mRNA_H-canaliculatus_M_contigs8005.1.2 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8005.1.2
Unique NamemRNA_H-canaliculatus_M_contigs8005.1.2
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: Peroxisomal (membrane protein 70 abcd3, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS4_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.620e-120
Identity = 190/214 (88.79%), Postives = 201/214 (93.93%), Query Frame = 1
Query:  277 LLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTPAEVYQ 918
            +LKY QSELSLRFRQRLTEHVMSKYM GF FYAVSNLDDRIANADQAITQD+ERFA S+AEL+SNITKPVLDMLIYVRRLS  VDA APATMIAYLLLSG+AL ALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGN KEKQVL  VFDKL++VTRRSERFRHSLGALDSVVAKYFA++VGWTVV+RPFVNRDHPRH +ST AEVYQ
Sbjct:   19 VLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMAELFSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQ 232          
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: ATP-binding (cassette sub-family D member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z212_9STRA)

HSP 1 Score: 337 bits (865), Expect = 1.250e-108
Identity = 169/282 (59.93%), Postives = 219/282 (77.66%), Query Frame = 1
Query:   73 MVPGPCSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTPAEVYQ 918
            MVPG  S EAG L  VAGLLL RT LD+ ML LTTT+ERAIV R+ G F  G+  FA+  VP+++VNSLLKY QSE++LRFRQRLT H+M +YM GF +Y V+NLD R+ N DQAITQD+E FAES+A+L+SN+TKP+LD+ +YVRRL+  VD  AP ++IAYLL SG+AL A+RKPT +YTALV  QEG YR+VN RL+T+A+EIAFY GN KEK VL   F  L+A+ RRS++FR+S+  +DS+ AKY A++VGW  V+RPF+N   PR  +++P+ +YQ
Sbjct:    1 MVPGVLSPEAGFLAGVAGLLLLRTYLDITMLELTTTVERAIVQRDAGSFGRGVRTFAKFMVPLSIVNSLLKYGQSEVALRFRQRLTAHIMDRYMAGFTYYGVTNLDGRLKNVDQAITQDVELFAESMADLFSNVTKPMLDICLYVRRLARRVDPLAPYSLIAYLLASGVALTAMRKPTGLYTALVQHQEGVYRHVNGRLITHAEEIAFYGGNKKEKAVLSAAFADLVALVRRSQQFRYSMAVVDSIAAKYLASVVGWLTVSRPFLNLKDPRFKDASPSVLYQ 282          
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: Long (chain acyl-CoA transporter ABC transporter n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CER2_PYTIN)

HSP 1 Score: 305 bits (780), Expect = 2.150e-95
Identity = 156/294 (53.06%), Postives = 216/294 (73.47%), Query Frame = 1
Query:   28 VDAAFLRRISRLLKVMVPGPCSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTPAE 909
            V+  FLRR  RL KV+VPG  + E G  + VA LL ARTS D+ +L + T+IERAI++R   GF   + RF  + +PVA VNSLLKY Q+EL+LRFR RLT H+   Y++GF +Y VSNLD+RI NADQ +T D+ERF+ SVAELYSN++KP+LD+ IY  +L+ ++    PATM+AYL+ SG  L  LR+PT  +T    + EG +R++NSRL+T+++EIAFY GN +EK +L   F +LI++ R+S++FR S+  +DS+VAKYFAT+VG+ VV++PF++ DHPRH  ST AE
