mRNA_H-canaliculatus_M_contigs8048.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8048.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8048.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: Kinesin-like (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIN1_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 3.740e-77
Identity = 158/192 (82.29%), Postives = 167/192 (86.98%), Query Frame = 1
Query:    1 QMNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAXXXXXXXXXXXXXXVGIIRSKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNAHVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLEQ 576
            QMNAASSRSHAVLTLSI Q+ L D           XXXXXXXXXXX   +G IRSKISLVDLAGSERAKSTG AGQRLKEGAQINKSLSALGNVIKALTS S G  HVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARS+EIL+L+RENA+LRA++  LE+
Sbjct:  386 QMNAASSRSHAVLTLSIIQSVLND--------XXXXXXXXXXXXXXAADLGTIRSKISLVDLAGSERAKSTGAAGQRLKEGAQINKSLSALGNVIKALTS-SGGTTHVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSREILSLKRENADLRAKVEQLER 568          
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: Kinesin-like (protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812U8M2_9DINO)

HSP 1 Score: 173 bits (438), Expect = 1.010e-46
Identity = 103/190 (54.21%), Postives = 125/190 (65.79%), Query Frame = 1
Query:    4 MNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAXXXXXXXXXXXXXXVGIIRSKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNAHVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLE 573
            MN  SSRSH+V+TL I      D  G                        +  SK+ L+DLAGSER K+TG  G RLKEGAQIN SLSALGNVI ALT  ++G  H+PYRDSKLTR+LQDSLGG +YTV+ CNVSP + +  ETLS+LRFAER KK++NK VV+ D + + IL L +EN  LRA+IA LE
Sbjct:  385 MNEHSSRSHSVVTLRIGAYDCDDVDGAT----------------------LTVSKLHLIDLAGSERQKATGATGDRLKEGAQINLSLSALGNVINALTERASGGRHIPYRDSKLTRMLQDSLGGNSYTVMICNVSPAKINVDETLSSLRFAERAKKIENKAVVNRDPKGERILELLQENKALRAKIARLE 552          
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: Kinesin-like (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBN7_9STRA)

HSP 1 Score: 155 bits (393), Expect = 6.220e-43
Identity = 101/193 (52.33%), Postives = 118/193 (61.14%), Query Frame = 1
Query:    1 QMNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAXXXXXXXXXXXXXXVGIIR--SKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNAHVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLE 573
            +MNA SSRSHAVLTL ++Q    D                          G+ R  SK+ LVDLAGSER  + GT G RL+EGA IN+SLSALGNVI ALT  +    HVPYRDSKLTRLLQDSLGG A T++   VSP   +  ETLSTLRFAER KK+KNK  V++D  +  I  L  EN  L AR+  LE
Sbjct:   61 KMNAVSSRSHAVLTLEVEQRDSDD------------------------FTGLTRMVSKLHLVDLAGSERQSAAGTTGDRLREGALINQSLSALGNVINALTEKN--RPHVPYRDSKLTRLLQDSLGGNARTLMLACVSPASINRDETLSTLRFAERAKKIKNKARVNVDPAAARIAELLEENRRLAARVEELE 227          
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: Kinesin-like (protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LHG5_POLGL)

HSP 1 Score: 160 bits (406), Expect = 8.280e-43
Identity = 97/191 (50.79%), Postives = 122/191 (63.87%), Query Frame = 1
Query:    4 MNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAXXXXXXXXXXXXXXVGIIRSKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNA-HVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLE 573
            MN  SSRSH+V+TL +      D  G                      V +  SK+ L+DLAGSER K+TG  G RLKEGAQIN SLSALGNVI ALT  + G   H+PYRDSKLTRLLQDSLGG +YTV+ CN+S  + +  ETLS+LRFAER KK++NK  V+ D + + I+ L +EN  L+A++  LE
Sbjct:  284 MNEHSSRSHSVVTLRVAACDTDDVDG----------------------VTLTVSKLHLIDLAGSERQKATGATGDRLKEGAQINLSLSALGNVINALTEPNKGKTRHIPYRDSKLTRLLQDSLGGNSYTVIVCNISLAKINAEETLSSLRFAERAKKIENKASVNRDPKGERIVELMQENKALKAKVDRLE 452          
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: Kinesin-like (protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812HG01_9DINO)

