mRNA_H-canaliculatus_M_contigs8032.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8032.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8032.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: PseudoU_synth_2 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7K6_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 3.710e-134
Identity = 233/409 (56.97%), Postives = 270/409 (66.01%), Query Frame = 1
Query:    1 PLEVLHLDEDFAAICKPPLMHVHRPEFGTKDKEFVMQKARNQLGRRIFLPHRLDRGTSGCLLLGFGPEAVKVLHQALADPRSSKTYVAIVRGSGQGFVGKGWFTVDRAIKDDKKILREASTRFLFVKGGDDPDPRCCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSLATLPGAGSSVWKSAAGGELSSSGAAAVTAEGVYRESGIKFEHPPLVRGEGGEVNRTRGSGGGSDEAGPSQEE----GKAARVDTGGAAAAGSARKGVQTPAEPKKALSEAS----RATLGLESARAFPA---------EPLLDVRGETSGGEVLPSTIQGAAAAGSSGPIDVGAGSEEGVLKGKGFRVYSEPPDDIMKFLRGMSWWEEGMI 1176
            PLEVLH +E FA + KPP MH HRPEFG++D +FVMQKAR+QLGRR+FLPHRLDR TSGCLL+GF   A KVLHQ LA P SSKTY+AIVRGSG  FVGKGWFTVDR IKD+KKILREASTRFLFV+GG+DPDPRCC VLAQPSTGRFHQIRRHLNGLSHPIVGDSVHG+ RFNREVA HRN APAGRLMLHCLRLSL TLP  GS   KSA G  LS       T    Y  S  K E     RG      + RG         PS++     G    VD   A A+GS  + VQ P E +KA S       +     +SAR  PA         EP +    E S   + PS  +  ++     P  +   ++E +++ +GF VY+EPPDD+M+FLRGMSWWEEG+ 
Sbjct:  131 PLEVLHQNEHFAVVSKPPGMHCHRPEFGSRDPDFVMQKARDQLGRRVFLPHRLDRATSGCLLVGFSSHAAKVLHQTLAQPDSSKTYLAIVRGSGSAFVGKGWFTVDRPIKDEKKILREASTRFLFVRGGNDPDPRCCFVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGDCRFNREVAGHRNSAPAGRLMLHCLRLSLPTLPDVGSQALKSATGRILSPD---KDTMTNDYCGSKRKSE-----RGHNARAGQERGER-------PSRKREDGHGNTTGVDGREARASGSVSEEVQGPVETEKAASNTGDPYPKPRSEFDSARTPPASAPRQEISTEPFVPTLAEISAA-ISPSVGKKESSTRGCRPRGIDGEAQEDLVE-EGFHVYAEPPDDMMEFLRGMSWWEEGLF 522          
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQ02_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.740e-49
Identity = 104/238 (43.70%), Postives = 137/238 (57.56%), Query Frame = 1
Query:    1 PLEVLHLDED-FAAICKPPLMHVHRPEF-------GTKDKEFVMQKARNQLGRRIFLPHRLDRGTSGCLLLGFGPEA------------------------VKVLHQALADPRSSKTYVAIVRGS----GQGFVGKGWFTVDRAIKDDKKILREASTRFLFVKGGDDP-DPRCCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSLATL 603
            P  +L  D   +  + KPP +  HR ++       GT +   ++Q+ R+Q+GRR+ L HRLDRG SGCLLL F  ++                         + L  +LAD R+ KTYVA+VRG     G+    +GWF VDR I+D + + REA T+F FV G DD    R  +VLA+P TGR+HQIRRHLNGLSHPI+GDS HGNSR NRE  + R   P  RL LH  ++SL +L
Sbjct:   67 PTRILSTDSSTYLVVAKPPAVACHRSDYIGRKAPDGTPEPPAMVQRIRDQVGRRVNLIHRLDRGASGCLLLAFAGDSRGEDEDGKDGEGGGEDSAERYRDTTRRLIASLADDRAVKTYVALVRGGPFLHGEDLRRRGWFAVDRPIRDARGVEREALTQFRFVAGTDDDCAARASIVLARPRTGRWHQIRRHLNGLSHPILGDSTHGNSRINREWRSKRG-LPGQRLCLHLAKMSLPSL 303          