Sbjct:   57 VNQEFLRRFLRLFKVIVPGVFTPEVGYALLVALLLAARTSFDIQILQIMTSIERAIISRSTDGFLLHLRRFLLVMLPVACVNSLLKYGQTELTLRFRDRLTRHLYDLYLKGFVYYKVSNLDNRIGNADQLLTVDVERFSHSVAELYSNVSKPLLDIAIYAVKLTSSIGFQGPATMLAYLVASGACLTWLRQPTGRFTIAEQKMEGNFRFMNSRLITHSEEIAFYNGNVREKHILDESFSRLISLLRQSQQFRFSVAVIDSIVAKYFATVVGFLVVSKPFLDLDHPRHRTSTYAE 350          
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFC8_PYTOL)

HSP 1 Score: 300 bits (769), Expect = 7.330e-94
Identity = 148/294 (50.34%), Postives = 219/294 (74.49%), Query Frame = 1
Query:   28 VDAAFLRRISRLLKVMVPGPCSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTPAE 909
            ++  FL R  RL KV+VPG  + E G    VAGLL ARTS D+++L + T+IERAI++R   GF   + RF  + +PV+ VN LLKY Q+EL+LRFR RLT H+   Y++GF +Y VSNLD+RI+NADQ +T D+ERF+ SV++LYSN++KP+LD+ IY   L+ ++    PATM+ YL+ SG+ L  LR+PT  +T    + EG +R++N+RL+T+++EIAFY GN +EK++L + F +LI + R+S++FR S+  +D++VAKYFAT+VG+ VV+RPF++++HPRH+NS+ AE
Sbjct:   57 INKEFLTRFMRLFKVIVPGLVTPEVGYAFLVAGLLAARTSFDILILQIVTSIERAIISRSTEGFMHHLRRFFLVMLPVSCVNCLLKYGQTELTLRFRNRLTRHLYDLYLKGFIYYKVSNLDNRISNADQLLTVDVERFSNSVSDLYSNVSKPLLDICIYAVELTSSIGFQGPATMLGYLVFSGMFLTWLRQPTGRFTIAEQKMEGNFRFMNARLITHSEEIAFYNGNVREKRILDQSFTRLIDLVRQSQQFRFSISVIDNIVAKYFATVVGYFVVSRPFLDKEHPRHLNSSYAE 350          
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: ATP-binding (cassette n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UCF6_CAPO3)

HSP 1 Score: 296 bits (757), Expect = 5.010e-92
Identity = 145/297 (48.82%), Postives = 214/297 (72.05%), Query Frame = 1
Query:   28 VDAAFLRRISRLLKVMVPGPCSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTPAEVYQ 918
            VD  F  R+ +LL++++PG  + E G +V VA  ++ RT  D+ M+  TT IE  I++R+  GF+ G+  F    +P++ V +LLKY  +EL+LRFR RLT H+ S+Y+RGF +Y +SNLD+RIANADQ +TQD+E+F +S+A+LYSN++KP+LD+ IY R+L+ ++ A  PA M+AYL +SG  L  LR+PT  YT    + EGE+R+VNSRL+TNA+EIAFY GN KEK V+ + F++L+ + RRS +FR  +G +DS VAKYFATI+G+TVV+RPF++    R    + +E+ +
Sbjct:   61 VDGVFFARLRKLLRIVIPGVFTPEMGFIVLVAAAMVGRTYCDLWMIKTTTAIESTIISRDAAGFREGLVHFFNALLPISCVTNLLKYGLNELALRFRTRLTNHLYSEYLRGFTYYKISNLDNRIANADQLLTQDLEKFCDSIADLYSNVSKPILDIFIYARKLAGSIGAQGPAYMLAYLAVSGAFLTRLRRPTGWYTVNEQRLEGEFRFVNSRLITNAEEIAFYNGNEKEKLVITQTFNRLVNMLRRSMQFRFGMGVIDSFVAKYFATIIGFTVVSRPFMDPTSERFKGMSHSEMME 357          
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLN4_9STRA)

HSP 1 Score: 290 bits (742), Expect = 8.250e-90
Identity = 145/294 (49.32%), Postives = 215/294 (73.13%), Query Frame = 1
Query:   28 VDAAFLRRISRLLKVMVPGPCSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTPAE 909
            V+  F  R  +L KV+VPGP + E      VA LL ARTS D+++L + T+IERAI++R    F   + RF  L +P++ VN LLKY  +EL+LRFR RLT+H+   Y++GF +Y VSNLD+RI+NADQ +T D+ERF+ SVA+LYSN++KP+LD++IY  +L+ ++ A  PATM+AYL++SG+ L  LR+PT  +T    + EG +R++NSRL+T+++EIAFY GN +EK++L   F +LI + R+S++FR S+  +D++VAKY AT+VG+ VV++PF++   PRH+ ST AE