HSP 1 Score: 164 bits (414), Expect = 1.330e-42
Identity = 96/179 (53.63%), Postives = 117/179 (65.36%), Query Frame = 1
Query:    4 MNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAXXXXXXXXXXXXXXVGIIRSKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNAHVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRREN 540
            MN  SSRSH+V+TL I      D  G                        +  SK+ L+DLAGSER K+TG  G RLKEGAQIN SLSALGNVI ALT  ++G  H+PYRDSKLTR+LQDSLGG +YTV+ CNVSP + +  ETLS+LRFAER KK++NK VV+ D + + IL L +EN
Sbjct:  371 MNEHSSRSHSVVTLRIGAYDCDDVDGAT----------------------LTVSKLHLIDLAGSERQKATGATGDRLKEGAQINLSLSALGNVINALTERTSGGRHIPYRDSKLTRMLQDSLGGNSYTVMICNVSPAKINVDETLSSLRFAERAKKIENKAVVNRDPKGERILELLQEN 527          
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: Kinesin-like (protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J521_9EUKA)

HSP 1 Score: 154 bits (388), Expect = 1.380e-41
Identity = 94/190 (49.47%), Postives = 116/190 (61.05%), Query Frame = 1
Query:    4 MNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAXXXXXXXXXXXXXXVGIIRSKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNAHVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLE 573
            MN  SSRSH+V+TL I+   + D                         +    SK+ L+DLAGSER K TG  G+RLKEGAQIN SL+ALGNVI ALT  + G  HVPYRDSKLTRLLQDSLGG + TV+ CN SP   +  ETLS LRFAER KK++N   ++ D ++     L  EN +L+ +I LLE
Sbjct:  134 MNEHSSRSHSVVTLRIETCDVGD----------------------LERISATSSKLHLIDLAGSERQKGTGATGERLKEGAQINLSLTALGNVISALTEKNRG--HVPYRDSKLTRLLQDSLGGNSVTVMLCNASPAAINGEETLSALRFAERAKKIENVATINRDPKAARAAELFEENKKLKQKIDLLE 299          
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: Kinesin-like (protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RR46_PEROL)

HSP 1 Score: 156 bits (395), Expect = 3.580e-41
Identity = 99/211 (46.92%), Postives = 132/211 (62.56%), Query Frame = 1
Query:    4 MNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAXXXXXXXXXXXXXXVGIIRSKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNAH----VPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLEQGGVAAIRADETGSRNE 624
            MNA SSR+H V+++  +Q  +   +G++                     G+  S+I+LVDLAGSE+A  TG +G RLKEG  INKSLSALGNVI AL   + G A     VPYRDSKLTRLLQ++LGG++ TV+ C +SP  A+  E+LSTLR+A+R KK+KN  VV+ D + K I  LR EN +L+A +A  E GGVA  R +   +  E
Sbjct:  228 MNATSSRAHTVISIEFRQISI---MGEKK--------------------GVRMSRINLVDLAGSEKAGQTGASGDRLKEGCAINKSLSALGNVISALADKATGKARPGAVVPYRDSKLTRLLQNALGGSSKTVMICAISPASANYEESLSTLRYADRAKKIKNAAVVNEDPQDKLIRQLREENEKLKALLA--EGGGVATARPEALATMTE 413          
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: Kinesin-like (protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AN71_NOCSC)

HSP 1 Score: 156 bits (394), Expect = 6.320e-41
Identity = 99/191 (51.83%), Postives = 118/191 (61.78%), Query Frame = 1
Query:    4 MNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAXXXXXXXXXXXXXXVGIIRSKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNA-HVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLE 573
            MN  SSRSHAV+TL +  + +         GTAA                   SK+ L+DLAGSER KSTG  G+RLKEGAQIN SLSALGNVI ALT        H+PYRDSKLTRLLQDSLGG +YTV+ CN SP   +  ETL TLRFAER KKV+N   V+ D  + +I  L  E   L+A++A L+
Sbjct:  303 MNEFSSRSHAVVTLRVTTSDI--------VGTAASVQTS--------------SKLHLIDLAGSERQKSTGACGERLKEGAQINLSLSALGNVINALTEPGGKTKRHIPYRDSKLTRLLQDSLGGNSYTVMICNCSPAAINSDETLCTLRFAERAKKVENVAFVNQDPTTAKITELSNETRYLKAQLARLQ 471          
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0B7_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.250e-40
Identity = 92/157 (58.60%), Postives = 112/157 (71.34%), Query Frame = 1
Query:  157 IRSKISLVDLAGSER------------------AKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNAHVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLE 573
            I+SK+ L+DLAGSER                  AK+TG  G RLKEGA INKSLSALGNVI ALT+ +    HVPYRDSKLTRLLQDSLGG+A+ +V CNVSP    E ET+STLRFAERLKKVKN++ VH+DA +++I+ L+ +   LR R+A LE
Sbjct:  380 IKSKVHLIDLAGSERSHSQTTHXXXXXXXXXXXAKATGAEGDRLKEGANINKSLSALGNVIAALTATN--RKHVPYRDSKLTRLLQDSLGGSAFCMVICNVSPSSTCEGETVSTLRFAERLKKVKNRVHVHVDASARKIVELQSQVRALRNRVAELE 534          
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Match: Kinesin-like (protein n=1 Tax=Ascaris suum TaxID=6253 RepID=F1KU87_ASCSU)

