGCATTCGCA CCCTCTGACAGTAGCCACCGGACTGCACTTCTCAGCGCTCACCGATGCTT GTTGGTGAGGAAAACTGGAAGCATTTGGACTAACGATGTTGTGGTGCAAT TTGTCATTTGATGTTGTACAGTGCCTACAAAGTAGTGGTAAGCAAGTGAC GTGTTGCCACCAGAATCCGCTTTGCGTCACGTGACCCATGGTGAAGCGCA GGAAGTTCCTCAAATGAGCACCATGATGGGGCACGGATTCAAAATATGCT CGGCCTTGGTGTTGAGTTCGAGATGTTTATCTTTCAACCTCATGCGACAA ATCTGTGGTGCCAGCTTCTGCTCTCTCGCGCACTCTCTTTAGATCCTGTT TTGCTTCGCCCTTCTGCCCGCGTGCTTTCGCATGACCCAGGTCTTCGGAT GGACTTTCTCTTTTCGTATCATCAACTGATGGATATGTATCGAAAATCCA TTTTGAAAGTGGGGAATTGGGACACACGATCCCCGCATCGGAGGTGCCAT TGCAAACA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8307:1878..3385+

>mRNA_H-canaliculatus_M_contigs8307.1.1 ID=mRNA_H-canaliculatus_M_contigs8307.1.1|Name=mRNA_H-canaliculatus_M_contigs8307.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=741bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8307:1878..3385+ (Hapterophycus canaliculatus Oshoro7m male)
CTGAAGGGTACCGCGTGGGACCCGTTGTCCAAGTACATGGCGACGCAAAG
CAGCGACCGCTCGTGCCGTGTATATCAGATTACACAAGATGGAGGTATCG
CATCCTCCGGGGCTGGGCGTGCTTCTTTTGCGGAGGAAAAATCTCATGTC
GATAATTCAGAGGCGTCGAGGGCAGCCACAAATCTTGCGGGAGCGGAAGG
TACTAAGCCGGTCCAGCGAAAAAGCTTGTTCGTGGACGAAACGGTCACCA
GCTTCTTCCGGCGGCTAAGTTGGTCGCCCGATGGCGCTTTTCTCATCACC
CCGACTGCTCAACACTGGGACGCGGCTACTCGGAAGACGCAGTTCTGCAC
GTACCTCTTCGTTCGTGGACAGTTTGTCAAGCCCGCTTTGTGCTTTACGG
GCTTGAACAAGCCTTCAGTGGCTGTGAGATGCAATCCACGGTTGTTCACT
TTAAGGGGAGGCGGTGACGGCAAAGCGGTGGGAGCATCGATGTGTGATTT
GCCCTATCGCGCTGTGTTCGCGGTCGTGTCTTTGGATGCTGTCATGGTTT
ACGACACGGAGCATTCGCACCCTCTGACAGTAGCCACCGGACTGCACTTC
TCAGCGCTCACCGATGCTTGTTGGTCTTCGGATGGACTTTCTCTTTTCGT
ATCATCAACTGATGGATATGTATCGAAAATCCATTTTGAAAGTGGGGAAT
TGGGACACACGATCCCCGCATCGGAGGTGCCATTGCAAACA
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