Sbjct:   57 VNKEFYLRFVKLFKVIVPGPFTAEVAFAALVAALLAARTSFDIMVLQIITSIERAIISRSTEDFTRHLRRFFVLMLPMSCVNCLLKYGHTELTLRFRNRLTKHLYKHYLKGFIYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNLSKPMLDIVIYSAKLTSSIGAQGPATMLAYLVVSGMFLTWLRQPTGRFTIAEQKMEGNFRFMNSRLITHSEEIAFYNGNVREKKILDESFARLIDLVRKSQQFRFSVSVIDNIVAKYLATVVGFLVVSKPFLDMSDPRHLKSTYAE 350          
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: Uncharacterized (protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3GA94_PHYRM)

HSP 1 Score: 286 bits (732), Expect = 8.310e-89
Identity = 143/294 (48.64%), Postives = 214/294 (72.79%), Query Frame = 1
Query:   28 VDAAFLRRISRLLKVMVPGPCSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTPAE 909
            V+  F RR  RL KV++PGP + E G    VA +L+ARTS D+V+L+  T IERAI++R +  F   + RF  + +P++ VNSLLKY  +ELSLRFR RLT H+  +Y++GF +Y VSNLD+RI+NADQ +T D+ERF+ SVA+LYSN++KP+LD+ IY  +LS T+    P  M++YL+ SG  L  LR+PT+ +T    Q EG +R++NSRL+T+++EIAFY GN +EK++L + F +LI + R S++FR S+  +D++VAKY AT+VG++V+++PF++  + R  ++T AE
Sbjct:   13 VNKEFYRRFLRLFKVIIPGPFTAEVGFAALVAVMLVARTSFDIVVLHTFTAIERAIISRSQTEFLRHLRRFVAIMLPMSCVNSLLKYGHTELSLRFRTRLTRHLYEQYVKGFVYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNMSKPILDIAIYAVKLSSTIGVEGPVIMLSYLVASGFFLTWLRQPTSRFTIAEQQMEGNFRFMNSRLITHSEEIAFYNGNVREKRILDQSFSRLIDLVRSSQQFRFSMSVIDNIVAKYLATVVGYSVLSKPFLDMSNKRLEHTTYAE 306          
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E539_BRELC)

HSP 1 Score: 287 bits (734), Expect = 1.180e-88
Identity = 145/294 (49.32%), Postives = 212/294 (72.11%), Query Frame = 1
Query:   28 VDAAFLRRISRLLKVMVPGPCSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTPAE 909
            +D  F  R  RL KV+VPGP + E G    VA +L+ARTS D+V+L+  T +E+AI++R +  F   + RF  + +P++ VNSLLKY  +EL LRFR RLT+H+  +Y++GF +Y VSNLD+RI+NADQ +T D+ERF+ SVA+LYSN++KP+LD+ IY  +LS T+    P  M++YLL SG  L  LR+PT+ +T +  Q EG +RY+NSRL+T+++EIAFY GN +EK++L + F +LI + R S++FR SL  +D+VVAKY AT+VG  V+ARP+++  + R  NS+ A+
Sbjct:   57 IDRKFYYRFLRLFKVIVPGPFTAEIGFAALVACMLVARTSFDIVLLHAFTAVEKAIISRSQTEFMVHLRRFVAIMLPMSCVNSLLKYGHTELCLRFRTRLTQHLYGQYVKGFVYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNMSKPILDIAIYAIKLSSTIGVEGPIVMLSYLLASGFFLTYLRQPTSQFTIVEQQMEGTFRYMNSRLITHSEEIAFYNGNVREKRILEQSFHRLINLVRSSQQFRFSLSVIDNVVAKYLATLVGCAVLARPYMDISNKRLGNSSYAD 350          
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: ABC (transmembrane type-1 domain-containing protein n=2 Tax=Salmonidae TaxID=8015 RepID=A0A6F9CM44_9TELE)

HSP 1 Score: 277 bits (708), Expect = 1.890e-88
Identity = 142/295 (48.14%), Postives = 204/295 (69.15%), Query Frame = 1
Query:   19 RPRVDAAFLRRISRLLKVMVPGPCSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTP 903