HSP 1 Score: 157 bits (396), Expect = 5.200e-40
Identity = 89/192 (46.35%), Postives = 122/192 (63.54%), Query Frame = 1
Query:    4 MNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAXXXXXXXXXXXXXXVGIIRSKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSASAGNAHVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRFAERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLEQG 579
            MN  SSRSHA+ T++I++ P +DG G                       G  RSK+ LVDLAGSE+ K T   G+R++EG +IN+ L ALGNVI AL  A     H+PYRDSK+TRLLQDSLGG +YTV+   VSP + +  ETLSTLR+A+R KK+KNK +V++D     + +LR E A ++  +A+++ G
Sbjct:  195 MNDKSSRSHAIFTVTIEKLPGKDGEG-----------------------GCFRSKLHLVDLAGSEKLKKTQAEGERMREGIKINEGLLALGNVIAALAEAGGSTRHIPYRDSKITRLLQDSLGGNSYTVMIACVSPADTNAEETLSTLRYADRTKKIKNKPIVNVDPSVAMVESLRAELAAVKHELAMIKTG 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8048.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Kinesin-like3.740e-7782.29protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIN1... [more]
Kinesin-like1.010e-4654.21protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A8... [more]
Kinesin-like6.220e-4352.33protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486... [more]
Kinesin-like8.280e-4350.79protein n=1 Tax=Polarella glacialis TaxID=89957 Re... [more]
Kinesin-like1.330e-4253.63protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=63... [more]
Kinesin-like1.380e-4149.47protein n=1 Tax=Chrysochromulina tobinii TaxID=146... [more]
Kinesin-like3.580e-4146.92protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID... [more]
Kinesin-like6.320e-4151.83protein n=1 Tax=Noctiluca scintillans TaxID=2966 R... [more]
P-loop3.250e-4058.60containing nucleoside triphosphate hydrolase prote... [more]
Kinesin-like5.200e-4046.35protein n=1 Tax=Ascaris suum TaxID=6253 RepID=F1KU... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8048contigH-canaliculatus_M_contigs8048:194..3050 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIN1
Model size792
Max annot lvl2880.D7FIN1|-
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.24e-77
EggNOG OGsCOG5059@1|root,KOG0244@2759|Eukaryota
Ec32 ortholog descriptionKinesin-like protein
Ec32 orthologEc-27_000380.1
Descriptionmicrotubule motor activity
Cds size789
COG categoryZ
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854132.798505-UTR-H-canaliculatus_M_contigs8048:193..1961696854132.798505-UTR-H-canaliculatus_M_contigs8048:193..196Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs8048 194..196 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854132.8128743-CDS-H-canaliculatus_M_contigs8048:196..4301696854132.8128743-CDS-H-canaliculatus_M_contigs8048:196..430Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8048 197..430 +
1696854132.8255742-CDS-H-canaliculatus_M_contigs8048:1283..14061696854132.8255742-CDS-H-canaliculatus_M_contigs8048:1283..1406Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8048 1284..1406 +
1696854132.8356848-CDS-H-canaliculatus_M_contigs8048:2141..22521696854132.8356848-CDS-H-canaliculatus_M_contigs8048:2141..2252Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8048 2142..2252 +
1696854132.844935-CDS-H-canaliculatus_M_contigs8048:2729..30501696854132.844935-CDS-H-canaliculatus_M_contigs8048:2729..3050Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8048 2730..3050 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8048.1.1prot_H-canaliculatus_M_contigs8048.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8048 197..3050 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8048.1.1