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LAN5_9STRA)

HSP 1 Score: 177 bits (448), Expect = 7.210e-49
Identity = 104/212 (49.06%), Postives = 126/212 (59.43%), Query Frame = 1
Query:    4 LEVLHLDEDFAAICKPPLMHVHRPEF-GTKDKEFVM-QKARNQLGRRIFLPHRLDRGTSGCLLLGFGPE-------AVKVLHQALADPRSSKTYVAIVRGSG----QGFVGKGWFTVDRAIKDDKKILREASTRFLFVKGGDDPDP--RCCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSL 594
            +E+L      A   KPP +  H  ++ G K+ E  M Q+ R+ +GRR+ L HRLDRG SGCLL     E         KVL  AL  P ++KTYVAIVRG G    + F GKGWF +DR IKD+  I   A T F FV G +  +   R  LVLA+PSTGR+HQIRRHLNGLSHPI+GDS HGNSR NRE        P  R+ LH  R+ L
Sbjct:   55 VEILSRGPHHAIANKPPSVKCHNSDWTGPKNNEVAMLQRVRDTIGRRVNLIHRLDRGASGCLLASHAEENCDELRECTKVLSDALQSPLATKTYVAIVRGEGILKDEDFKGKGWFHIDRPIKDENGIENGAKTAFRFVAGVNRANDGVRASLVLARPSTGRWHQIRRHLNGLSHPILGDSTHGNSRTNREW--RDRGLPGERICLHLARIQL 264          
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: PseudoU_synth_2 (domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6G5_FISSO)

HSP 1 Score: 176 bits (446), Expect = 1.900e-48
Identity = 99/209 (47.37%), Postives = 135/209 (64.59%), Query Frame = 1
Query:    4 LEVLHLDEDFAAICKPPLMHVHRPEF-GTKDKEFV--MQKARNQLGRRIFLPHRLDRGTSGCLLLGFGPEA-VKVLHQALADPRSSKTYVAIVRGSG----QGFVGKGWFTVDRAIKDDKKILREASTRFLFVKGGDDPD--PRCCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSLAT 600
            + +L   +D+  + KPP +  H  ++ G++ ++ +  +Q+ R  +G RI L HRLDRG SGCLL+ +  +     L QA+A+  ++KTY+AIVRG G    +    KGWF VDR IK+++ +L EAST F FV G  + D  PR  LVLA+P TGR+HQIRRHLNGLSHPI+GDS HGNS+ N+E  A R   P  R  LH  RL L+T
Sbjct:   58 ITILAKSDDYLVVDKPPSVVCHHSDWTGSRSQQEIPMLQRVRQAVGSRINLVHRLDRGCSGCLLVTYQKDGKTATLSQAMAE-NATKTYIAIVRGEGILRGEDLKEKGWFLVDRPIKNERGVLHEASTWFRFVAGQPEVDGQPRASLVLARPMTGRWHQIRRHLNGLSHPILGDSSHGNSKVNQEWRAQRGMLPE-RTCLHLARLQLST 264          
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: PseudoU_synth_2 (domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7F0_FISSO)

HSP 1 Score: 169 bits (428), Expect = 9.150e-46
Identity = 95/211 (45.02%), Postives = 134/211 (63.51%), Query Frame = 1
Query:    4 LEVLHLDEDFAAICKPPLMHVHRPEF-GTKDKEFV--MQKARNQLGRRIFLPHRLDRGTSGCLLLGFGPE---AVKVLHQALADPRSSKTYVAIVRGSG----QGFVGKGWFTVDRAIKDDKKILREASTRFLFVKGGDDPD--PRCCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSLAT 600
            + ++   +D+  + KPP +  H  E+ G++ ++ +  +Q+ R  +G RI L HRLDR  SGCLL+ +  +      +  QA+A+  ++KTY+A+VRG G    +    KGWF VDR IK+++ +L EAST F FV G  + D  PR  LVLA+P TGR+HQIRRHLNGLSHPI+GDS HGNS+ N+E  + R   P  R  LH  RL L+T
Sbjct:   54 ITIVAKSDDYLVVDKPPSVVCHHSEWTGSRSQQEIPMLQRVRQAVGSRINLVHRLDRVCSGCLLVTYQKDDGDMTAIFSQAMAE-NATKTYIALVRGEGILHGEDLKQKGWFLVDRPIKNERGVLHEASTWFRFVAGQPEVDGQPRASLVLARPRTGRWHQIRRHLNGLSHPILGDSSHGNSKVNQEWRSQRGMLPE-RTCLHLARLQLST 262          