            R  VD  F  RIS+++++MVP     E G L+ +A +L+ART  DV M+   T IE AI+ R    FK  +  F ++   +A+VN+ LK   +EL LRFR RLT+H+  +Y++G+ +Y + NLD+RIANADQ +TQD+ERF  SV +LYSN++KP+LD+ +Y+ +L+  + A  PA+M+AYLL+SG+ L  LR+P    T    + EGEYRYVNSRL+TN++EIAFY GN +EKQ +   F KL+    +   FR S+G +DS++AKY AT+VG+ VV+RPF+N   PRH+NS+P
Sbjct:   57 RAAVDYVFFLRISKIIRIMVPRWFCKETGYLLLIAAMLVARTYCDVWMIQNGTMIESAIIGRSNTDFKNYLFNFCKVMPLIALVNNFLKLGLNELKLRFRVRLTKHLYDEYLKGYTYYKMGNLDNRIANADQLLTQDVERFCNSVVDLYSNLSKPLLDIGLYIFKLTSAIGAQGPASMMAYLLISGLFLTRLRRPIGKMTVTEQRYEGEYRYVNSRLITNSEEIAFYNGNMREKQTIHSTFKKLVDHLHKFIFFRFSMGFVDSLIAKYIATVVGYLVVSRPFLNLADPRHMNSSP 351          
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Match: Atp-binding (cassette sub-family d member 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B4X7_PLAHL)

HSP 1 Score: 286 bits (731), Expect = 3.300e-88
Identity = 144/297 (48.48%), Postives = 212/297 (71.38%), Query Frame = 1
Query:   28 VDAAFLRRISRLLKVMVPGPCSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAESVAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKLIAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNSTPAEVYQ 918
            V+  F +R  RL KV+VPGP + E      VA +L+ARTS D+V+L   + IE AI++R +      + RF  + +P++ VNSLLKY  +ELSLRFR RLT H+  +Y++GF +Y VSNLD+RI+NADQ +T D+ERF+ SVA+LYSN++KP+LD+ IY  RLS ++    P  M+ YL+ SG  L  LR+PT+ +T    Q EG +RY+NSRL+T+++EIAFY GN +EK++L + FDKLI V R S++FR S+  +D++VAKYFAT+VG+ V+++P+++  + R +N++ AE  Q
Sbjct:   57 VNKEFYQRFLRLFKVIVPGPFTAEVAFAALVAVMLMARTSFDIVVLQTFSAIESAIISRSQKDLMCHLRRFVAIMLPMSCVNSLLKYGHTELSLRFRTRLTRHLYEQYVKGFVYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNMSKPILDITIYFIRLSSSIGVEGPVIMLTYLIASGFFLTWLRQPTSRFTIAEQQMEGNFRYINSRLITHSEEIAFYNGNIREKRILDQSFDKLIDVVRSSQQFRFSISVIDNIVAKYFATLVGYAVLSKPYLDSSNKRLLNTSYAERMQ 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8005.1.2 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Peroxisomal2.620e-12088.79membrane protein 70 abcd3, putative n=1 Tax=Ectoca... [more]
ATP-binding1.250e-10859.93cassette sub-family D member 3 n=1 Tax=Tribonema m... [more]
Long2.150e-9553.06chain acyl-CoA transporter ABC transporter n=2 Tax... [more]
Uncharacterized7.330e-9450.34protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
ATP-binding5.010e-9248.82cassette n=1 Tax=Capsaspora owczarzaki (strain ATC... [more]
Uncharacterized8.250e-9049.32protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Uncharacterized8.310e-8948.64protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3G... [more]
Uncharacterized1.180e-8849.32protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A... [more]
ABC1.890e-8848.14transmembrane type-1 domain-containing protein n=2... [more]
Atp-binding3.300e-8848.48cassette sub-family d member 3 n=1 Tax=Plasmopara ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8005contigH-canaliculatus_M_contigs8005:9..4694 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FQS4
