mRNA_H-canaliculatus_M_contigs7942.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U7_9PHAE) HSP 1 Score: 446 bits (1147), Expect = 1.110e-148 Identity = 255/296 (86.15%), Postives = 262/296 (88.51%), Query Frame = 1
Query: 1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAP--------GERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 864
YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGY+VDPKGDFAVKGSKG XXXXXXXXXX G KPGDWECPSCGNNCFASK AC RCG +KP PG A+PK KNGS+ XXXXXXXXXX ERPT+G+IK RY GFSDHVHQSLLV DES+INYEAISSLLEYIT NFEEGAILVFLPGLAEITKMLEALAGNPLFNDK
Sbjct: 284 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYVVDPKGDFAVKGSKG---XXXXXXXXXXRVSGMKPGDWECPSCGNNCFASKSACYRCGTAKPTPGGAKPKGKNGSRXXXXXXXXXXXXXXXXXXXXXXXXXGAERPTIGEIKNRYAGFSDHVHQSLLVVDESMINYEAISSLLEYITYNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 576
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J2_ECTSI) HSP 1 Score: 447 bits (1150), Expect = 6.090e-144 Identity = 262/300 (87.33%), Postives = 268/300 (89.33%), Query Frame = 1
Query: 1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXX----GAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAP--------GERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 864
YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGY+VDPKGDFAVKGSKGGXXXXXXXXXXXXXXX G KPGDWECPSCGNNCFASK AC RCG +KP PG A+PK KNGS XXXXXXXXXX ERPT+G+IKKRY GFSD+VHQSLLV DESVINYEAISSLLEYIT NFEEGAILVFLPGLAEITKMLEALAGNPLFNDK
Sbjct: 354 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYVVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXXKGSGMKPGDWECPSCGNNCFASKSACYRCGTAKPTPGSAKPKGKNGSXXXXXXXXXXXXXXXXXXXXXXXXXXGAERPTIGEIKKRYAGFSDNVHQSLLVVDESVINYEAISSLLEYITHNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 653
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z857_9STRA) HSP 1 Score: 274 bits (701), Expect = 3.400e-80 Identity = 157/290 (54.14%), Postives = 180/290 (62.07%), Query Frame = 1
Query: 1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFNDKVR 870
YQIRLESKRS TRLLLCTTGILLRRLQ+DPWL++VSHVFVDEVHERDLDTDFLLI+L+ LL KRP LK+VLMSATLNA +FSD+F APV+EIPGR HPVTPF+LEDVLERTGY VDP+G FA K +GG K G E P RPT+G+ K G+S ++L V DESVI YE I+ LLEYI NF++GA+LVF+PGLAEITKMLE LA NP+FND R
Sbjct: 828 YQIRLESKRSNRTRLLLCTTGILLRRLQIDPWLSTVSHVFVDEVHERDLDTDFLLILLRELLYKRPSLKMVLMSATLNAQVFSDYFDNAPVLEIPGRTHPVTPFYLEDVLERTGYTVDPRGLFAYKPPRGGP----------------KGGGGEAP-------------------------------------------------------RPTVGEWKGLLPGYSRGTVENLAVIDESVICYEVIALLLEYICKNFDQGAVLVFMPGLAEITKMLEQLAQNPMFNDSAR 1046
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Helicase (ATP-binding domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SPX4_THAOC) HSP 1 Score: 219 bits (557), Expect = 1.640e-62 Identity = 136/287 (47.39%), Postives = 158/287 (55.05%), Query Frame = 1
Query: 1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFND 861
Y IRL+SKRS TRLLLCTTG+LLRRLQ DP LASVSHVFVDEVHERDL+TDFLLIILK LL +RP LKLVLMSATLNA+ FS++FGG P V IPGRA PV + LED LE TG++V D A K ++GG ER + +K+ Y G+S +V SL VADE+VINY I+ LLEYI TN E+GAILVFL G+ EIT LEA+ F D