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZM53_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.250e-45
Identity = 102/221 (46.15%), Postives = 129/221 (58.37%), Query Frame = 1
Query:    1 PLEVLHLDEDFAAICKPPLMHVHRPEFGTKDKEF-VMQKARNQLGRRIFLPHRLDRGTSGCLLLGFGP-----EAVKVLHQALADPRSSKTYVAIVRGSG---QGFVGK-------------GWFTVDRAIKDDKKILREASTRFLFVKG-GDDPDPRCCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSL 594
            PLE+L+  + FA + KP  +  H  E+  KD    ++Q+AR+ LGRR+ L HRLDRG SGC++  +       E    L +ALA     KTYVA+VRG G   +  + K             GWF VDR IKDD+     A+T F FV   G +   R  LV A+P+TGR+HQIRRHLNGLSHPI+GDS HGNSR NRE    R+  P  RL LH  R+SL
Sbjct:   41 PLEILYEGDTFAIVAKPGGVPSHASEYIGKDYVVPLLQRARDALGRRVNLVHRLDRGASGCVICAYADLDDAAEVTTALGEALAA--GQKTYVALVRGEGFLREDLLEKAGADVPSGDLKREGWFVVDRPIKDDRGRENNATTTFKFVASTGSEDAARASLVAARPATGRWHQIRRHLNGLSHPILGDSSHGNSRTNREWRKERD-LPGARLCLHLCRISL 258          
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYH0_PHATC)

HSP 1 Score: 155 bits (392), Expect = 1.170e-40
Identity = 96/219 (43.84%), Postives = 125/219 (57.08%), Query Frame = 1
Query:   10 VLHLDEDFAAICKPPLMHVHRPEF-GTKDKEF---VMQKARNQLGRR-IFLPHRLDRGTSGCLLLGFG----------PEAVKVLHQALADPRSSKTYVAIVRGSG--QG--FVGKGWFTVDRAIKDDKKILREASTRFLFVKGGDDPD-----PRCCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSL 594
            +L   + +  + KPP +  H  E+ G++   F   ++Q+ R  +G   + L HRL+ G SGCLLL +           P     L  ++ +  S KTY+A+VRG G  QG  F  +GWF VDR IK++K IL  A+T F FV G D+       PR  LVLA+P TGR+HQIRRHLNGLSHPI+GD+ HGNS  NRE    R   PA R  LH  RL L
Sbjct:   91 ILARTDRYVVVAKPPTVVCHHSEWTGSRSDPFQIPMLQRTREAMGGNCVNLVHRLNWGCSGCLLLTYAADTADAEIYIPNTTATLIASMKETASLKTYLALVRGEGLLQGRDFKQEGWFKVDRPIKNEKGILNNATTWFRFVAGQDNDSGRINQPRASLVLARPETGRWHQIRRHLNGLSHPILGDTSHGNSHVNREWRDLRG-MPAQRTCLHLARLQL 308          
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: Pseudouridine (synthase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F626_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.540e-40
Identity = 89/226 (39.38%), Postives = 127/226 (56.19%), Query Frame = 1
Query:    4 LEVLHLDEDFAAICKPPLMHVHRPEFG-----------TKDKEFVMQKARNQLGRRIFLPHRLDRGTSGCLLLGF------GPEAVKVLHQALADPRSS-----KTYVAIVRGSG----QGFVGKGWFTVDRAIKDDKKILREASTRFLFVKGGDDPD---PRCCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSL 594
            + +L   ++   + KP  +  HR ++            T ++  ++Q+ R  +G ++ L HRLDRG SGCLL  F      G  A  ++ + + +  SS     KTY+AIVRG G    + F  +GWF VDR IKD+   L+ A++ F F+ G DD +   PR  LVLA+  TGR+HQIR+HLNGLSHPI+GDS HG S+ NRE    +      R+ LH L+L L