Preferred nameABCD3
PFAMsABC_membrane_2,ABC_tran
Model size918
Max annot lvl2759|Eukaryota
KEGG koko:K05677
KEGG TC3.A.1.203.1
KEGG Pathwayko02010,ko04146,map02010,map04146
Hectar predicted targeting categorysignal anchor
GOsGO:0000038,GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005324,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0005782,GO:0005829,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006635,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006996,GO:0007031,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009653,GO:0009987,GO:0010033,GO:0010876,GO:0014070,GO:0015399,GO:0015405,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0015910,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019395,GO:0019752,GO:0022804,GO:0022857,GO:0030258,GO:0030554,GO:0030587,GO:0031090,GO:0031224,GO:0031231,GO:0031288,GO:0031300,GO:0031301,GO:0031903,GO:0031907,GO:0031974,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033036,GO:0034440,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042579,GO:0042623,GO:0042626,GO:0042760,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043190,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043492,GO:0043621,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046394,GO:0046395,GO:0046942,GO:0046983,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0055114,GO:0070013,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072330,GO:0090702,GO:0097159,GO:0097367,GO:0098533,GO:0098588,GO:0098796,GO:0098797,GO:0098805,GO:0099120,GO:1901265,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1902495,GO:1904949,GO:1990351
Exons8
Evalue4.3e-121
EggNOG OGsCOG4178@1|root,KOG0060@2759|Eukaryota
Ec32 ortholog descriptionABC transporter type 1, transmembrane domain
Ec32 orthologEc-01_000320.1
DescriptionATP-binding cassette sub-family D
Cds size918
COG categoryG
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8005.1.2prot_H-canaliculatus_M_contigs8005.1.2Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8005 9..4694 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854130.329176-CDS-H-canaliculatus_M_contigs8005:8..441696854130.329176-CDS-H-canaliculatus_M_contigs8005:8..44Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8005 9..44 +
1696854130.3419266-CDS-H-canaliculatus_M_contigs8005:898..9741696854130.3419266-CDS-H-canaliculatus_M_contigs8005:898..974Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8005 899..974 +
1696854130.3574774-CDS-H-canaliculatus_M_contigs8005:1519..16831696854130.3574774-CDS-H-canaliculatus_M_contigs8005:1519..1683Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8005 1520..1683 +