>prot_H-canaliculatus_M_contigs8048.1.1 ID=prot_H-canaliculatus_M_contigs8048.1.1|Name=mRNA_H-canaliculatus_M_contigs8048.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=263bp
MNAASSRSHAVLTLSIKQTPLRDGVGQRGEGTAAAEEEEEEEEDADADVG
IIRSKISLVDLAGSERAKSTGTAGQRLKEGAQINKSLSALGNVIKALTSA
SAGNAHVPYRDSKLTRLLQDSLGGTAYTVVCCNVSPIEASEPETLSTLRF
AERLKKVKNKMVVHMDARSKEILALRRENAELRARIALLEQGGVAAIRAD
ETGSRNEVGNGPRTSPRAPLQTGDGRERATRRSDDPRETAAGTSTPPVTK
SPPPVPPRRPVA*
back to top

mRNA from alignment at H-canaliculatus_M_contigs8048:194..3050+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8048.1.1 ID=mRNA_H-canaliculatus_M_contigs8048.1.1|Name=mRNA_H-canaliculatus_M_contigs8048.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2857bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8048:194..3050+ (Hapterophycus canaliculatus Oshoro7m male)
CAGATGAACGCCGCGTCCAGCCGATCCCACGCCGTTCTCACCCTCTCCAT CAAGCAGACGCCACTGCGCGACGGCGTGGGGCAGAGGGGAGAAGGAACTG CGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGATGCGGACGCGGACGTC GGCATTATCCGCTCAAAAATAAGCCTCGTTGACTTGGCCGGGTCGGAGAG GGCTAAGTCCACCGGGACAGCTGGCCAGAGACTCAAGGTTTGTCCGAGAG TTTGTCGGGCCTACGCGCGATGCTCTCGGGCGTGATTGTACACGATATGA TGCGACAGGAAACGGTGTGGTCGGTGGATGAACGCCGGAGCGAGCAGTTT CTGCGGAGACGGAGACCGTGTGCTTCGAGCCTTCGTGTGTCGCTGACACA GTGTTCGCTGGGTAGTGTATGGAGAGAAAGAGACGACGAGATGATGATAA TAGAAAAATACTTCGTTTACGTAGTTGCCGGGGCCGTGTGCTTGATCGGC CACATGAGAGAAAAAGTCGGTCGGAGTCGATGGTCAGAGGCTGGCTCGCG CTCGAGGTTTGGTGGGGACCGTGTACGTGCCTCGTCCATATGACCTCTGG GTCTGTAGCCTGAGATCGGATTCAGCGTGCCTAAGTGGTCGAAGATAGAA ATGGGCACCCTAGTGTCCATCGTTGGCGGATATGGAGGCCGTCAACCCTT ACGGCGCACCCAAGCCATCAAGACGCTACCAACTCACCTGCGCCCAGTGA CACCTCTGAGAGACCACGAGAGTCCCTTGCGTGGGGGTCTACTGTTGGTC GACTGTGACGTGCACGAATACCGGCTTCGAGGCGCCGGATCGATGATTCA GCTAAGAAATAGGGCATTTGCTCAAATTGGCTCTCGTTTCTAGGATCAAG ACCTGGTCATCTACCAGCGCCCCATTTTCGTGCTCACACGCAACCACCAC TGCGGTGAGTCCTCGGTCCCTCCCTCCACCCCTCCGTTCCCGACCACCGC TTGGGGCCAACATTCCCGACCCTAGATAGTCTTGTTCTGATGATGGGTGT CGTGACGACGCGTCCTACGCGTGAACGTGTACGCCGACAGGAAGGCGCTC AGATCAACAAGAGCCTCAGCGCTCTAGGGAACGTGATCAAGGCGCTGACG TCGGCTTCGGCAGGAAACGCGCACGTGCCGTATCGAGATAGCAAGCTTAC GAGGCTGCTGCAGGTGCGCACGCGCTCGCATCTCAGGGAAAACATGTTCG TGAACCAATTGTTGAACGTGCTGCCTCGCGCTGTTGTAAACGCATGGTCC GCGGGTTGTAGGAGCAGCTGGGCACCGGCAATGCGCTCTGGTCTGAGGCA GAAACGCTTGCGAGGGAGGAATCGGCATGCCTCCTGTGTCCTGTGAACCT GTCCTCGGCTCAATGTCGTCCACCATCGATGTCCGCTCCTAGAATCGCGC CGCCGCCCCCCCACAAAACGACCGATTCACCGATGAAATGTGACGCTGCC TTCGTGCAAGCGTAGAGGACGGGGCCCAATCCGGTCAGAAGAGATGACCC CCAAACTGATAACTACTTGGTATCAGGTACCTCTCAGATACGCAATACAG GCTGTGATGTTGTGTCGAGTGGGTGGGATGCCCCGCAGAGGCGCCGATAA TTATTTCTTCGGGTTTTCAGGTGGCGTGCTTTTGGGCGGCGGGAAGCCAT GTTCTGCACCTTGAGCTCATGACTACCGCGTCTCGTTGTACGAGCAACGC CTTGAAGTGCAACAACACTTCAGCACCCATAGCACGGCATCAAATTGGCG GACAAGGGTGCGAAACCGCTGTACCTACCCCGCCCTTCGGACCACCATCG CTTTCGCGTCCGAAACCCCCGTGCCAGACGAGCGAGCCCTTTCCGTCTCG TGCCCGAACTGACCCGTCCGATCCCAACCGGCGGCGACCTTTCCGCAGGA CTCGCTGGGGGGCACCGCGTACACGGTTGTCTGCTGCAACGTGAGCCCGA TCGAGGCTAGCGAGCCGGAAACGCTCAGCACGCTCCGCTTCGCCGAGCGC CTCAAGAAGGTACTATAAAGAGCGTACATTGGACGTATTCTGTAGAGCTC GCGGAGGGGGCGGGTGAGGGGTCTAGACTTTCTGTCGATGCTGTCGAGAC TGCAACGGTGCATGGTGTTTCAGCTGGTCTATACTTTCGTGTCCGATTGG TCGCTGGTCGCCGTCTTTGTCACTCCAATGGCAGAAAATAGGTTGGACGA GGACCCAAAGTTGCCCCCAAAGAAAGGTGCATGTTTGACAACCTCACCGG CTGCTTGTTTTTTCAAGCTTTAAAAAAAACAACATTACAACACCGTTTTT TTGTCGGCGAAGGCGTCGTGGTCGCTACTGCTCGCTCGTTCACCGCTCGA CCTGTGGGGAGGGATCACCCACTCCCGCAATCCCGTTGAGCCTTTCCTCG CCGCTCTCGTTTCTTGCGACAACGCGACAACGTTGCTTTCACCTCTTTTA TTGCTGCCCCCCCCCCCTACCCGACCCGCCCGTCAGGTGAAAAACAAGAT GGTCGTCCACATGGACGCTCGATCAAAAGAGATCCTCGCTCTCCGGCGCG AAAATGCCGAGCTCAGGGCGAGGATCGCGCTATTGGAGCAGGGAGGGGTG GCAGCGATCAGGGCCGACGAGACCGGTTCGAGGAACGAAGTGGGGAATGG TCCTCGGACCAGCCCCAGGGCCCCTCTCCAGACAGGCGACGGAAGAGAGC GAGCAACGAGAAGATCTGACGATCCGAGAGAGACGGCGGCGGGCACCAGC ACCCCCCCCGTCACCAAGAGTCCTCCGCCGGTGCCCCCTCGCCGCCCCGT CGCGTAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8048:194..3050+