Sbjct:   12 VSILDRGDNHVVVSKPSAVICHRSDWTGRRNRKKESIITSEEVPMLQRVREAVGEKVNLVHRLDRGASGCLLFSFAKSDKDGGNATAIMQECMTNDSSSTSDTHKTYIAIVRGEGLLKGRDFRQEGWFEVDRPIKDESGNLKNATSYFRFIAGQDDGNGTRPRASLVLARIKTGRWHQIRKHLNGLSHPIIGDSTHGISKTNREWI-EKWDLKRERICLHLLKLEL 236          
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: PseudoU_synth_2 (domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1P7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.340e-39
Identity = 92/229 (40.17%), Postives = 127/229 (55.46%), Query Frame = 1
Query:    4 LEVLHLDEDFAAICKPPLMHVHRPEFGTKDKEF-----------VMQKARNQLGRRIFLPHRLDRGTSGCLLLGF------GPEAVKVLHQALADPRSS-KTYVAIVRGSG----QGFVGKGWFTVDRAIKDDKKILREASTRFLFVKGGDDPD------PRCCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSLATLP 606
            + +L    +   + KPP +  HR ++    K+            ++Q+AR  +G R+ L HRLDRG SGCLL+ F      G  A  VL +++    SS KTY+A+VRG G    + F  +GWF V R IK++   L+ A++ F F+ G  + +      PR  LVLA+  TGR+HQIR+HLNGLSHPI+GDS HGNS+ NRE        P  R  LH L+L L   P
Sbjct:   97 VSILDRGPNHLVVSKPPSVLCHRSDWSGSGKKRSAKQRGPPEVPMLQRAREAVGERVNLVHRLDRGASGCLLMSFAGSDENGGNATAVLQESMTRTSSSHKTYLALVRGEGILKGRDFRQEGWFEVSRPIKNEAGTLKNATSYFRFIAGQGNENGALEDVPRASLVLARIKTGRWHQIRKHLNGLSHPIIGDSTHGNSKTNREWRQKWGLEPE-RTCLHLLKLELPATP 324          
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Match: PseudoU_synth_2 (domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EHE9_EMIHU)

HSP 1 Score: 142 bits (359), Expect = 5.860e-37
Identity = 74/178 (41.57%), Postives = 104/178 (58.43%), Query Frame = 1
Query:   31 FAAICKPPLMHVHRPEFGTKDKEFVMQKARNQLGRRIFLPHRLDRGTSGCLLLGFGPEAVKVLHQALADPRSSKTYVAIVRGSGQGFVGKGWFTVDRAIKDDKKILREASTRFLFVKGGDDPDPR-------------CCLVLAQPSTGRFHQIRRHLNGLSHPIVGDSVHGNSRFNR 525
            F  + KP  + VHR ++  K    ++Q  R+QLG ++   HRLD GTSGCL+     E    L +A A  R  KTY+A+ RG+    +G+G   V+R ++DDK +LR A T  + + G D  +                 LV+A+P+TGRFHQIR+HL GLSHPI+GD+ HG+SR NR
Sbjct:   24 FCVVAKPAGLVVHRNDWSRKGDVALLQLLRDQLGTQVNPVHRLDAGTSGCLVFAEDSETTAALQRAFASGRVRKTYIAVARGNAMPTLGEG-LVVERPVRDDKGVLRAARTELMCLGGCDGEEVAGEGEAVTGRLNLGASLVVAEPTTGRFHQIRKHLGGLSHPILGDAKHGDSRVNR 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8032.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PseudoU_synth_23.710e-13456.97domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical2.740e-4943.70protein n=1 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Hypothetical7.210e-4949.06protein n=1 Tax=Leptocylindrus danicus TaxID=16351... [more]
PseudoU_synth_21.900e-4847.37domain-containing protein n=1 Tax=Fistulifera sola... [more]
PseudoU_synth_29.150e-4645.02domain-containing protein n=1 Tax=Fistulifera sola... [more]