Sbjct: 469 YSIRLDSKRSDKTRLLLCTTGVLLRRLQCDPDLASVSHVFVDEVHERDLNTDFLLIILKDLLERRPSLKLVLMSATLNAERFSEYFGGCPTVSIPGRAQPVKEYRLEDALEVTGHLVREGSDNAKKSARGGQKDE---------------------------------------------------------------------------ERLSKTALKRMYHGYSKNVVDSLAVADEAVINYVLIAELLEYICTNLEDGAILVFLSGMKEITTCLEAINTFEYFED 680
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBY0_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.910e-57 Identity = 128/288 (44.44%), Postives = 155/288 (53.82%), Query Frame = 1
Query: 1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 864
Y IRLE+KRS TRLLLCTTGILLRRLQ DP LASVSHVFVDEVHERD++TDFLLIILK LL +R GLKL+LMSATLNAD FS +FGG P + IPGR HPV LED+L TG+ + D+A+K G P +K+ +K+ Y V SL +ADES++NYE I++LLE+I N EEGAILVF+PG+ EITK +E L +F D+
Sbjct: 812 YSIRLENKRSAKTRLLLCTTGILLRRLQCDPDLASVSHVFVDEVHERDINTDFLLIILKDLLRRRKGLKLILMSATLNADTFSTYFGGCPTISIPGRTHPVQENRLEDILALTGHEIKAGSDYALKKRSHG--------------------------------------------------TSPFSKS----------------------------DLKRMYPNHDSKVISSLAIADESIVNYELIAALLEHIVLNGEEGAILVFMPGMMEITKTIEELCKKGVFADE 1021
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZV4_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.740e-54 Identity = 128/285 (44.91%), Postives = 151/285 (52.98%), Query Frame = 1
Query: 1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLF 855
Y I+LE K S TRLLLCTTG+LLRRLQ DP LASVSH+FVDEVHERDL+TDFL+IILK LLA+R LKLVLMSATLNAD FS +FGG PVV I GRA+PV LED+LE TGY V+ GD+A+K G RP + S + + Y +S SL + DE+VINYE I+ LLE+I+ N EGAILVF PG AEITK +E + F
Sbjct: 1246 YSIKLEKKMSAKTRLLLCTTGVLLRRLQCDPDLASVSHIFVDEVHERDLNTDFLIIILKDLLARRKNLKLVLMSATLNADSFSSYFGGCPVVSIAGRAYPVQENRLEDILELTGYSVEEGGDYALK----------------------------------------------------TGPNRPVKMSKSALR-------------------------RLYYPKYSKETIHSLSIVDENVINYELIAELLEHISLNQGEGAILVFCPGFAEITKTIEEMYKKEYF 1453
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMV8_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.210e-54 Identity = 122/286 (42.66%), Postives = 156/286 (54.55%), Query Frame = 1
Query: 1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRY-GGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLF 855
Y I+LE K SK TRLLLCTTG+LLRRL DP LA++SHVFVDEVH+RD+ TDF+LIIL+ LL +R GLK++LMSATLNA FSD+FGG VV IPGR HPV F LED+L+ TG+ +D +FA K K D SK + EA+ + ER + +K+ Y ++ V SL V DES++NYE ++ LLE+I EEGAILVF+PG+ EITK ++ F
Sbjct: 83 YSIKLEKKMSKHTRLLLCTTGVLLRRLMGDPDLAAISHVFVDEVHQRDVQTDFILIILRELLKRRKGLKVILMSATLNAAAFSDYFGGCAVVSIPGRTHPVQEFRLEDILQETGHEIDEDSEFAAK----------------------KKSD----------------------SKRRENEAKGE-------------------------ERLSKTALKRLYYPKYNSQVIHSLSVVDESLVNYELLARLLEHICMTKEEGAILVFMPGMMEITKAIDEARKKEFF 299
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG42_9STRA) HSP 1 Score: 196 bits (499), Expect = 7.970e-54 Identity = 118/270 (43.70%), Postives = 158/270 (58.52%), Query Frame = 1
Query: 43 LLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDH-VHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNP 849
+LLCTTG+LLRRLQ D L++VSHVFVDEVHERDL+TDFLLIIL+ LL +RP LKLVLMSAT+N+++FS +F GAP+V+IPGRAHPVTPFFLED+L +TGY VDP+G+F+V+ + G + + G R G I +R G +++ + G D V +SL + +E INYE +++L+ +I N EGAIL+F+PGLAEI + AL G+P