1696854130.3712232-CDS-H-canaliculatus_M_contigs8005:2327..24651696854130.3712232-CDS-H-canaliculatus_M_contigs8005:2327..2465Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8005 2328..2465 +
1696854130.3812895-CDS-H-canaliculatus_M_contigs8005:2841..29521696854130.3812895-CDS-H-canaliculatus_M_contigs8005:2841..2952Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8005 2842..2952 +
1696854130.3920138-CDS-H-canaliculatus_M_contigs8005:3179..32501696854130.3920138-CDS-H-canaliculatus_M_contigs8005:3179..3250Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8005 3180..3250 +
1696854130.4238436-CDS-H-canaliculatus_M_contigs8005:3977..40661696854130.4238436-CDS-H-canaliculatus_M_contigs8005:3977..4066Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8005 3978..4066 +
1696854130.4399037-CDS-H-canaliculatus_M_contigs8005:4461..46941696854130.4399037-CDS-H-canaliculatus_M_contigs8005:4461..4694Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8005 4462..4694 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8005.1.2

>prot_H-canaliculatus_M_contigs8005.1.2 ID=prot_H-canaliculatus_M_contigs8005.1.2|Name=mRNA_H-canaliculatus_M_contigs8005.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=306bp
RERPASRPRVDAAFLRRISRLLKVMVPGPCSLEAGCLVAVAGLLLARTSL
DVVMLNLTTTIERAIVAREKGGFKAGMSRFARLCVPVAVVNSLLKYFQSE
LSLRFRQRLTEHVMSKYMRGFNFYAVSNLDDRIANADQAITQDIERFAES
VAELYSNITKPVLDMLIYVRRLSHTVDAAAPATMIAYLLLSGIALGALRK
PTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLRRVFDKL
IAVTRRSERFRHSLGALDSVVAKYFATIVGWTVVARPFVNRDHPRHVNST
PAEVYQ
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mRNA from alignment at H-canaliculatus_M_contigs8005:9..4694+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8005.1.2 ID=mRNA_H-canaliculatus_M_contigs8005.1.2|Name=mRNA_H-canaliculatus_M_contigs8005.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4686bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8005:9..4694+ (Hapterophycus canaliculatus Oshoro7m male)
CGAGAGCGCCCTGCTTCTAGGCCGAGGGTTGACGCGGTGAGTCGTCTTCG AAAATTGGTAGAGTTCGATGAGTTCAGGATGCTCCTTGGACAAGAGCAAG CGACGAGCAACACCAACTTTCTTACAGCACAGACCTACAGCATCTACCGT TTCAGTACGGACCTACAGCATGTCCTGCTGTTTCGGTCGGTCATGTACAC ATGCCGTTGCGTAGCTTGTAGCCTGCTGTGTCGCCTAATGGGGATGTTCT TGTTCGCTCCCGCAGGACATCAGTCGCAAGAGGCAGAAGCTCGTACCTTG TACGCGTAAAGCGTGTGTGAAACTTTGCTGGCCGTTGCTTTGCGGCGTTT GTTTGGTCTCGCCTGCCTTCTCCAATTGTGGTGAGAAGTCCTTGAAGTAT ATTTCCTTTCTCGTACCTTTCTGGTGTACGAGAAAGGAGAACCCGCGGGT CCTGATGTCCTTCCAAGTTGTACACAGCACTCGGGTTCTCAAGAGATTGT GCTGCTGTTTAGCTGTTGCCCTCGAAGTAAACACCCGAAAATGTTTCCAT CTCCCATCTGCCATCCTTCATGTCGATGGGGTTGAACCTACCCACAAGTT GCATCAGAGGTCATGTGGTATGAGCCGTACAAAAGGTGTGCGTCGTGCAC ATTATCTCCGACCTGGTATGGCCTATCCCTGTACTAGGTTGGACCTTGGT