Hypothetical1.250e-4546.15protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]
Predicted1.170e-4043.84protein n=1 Tax=Phaeodactylum tricornutum (strain ... [more]
Pseudouridine2.540e-4039.38synthase (Fragment) n=1 Tax=Fragilariopsis cylindr... [more]
PseudoU_synth_22.340e-3940.17domain-containing protein n=1 Tax=Pseudo-nitzschia... [more]
PseudoU_synth_25.860e-3741.57domain-containing protein (Fragment) n=1 Tax=Emili... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8032contigH-canaliculatus_M_contigs8032:1..2994 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G7M0
PFAMsPseudoU_synth_2
Model size1176
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue3.11e-136
EggNOG OGsCOG0564@1|root,KOG1919@2759|Eukaryota
Ec32 ortholog descriptionRNA pseudouridylate synthase domain-containing protein
Ec32 orthologEc-22_001870.1
Descriptionpseudouridine synthase activity
Cds size1176
COG categoryJ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8032.1.1prot_H-canaliculatus_M_contigs8032.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8032 1..2994 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854131.9170964-CDS-H-canaliculatus_M_contigs8032:0..351696854131.9170964-CDS-H-canaliculatus_M_contigs8032:0..35Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8032 1..35 +
1696854131.931727-CDS-H-canaliculatus_M_contigs8032:676..7561696854131.931727-CDS-H-canaliculatus_M_contigs8032:676..756Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8032 677..756 +
1696854131.943244-CDS-H-canaliculatus_M_contigs8032:1065..11631696854131.943244-CDS-H-canaliculatus_M_contigs8032:1065..1163Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8032 1066..1163 +
1696854131.9548118-CDS-H-canaliculatus_M_contigs8032:1495..15941696854131.9548118-CDS-H-canaliculatus_M_contigs8032:1495..1594Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8032 1496..1594 +
1696854131.9688737-CDS-H-canaliculatus_M_contigs8032:1911..20391696854131.9688737-CDS-H-canaliculatus_M_contigs8032:1911..2039Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8032 1912..2039 +
1696854131.9833732-CDS-H-canaliculatus_M_contigs8032:2258..29941696854131.9833732-CDS-H-canaliculatus_M_contigs8032:2258..2994Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8032 2259..2994 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8032.1.1

>prot_H-canaliculatus_M_contigs8032.1.1 ID=prot_H-canaliculatus_M_contigs8032.1.1|Name=mRNA_H-canaliculatus_M_contigs8032.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=392bp
PLEVLHLDEDFAAICKPPLMHVHRPEFGTKDKEFVMQKARNQLGRRIFLP
HRLDRGTSGCLLLGFGPEAVKVLHQALADPRSSKTYVAIVRGSGQGFVGK
GWFTVDRAIKDDKKILREASTRFLFVKGGDDPDPRCCLVLAQPSTGRFHQ