Sbjct: 1 MLLCTTGVLLRRLQCDAHLSTVSHVFVDEVHERDLNTDFLLIILRDLLRRRPTLKLVLMSATMNSEVFSQYFDGAPIVDIPGRAHPVTPFFLEDILAQTGYRVDPRGEFSVEST--------------------------------------------GTNSRRKGRRRDSEAEGPTIHI----------------DRSPEG-LRRDFPGVRDAGVLESLRLVEEDEINYEMVAALVAHINENEAEGAILIFMPGLAEIQNCVMALNGHP 209
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: p-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EIR8_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.230e-53 Identity = 127/286 (44.41%), Postives = 151/286 (52.80%), Query Frame = 1
Query: 1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGG-FSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLF 855
Y I+LE K S TRLLLCTTG+LLRRLQ DP LASVSH+FVDEVHERDL+TDFL+IILK LLA+R LKLVLMSATLNAD FS +F G PVV IPGRAHPVT LED+L+ TGY+V+ GD+AVK K + PK + +++ Y +S QSL + +E INYE +S LLE+I+ N EGAILVF PG EI K +E L F
Sbjct: 90 YSIKLEKKMSNKTRLLLCTTGVLLRRLQCDPDLASVSHIFVDEVHERDLNTDFLIIILKDLLARRKDLKLVLMSATLNADSFSGYFSGCPVVSIPGRAHPVTENRLEDILQLTGYVVEEDGDYAVK---------------------------------------------------KKDKRPPKISKSA---------------------------LRRLYHPKYSRETIQSLSIVNECKINYELLSELLEHISFNQGEGAILVFCPGFQEIQKTIEELYKKEYF 297
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWY0_9STRA) HSP 1 Score: 186 bits (473), Expect = 7.780e-50 Identity = 133/331 (40.18%), Postives = 176/331 (53.17%), Query Frame = 1
Query: 1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPG---LKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKG--------GXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASK-PKPGEAR--PKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYIT-----------TNFEEG---------------------AILVFLPGLAEITKMLEALAGNPLF 855
Y IRLESK + TRLL CTTGILL+RL+ D L +V+HVFVDEVHER +++DFLL++L+ L+ KRP LK+VLMSATL+A +F D+F AP V+ PGR PVT +LED LE TG+ V D+ KG G XXXXXX KPGDW CPSC N FA K AC +CG K K G+A+ P+A G+ + P ++ +RY S VHQ+L D + I+Y+ + + +++ N + G A+LVFLPG+ EIT + E L +P F
Sbjct: 284 YTIRLESKATPNTRLLFCTTGILLKRLEEDETLTNVTHVFVDEVHERSIESDFLLMVLRDLIPKRPDRSPLKVVLMSATLDASLFHDYFWDAPSVKFPGRTFPVTELYLEDALEVTGHSVRGNEDWCRKGGGGFSXXXXXXXXXXXXXKSRPPREDPNKKPGDWTCPSCQANNFARKTACFKCGMPKGAKAGDAKAPPQASRGNAAPTREDPRLVPLPDRDDEYLNPM--ELSERYSKHSPRVHQTLQKLDHNAIDYDLVVQTIAWLSGLPSPRHAAKYLNKKGGGQKVQKQPDDSGLGSQDTTSLAVLVFLPGIKEITTLHEMLLSSPTF 612 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7942.1.1 >prot_H-canaliculatus_M_contigs7942.1.1 ID=prot_H-canaliculatus_M_contigs7942.1.1|Name=mRNA_H-canaliculatus_M_contigs7942.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=291bp YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDback to top mRNA from alignment at H-canaliculatus_M_contigs7942:181..4643- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7942.1.1 ID=mRNA_H-canaliculatus_M_contigs7942.1.1|Name=mRNA_H-canaliculatus_M_contigs7942.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4463bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7942:181..4643- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7942:181..4643- >mRNA_H-canaliculatus_M_contigs7942.1.1 ID=mRNA_H-canaliculatus_M_contigs7942.1.1|Name=mRNA_H-canaliculatus_M_contigs7942.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=873bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7942:181..4643- (Hapterophycus canaliculatus Oshoro7m male)back to top |