GGCACCCGTTCATGTAACTACCTGGTACGTTAGTTACGGGGGCGAAATAC CACTAGTTCCTTTCGAGCGGTCCGCCAGCACAAGCACAAAGGCGCGTTCT ACTGTACCGCTGGACTGCTGCACAGATACAATTGCATGGCTGTTCGGGCT TCCCAAAAACATTTATGATCGTCCCTCCTCCCTGCTTCAGGCTTTCCTTC GGCGTATTTCGCGCTTGCTCAAGGTCATGGTGCCCGGTCCCTGCTCGCTC GAAGCGGGTTGCTTGGGTGAGCCTCCTGCATGCTGCACGTACATGCAGAG TTATTCGGAGCTCTTCTGCCCCAAGAACGATGCGTTGTCTAGTGATCATG ACCATGATAATTTCTTGGCCGAAAGGAGGTGTCTGGTACTTGTGTGGACC GAAGGATATATCTGGCCAGAAGCAAGTGGCCGGTTCTCTCAGGGCCGAAC TGGTTTACTTGGGTACTTCAAGTCGCAGGTTCAGAGCTGCCCCGGCATCA CCGTTCTCCATTCGATTTTCTAGCCTTCATGTTCAATCGTGTCGAACTTC TCTGATCGCAGCTTTTTTAGCTTCGTCTCGTTTCCCGCCTGTTGGGAACC AATACGACTTTCTTCTTTCAAACTCATGGTTGCTCCGGATTGCCGCGTCG TTCCAAAACTTGGAAGTGGAATAATCGCATTTTGTCCATCGCCCAGCGAT ATTTTTGATGGCACACGCCCTCCGTTTCTTCCGTTTCTTCCTTCTGGTGT TCTACTCCCCGCACCACGTCCCTCCCTACCCGTCCAACACCAAACGAACG CACGCACGCAGTGGCCGTCGCGGGGTTGCTCTTGGCGAGGACGTCCCTCG ACGTCGTGATGCTCAACCTCACGACCACCATCGAGCGCGCCATCGTAGCG AGAGAAAAGGGCGGCTTCAAAGCCGGGATGTCTCGCTTTGCGAGGCTGTG CGTTCCCGTGGCGGTTGTCAACTCGGTGAGGCTTAAGAGGAGACTTGGGA GGAGACGAGAGGAAAGGATGAGACTTACGAGGAGACTGCAGAAGGGGGGA GGCAAAGAGTCGATCTTGAGGACGAGAGCTTTTTTCTCATGGGCGTCAAG TGCATGCCATATGGTGTGATTGTGTCTGGTGGGAACGGGTCGAGGAACTC GGTGCATGTTTTCTGTTAATGGGGTTTAGGTACGTGGTGCACGTCCACCC CAGCCAGTGCCCGACAAGTAGATGCACTGGGCAGGCAGGGTATCTTCCGT GGGCGAACTACGTTGCCCGTTTGAAAGAGGACCTTGTCTGCTGGATCAAT TGTTTGCTTGTGTGAACAAGGCTGTTTCGTCTGAGATACCCATACATGCG GAATCGCTGGTATTGCTAACTAATCGAGGGCGATGAAGATTATCGCGAAA CAACCCCCCAATGCTCCGCGATGGTGCAGCAGCAGTTTGGATGATTTGCG ACGTGTTGAGGGCAGACTCTGCAATGCAGAGCTGTTGCTGGAAGGAGGGC ATTGCGTTAACGTGGTAAGAACGACGAAGACACCACCGATGGCAACGGCG ACAGCAGCATCAGTAACACAGGTAGGAGCTAACACAAAAAGACGATTCTC GTATCTGTGGAACGTGCAGCTGCTCAAGTACTTCCAATCGGAGCTGTCCT TGCGGTTCCGGCAACGGCTGACCGAGCACGTCATGTCCAAGTACATGAGG GGCTTCAACTTTTACGCAGTGTCAAACTTGGATGACCGGATCGCTAACGC TGACCAGGTGTGTACCGTACGCCAGCCGTGTATAACGATGGCAGGCGGTT AAATAAACAGTACCATGCAAGAAGTGACGTAGACGATGCCTGATGCATGT GCTCTTCGTTGGAGGCTTGCGGTCGGGCGTTGTCGGAGCTGTGACTTGCC GTCCTGTCCGCTGTTTGCATGAGTTTGCCACAGGTTCGTAGGGGAGCACT TGAAAAAAATTATCTGGAAAGCATCTCCCCAGCACACGCGCTCCACATGG CTCAGCTCCTGCCCTCCCCAGGTGTTAGTCTGCAAACTAACGTGCACCTC TCGCTTGCCATGCGCAACGTACCAACACCGTCGATCCTTTTCCCATTGAT CTCGTATTCGTCCCGCCGCTGTGGCTGTGGCAGGCCATCACTCAAGACAT TGAGCGCTTTGCGGAGTCCGTGGCGGAGTTGTATTCCAACATAACCAAGC CGGTTTTGGATATGCTGATCTACGTGCGCAGACTTTCTCACACGGTCAGT GCCACGAGCGACTAGAGCGATCAGCGAAGAGCAATATTAGTAGTGGTTCT CCGGTCGTTTAGCCTGCGTGAGGTGCATCAGCTACCTCCCCCATAACAGC GACTCTAGGTGCTTCCGTAGATGGGCGCACAACGAAAGGATCACCATATT TCCAGCCACATCCGCTCCCGTGCTAGACCGCATCAGCTCTCCCGGTTGAT GCAAATGTTCAATCTTGGCAGGTTGATGCTGCGGCGCCAGCGACGATGAT AGCGTACCTCCTTCTGTCGGGGATAGCTCTCGGGGCACTCAGGTAACAGA CAGGCCCTACTTCCAGATGGGTATTCGCCGCCTCTCGAATCTATATGCAT TGGTGAACAGCAGAGGTGTCTTGAGATGACGATTCTCGCCGTTGGCATCT