>mRNA_H-canaliculatus_M_contigs8048.1.1 ID=mRNA_H-canaliculatus_M_contigs8048.1.1|Name=mRNA_H-canaliculatus_M_contigs8048.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=789bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8048:194..3050+ (Hapterophycus canaliculatus Oshoro7m male)
ATGAACGCCGCGTCCAGCCGATCCCACGCCGTTCTCACCCTCTCCATCAA
GCAGACGCCACTGCGCGACGGCGTGGGGCAGAGGGGAGAAGGAACTGCGG
CGGCGGAGGAGGAGGAGGAGGAGGAGGAGGATGCGGACGCGGACGTCGGC
ATTATCCGCTCAAAAATAAGCCTCGTTGACTTGGCCGGGTCGGAGAGGGC
TAAGTCCACCGGGACAGCTGGCCAGAGACTCAAGGAAGGCGCTCAGATCA
ACAAGAGCCTCAGCGCTCTAGGGAACGTGATCAAGGCGCTGACGTCGGCT
TCGGCAGGAAACGCGCACGTGCCGTATCGAGATAGCAAGCTTACGAGGCT
GCTGCAGGACTCGCTGGGGGGCACCGCGTACACGGTTGTCTGCTGCAACG
TGAGCCCGATCGAGGCTAGCGAGCCGGAAACGCTCAGCACGCTCCGCTTC
GCCGAGCGCCTCAAGAAGGTGAAAAACAAGATGGTCGTCCACATGGACGC
TCGATCAAAAGAGATCCTCGCTCTCCGGCGCGAAAATGCCGAGCTCAGGG
CGAGGATCGCGCTATTGGAGCAGGGAGGGGTGGCAGCGATCAGGGCCGAC
GAGACCGGTTCGAGGAACGAAGTGGGGAATGGTCCTCGGACCAGCCCCAG
GGCCCCTCTCCAGACAGGCGACGGAAGAGAGCGAGCAACGAGAAGATCTG
ACGATCCGAGAGAGACGGCGGCGGGCACCAGCACCCCCCCCGTCACCAAG
AGTCCTCCGCCGGTGCCCCCTCGCCGCCCCGTCGCGTAG
back to top