IRRHLNGLSHPIVGDSVHGNSRFNREVAAHRNPAPAGRLMLHCLRLSLAT
LPGAGSSVWKSAAGGELSSSGAAAVTAEGVYRESGIKFEHPPLVRGEGGE
VNRTRGSGGGSDEAGPSQEEGKAARVDTGGAAAAGSARKGVQTPAEPKKA
LSEASRATLGLESARAFPAEPLLDVRGETSGGEVLPSTIQGAAAAGSSGP
IDVGAGSEEGVLKGKGFRVYSEPPDDIMKFLRGMSWWEEGMI
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mRNA from alignment at H-canaliculatus_M_contigs8032:1..2994+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8032.1.1 ID=mRNA_H-canaliculatus_M_contigs8032.1.1|Name=mRNA_H-canaliculatus_M_contigs8032.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2994bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8032:1..2994+ (Hapterophycus canaliculatus Oshoro7m male)
CCTTTGGAGGTTCTTCATCTCGACGAGGACTTCGCGTAAGTACGGTGCAT GCGATATTTTACTCCTGAGAGGAATAGGCCAATCTCCGAGGCGGACGGCG ATAGATAAGCGAACACATTTGTAAAATTATCAGTGTCTCACCGGCGGGTC GCAGCACCAGAGCCCTCCTGGAAGATACCATGTTGACGTCATCCTCAGAC TCACGGCAGAAACGTTGAGAGGAAGTGACCGACAGGGGAAGCCTGGCACC AACACCTTTGCAATATGTACATGGCTGTATCAGCTAAAGTGGATGTTATA TGTCTAACGTTTGCCATCAAGCACTCTTCACAAAAACAAAAGTCTTCATG GTCTAGGGCCACGGTCAGCCAGCTTCGGCATGTTGCACGCCTTTCGTTGC CAGTTGAACACGACACCTCAAAAGCAACAAGACCGTAGTTACGCACAATA GCTACTGGCGCCTGTTGGTCGCGACAGACCCCATGTGTTTGATTTCAGTC CCCCTCCCTTACTCCCGCCTCTGTTTCTCCTTACCATGCCGAACGATTCG GTCTACATCATTTCCTTGGGTCCCCGACCGTAACGGTGCATCTTCTCGGT GGGTCGATGCCGGATCTCCTACCGTCGCTGCGACTACCACGACGACCAAC TCTTTTTTCCCCCTCCCGCCACGTAGTGCCATCTGCAAGCCGCCCCTCAT GCACGTCCATAGGCCGGAGTTCGGCACCAAGGACAAGGAGTTCGTGATGC AGAAAGGTGAATGCCCGAGTGCGCAGCCCTGGCGCCGTGCTGACGACCAC CTAGTGGCTCACGATCATCAATCGAATCCTCTGCCTTCGTAGGGAACACG CGAAGTTAGGCTAGCCACAAAGCGGCTCACGACCGTCAATCGAAGCCGTC GCCTTCGTAGGAGATACGGAACGCCAGCGCAGCACGTGCTGGTGTTTTCT GGCAGCTTTTTTCGTCGCAGAGCCCACCACCCCTTTCCTGGCGGCGTGTT CCCTTTGACTTATCCTTGCTGCCTCAACACAACCACGCGCACGCCGACCG ACCGTCGGTGCTCAGCTCGGAATCAGCTCGGGCGCCGCATTTTCCTGCCG CACCGGCTCGACCGCGGAACGTCCGGCTGCCTCCTTCTCGGCTTCGGCCC GGAGGCGGTGAAGGTGCGCCGAAGCACGATCGCGAGACTACGTAGAGCTG CTTGTGGCAGTGGCAAGGGTGGGAAGAGTGTCCCGGACTGCCTGACCGAC CAACTCGCCCCGGAAACGCTACACGCGTAGTAGTCCCTAGCCTTTTGCTG GTGAAGTCGCGCGAAAGGAAATCTCGCTCGCTGGCGTTTCGCAAGGTAGT CTGAATCCCCTCCACGTAGGGGTACGGAGTACTGTGTTCGATTTTTCGTC GCTTTTCGGTCTTGACGGCAAGCGTCGGCAATCATCGCTGCAAGCGAGCA CCCCGTGATAACGCGTGTTCGTGGCGGTTGATGACTGCCGTGTAGGTCCT TCACCAAGCGCTCGCTGATCCGAGGTCCAGCAAGACATACGTGGCGATCG TCAGGGGCAGCGGGCAGGGGTTTGTCGGCAAGGGGTGGTTCACGGTGAGA GCTCGGCACCAACCGTCGGAAAGGTGATGCTCAGACACGTGTCGCTAAGA TAATAGGTGTGGTTGTCGATTGTGTTCGCCGAGGACAGGGTGTATTCATT TTTGCCTGGCGTGTGATCATATCTTTTTGAGGTCTGACACGCGAAAGGTC GCGATGCATGGCTGTGGCAGTGGAATTACATCGCTTCGCTGCGTTAGAAA AGAGACTGCAATTTCTTCCAGGCAATCAAAGAGCAGTTCAGGACGCAACG AATATCTGAGCCCTGGGTGTGTGTGACAAGGCCATCTTGCTGCTGTTGCG CCAACGCCTAGGTGGACAGAGCAATCAAGGACGACAAGAAAATACTGAGA