CGTTTTCAACCGCGTAATCAAGGCAACGAATAGAGTAGATTCTAGATCCG GAATCGCATTTGTAGGTGGAAACTGTACTTTGGTGTCCAGAGGAATTTTC GTTGGTGCCGGCACCGTTTCTTTGCGGTCCGTTATCGTGCGGTGTCGCCT ACGTACGTACAGCGACGATTATGATAACATCCGAGTTTAACGTGTGTGCC AGATACAGCTATCACTGCGTCTGACGTTAAACTTTCGGAGTGCGGGGAAA TCTGGAAGCCGGGATATAACGCAACGGAGTTTTCGAGGCGCCAGAAGAAA ATCCATTGACCAAGTAGTGCCAGCCTTCATCAGCCGTCGTCGCGCCTCCG CACACCTCGCCGTGATCGTCGCGCCTCCGCACACTTCGCCGTGATCGATG CTGAACTACGAACGACGAGGCACTTTACTACGTAAGGGACGCCTTTTGAG TTTATTTGTTAAGCTTCGTGCCTTCTCGGGCCTTCTTGGGAGGGTGAGGA AGGCAGGCGCCTTTGCCGTTGGCGTGCCCCCCCAAAACGAAAACACTGAC CGGACCCGTTGGCTCTCTTTACCGTCGCCTTCCAAACCCCTCGTGGCTTT CCCCCCCCTTTTTTCCCAGAAAACCCACCGCTATGTATACGGCATTGGTG GCGCAACAAGAGGGCGAGTATCGCTACGTCAACAGCCGGCTGCTCACCAA CGCGCAAGGTTTGCCAGCAGGATGGAGTCGTTGTCTGACCCGTTCCTGAG TCCGCTGCGCCTCTCTCTTGCCGCCCCGGAGGACGCTTTAGACGTTCCCC TCGCGCTGTGCAGTTTGTATCGGCCTAGGGGCACAAGGGCCGGGTTAGCG CGGTTGCTGGGAGGTCTGGGAGGGAGGTCGAGCTAGCGCCCCTATCGCAC CCCGCCATGACAGCAGACCTCGAACACGGTGGAGAAGCCTTGCGCATTGC GCGTACCGTCTGCACGTATCCTCTCTCAAACTCTGGTCCTCTTTCAAGCG CTGATCCACCCGCCCTTCACACGGCTGCTCCTGCCGCTGCTGCTGGCACC GCCACCCACGCTCGCGGCCGCTTGTTCTGCTGCTGCTGCTGCGGCTACTG CAGAAATCGCCTTCTACAAGGGTAACGCCAAGGAGAAGCAGGTGCTGCGA CGGGTGTTCGACAAGCTGATCGCGGTCACCAGGCGGTCCGAGCGGTTCCG ACATTCCTTGGGGGCCCTTGACTCGGTGGTGGCTAAATATTTTGCCACGA TTGTGGGCTGGACGGTGGTCGCTCGGCCGTTCGTAAACCGGGACCACCCG AGGCATGTCAACAGCACGCCCGCGGAGGTATATCAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8005:9..4694+

>mRNA_H-canaliculatus_M_contigs8005.1.2 ID=mRNA_H-canaliculatus_M_contigs8005.1.2|Name=mRNA_H-canaliculatus_M_contigs8005.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=918bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8005:9..4694+ (Hapterophycus canaliculatus Oshoro7m male)
CGAGAGCGCCCTGCTTCTAGGCCGAGGGTTGACGCGGCTTTCCTTCGGCG
TATTTCGCGCTTGCTCAAGGTCATGGTGCCCGGTCCCTGCTCGCTCGAAG
CGGGTTGCTTGGTGGCCGTCGCGGGGTTGCTCTTGGCGAGGACGTCCCTC
GACGTCGTGATGCTCAACCTCACGACCACCATCGAGCGCGCCATCGTAGC
GAGAGAAAAGGGCGGCTTCAAAGCCGGGATGTCTCGCTTTGCGAGGCTGT
GCGTTCCCGTGGCGGTTGTCAACTCGCTGCTCAAGTACTTCCAATCGGAG
CTGTCCTTGCGGTTCCGGCAACGGCTGACCGAGCACGTCATGTCCAAGTA
CATGAGGGGCTTCAACTTTTACGCAGTGTCAAACTTGGATGACCGGATCG
CTAACGCTGACCAGGCCATCACTCAAGACATTGAGCGCTTTGCGGAGTCC
GTGGCGGAGTTGTATTCCAACATAACCAAGCCGGTTTTGGATATGCTGAT
CTACGTGCGCAGACTTTCTCACACGGTTGATGCTGCGGCGCCAGCGACGA
TGATAGCGTACCTCCTTCTGTCGGGGATAGCTCTCGGGGCACTCAGAAAA
CCCACCGCTATGTATACGGCATTGGTGGCGCAACAAGAGGGCGAGTATCG
CTACGTCAACAGCCGGCTGCTCACCAACGCGCAAGAAATCGCCTTCTACA
AGGGTAACGCCAAGGAGAAGCAGGTGCTGCGACGGGTGTTCGACAAGCTG
ATCGCGGTCACCAGGCGGTCCGAGCGGTTCCGACATTCCTTGGGGGCCCT
TGACTCGGTGGTGGCTAAATATTTTGCCACGATTGTGGGCTGGACGGTGG
TCGCTCGGCCGTTCGTAAACCGGGACCACCCGAGGCATGTCAACAGCACG
CCCGCGGAGGTATATCAA
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