GAGGCATCAACGAGATTCCTTTTTGTCAAGGGAGGAGATGATCCTGATCC CAGGTGCTGCCTCGTGCTAGCGCAGCCTTCTACTGGGCGGTAAGTCAAGC CTCGGGTTTCGTCCCTCACCCATCACACGCGTGAATAACGCAGCAGCGGT CGCGACACTCTTGGGAAACCCTTTAATGAGCCAGAAGAGTGATACACCTC TCCTCCGTAGCTGATGCCTGTCGCTCTCTCCCTGTCGCCGATAAAGTGCA ACACCCGAAGCATGCCCCACCGAAAAAAAAAACGTGGAAAACCGCTCTGC CGCTTCAGGTTTCACCAGATCCGACGGCATCTGAACGGGCTCAGCCATCC GATCGTCGGCGATTCCGTGCACGGCAACAGCCGCTTCAACCGCGAGGTCG CCGCGCACCGGAACCCGGCGCCGGCCGGCCGACTCATGCTGCACTGCCTC CGGCTGTCTCTCGCGACGTTGCCGGGCGCGGGATCAAGCGTGTGGAAAAG TGCAGCCGGAGGGGAACTTTCGTCCTCGGGAGCGGCAGCAGTAACGGCGG AGGGGGTCTACCGTGAGAGCGGGATAAAATTCGAGCACCCTCCTCTCGTC CGGGGAGAAGGCGGCGAGGTAAATCGTACGAGAGGCAGCGGTGGCGGGAG CGACGAGGCGGGGCCGTCGCAAGAAGAAGGCAAGGCTGCCCGAGTCGACA CCGGAGGAGCGGCAGCAGCCGGTTCTGCTCGAAAGGGAGTTCAGACCCCC GCCGAACCGAAGAAGGCGCTTTCTGAGGCCAGCAGAGCGACCCTAGGACT TGAATCAGCCAGGGCGTTCCCCGCCGAACCGCTCCTTGATGTTCGGGGTG AAACGAGCGGGGGCGAGGTGTTGCCGTCGACCATTCAGGGTGCGGCTGCC GCTGGGAGTAGTGGTCCTATCGACGTTGGTGCGGGGTCAGAGGAGGGGGT GCTAAAGGGGAAAGGCTTTCGGGTGTACTCCGAGCCGCCAGATGACATAA TGAAGTTCTTGCGAGGCATGTCCTGGTGGGAAGAAGGGATGATT
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8032:1..2994+

>mRNA_H-canaliculatus_M_contigs8032.1.1 ID=mRNA_H-canaliculatus_M_contigs8032.1.1|Name=mRNA_H-canaliculatus_M_contigs8032.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1176bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8032:1..2994+ (Hapterophycus canaliculatus Oshoro7m male)
CCTTTGGAGGTTCTTCATCTCGACGAGGACTTCGCTGCCATCTGCAAGCC
GCCCCTCATGCACGTCCATAGGCCGGAGTTCGGCACCAAGGACAAGGAGT
TCGTGATGCAGAAAGCTCGGAATCAGCTCGGGCGCCGCATTTTCCTGCCG
CACCGGCTCGACCGCGGAACGTCCGGCTGCCTCCTTCTCGGCTTCGGCCC
GGAGGCGGTGAAGGTCCTTCACCAAGCGCTCGCTGATCCGAGGTCCAGCA
AGACATACGTGGCGATCGTCAGGGGCAGCGGGCAGGGGTTTGTCGGCAAG
GGGTGGTTCACGGTGGACAGAGCAATCAAGGACGACAAGAAAATACTGAG
AGAGGCATCAACGAGATTCCTTTTTGTCAAGGGAGGAGATGATCCTGATC
CCAGGTGCTGCCTCGTGCTAGCGCAGCCTTCTACTGGGCGGTTTCACCAG
ATCCGACGGCATCTGAACGGGCTCAGCCATCCGATCGTCGGCGATTCCGT
GCACGGCAACAGCCGCTTCAACCGCGAGGTCGCCGCGCACCGGAACCCGG
CGCCGGCCGGCCGACTCATGCTGCACTGCCTCCGGCTGTCTCTCGCGACG
TTGCCGGGCGCGGGATCAAGCGTGTGGAAAAGTGCAGCCGGAGGGGAACT
TTCGTCCTCGGGAGCGGCAGCAGTAACGGCGGAGGGGGTCTACCGTGAGA
GCGGGATAAAATTCGAGCACCCTCCTCTCGTCCGGGGAGAAGGCGGCGAG
GTAAATCGTACGAGAGGCAGCGGTGGCGGGAGCGACGAGGCGGGGCCGTC
GCAAGAAGAAGGCAAGGCTGCCCGAGTCGACACCGGAGGAGCGGCAGCAG
CCGGTTCTGCTCGAAAGGGAGTTCAGACCCCCGCCGAACCGAAGAAGGCG
CTTTCTGAGGCCAGCAGAGCGACCCTAGGACTTGAATCAGCCAGGGCGTT
CCCCGCCGAACCGCTCCTTGATGTTCGGGGTGAAACGAGCGGGGGCGAGG
TGTTGCCGTCGACCATTCAGGGTGCGGCTGCCGCTGGGAGTAGTGGTCCT
ATCGACGTTGGTGCGGGGTCAGAGGAGGGGGTGCTAAAGGGGAAAGGCTT
TCGGGTGTACTCCGAGCCGCCAGATGACATAATGAAGTTCTTGCGAGGCA
TGTCCTGGTGGGAAGAAGGGATGATT
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