mRNA_H-canaliculatus_M_contigs7923.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7923.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7923.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: Acid (phosphatase n=1 Tax=Stakelama sediminis TaxID=463200 RepID=A0A840YZJ3_9SPHN)

HSP 1 Score: 104 bits (259), Expect = 1.300e-24
Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = 1
Query:    7 DVAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAY 279
            DVA +M   A+ L PRF++ +GDNFY+ GV ++ DPAW+  FE VY A +L+G PW + LGNHDY G  +AQI+ + H  S RWH+PS  Y
Sbjct:   57 DVAHQMARVADRLNPRFILSVGDNFYENGVTSITDPAWQHSFERVYDAPSLQG-PWRVTLGNHDYHGNVQAQIDYSAH--SKRWHLPSHWY 144          
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: tartrate-resistant (acid phosphatase type 5 family protein n=1 Tax=Sphingomonas echinoides TaxID=59803 RepID=UPI00026CC0DD)

HSP 1 Score: 102 bits (254), Expect = 4.820e-24
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 1
Query:    7 DVAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAY 279
            DVA +MG+TA  L  RFVV +GDNFY+ GV++ +DP W+  FE VY+  AL+ +PW + LGNHDY G P+AQ++      S RW MP R Y
Sbjct:   51 DVAVQMGKTATTLGSRFVVSVGDNFYENGVQSADDPQWQSSFEKVYTDPALQ-VPWYVALGNHDYRGNPQAQVDYAA--TSKRWRMPRRYY 138          
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: Acid (phosphatase n=2 Tax=Arenibacter TaxID=178469 RepID=A0A221UVY3_9FLAO)

HSP 1 Score: 101 bits (251), Expect = 1.770e-23
Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 1
Query:   10 VAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAYSRLFVE 297
            VA RM E A+ L   FV+ LGDNFY  GV +++DP W   FE++Y+   L  IPW + LGNHDY G P+AQI+ T  + S RWHMPSR Y   F++
Sbjct:   69 VADRMEEAAKTLDAEFVIALGDNFYPNGVASIDDPNWGASFENIYTGYHLE-IPWYVVLGNHDYRGNPQAQIDYT--NKSQRWHMPSRYYEYGFID 161          
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: metallophosphoesterase (n=1 Tax=Novosphingobium rosa TaxID=76978 RepID=UPI00082EA6BC)

HSP 1 Score: 100 bits (249), Expect = 3.120e-23
Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1
Query:    7 DVAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAY 279
            DVA +MG  A+    RFVV +GDNFY+ GV +V+DP W   +E VY A +L+  PW   LGNHDY G P+AQI+ T H  S RW MP+R Y
Sbjct:   54 DVAGQMGRIAQSANARFVVAVGDNFYENGVASVQDPQWRSSYEDVYVAPSLQK-PWHALLGNHDYKGTPQAQIDYTAH--SSRWKMPARYY 141          
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: Acid (phosphatase n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A521PDW1_9CAUL)

HSP 1 Score: 100 bits (248), Expect = 4.050e-23
Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 1
Query:    7 DVAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAY 279
            +VA+ M + A E+R RFV+ +GDNFY  GV + +DP W+  FE +Y+A AL+  PW   LGNHDY GRP AQ+     D   RW MP R+Y
Sbjct:   56 EVAQAMAQAAAEVRSRFVISVGDNFYPAGVRSADDPQWKTSFEDIYTAPALQ-TPWYAALGNHDYRGRPGAQLAYARRD--NRWRMPDRSY 143          
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: tartrate-resistant (acid phosphatase type 5 family protein n=2 Tax=Proteobacteria TaxID=1224 RepID=UPI001FA72399)

HSP 1 Score: 100 bits (248), Expect = 4.490e-23
Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 1
Query:    7 DVAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAY 279
            DVA RMGE A  +  RF   +GDNFYD GV +V+DP W+  FE +Y+A +L+  PW + LGNHDY G P+AQ++      S RW MP+R Y
Sbjct:   58 DVAARMGEAAAAVGARFTASVGDNFYDDGVRSVDDPQWKTSFEDIYTAPSLQA-PWFVALGNHDYRGEPQAQLDYAR--VSPRWKMPARYY 145          
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: Acid (phosphatase n=2 Tax=Caulobacteraceae TaxID=76892 RepID=A0A0Q7VTM1_9CAUL)

HSP 1 Score: 99.8 bits (247), Expect = 4.700e-23
Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = 1
Query:   10 VAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAY 279
            VA+ MG+TAEE+  R V+  GDNFY  GV++V DP W   FE VY+A AL+  PW + LGNHDY G P+AQI+ +    S RW MPSR +
Sbjct:   44 VAQAMGKTAEEIASRLVLSAGDNFYPAGVKSVADPHWRRSFEDVYTAPALQ-TPWYVALGNHDYRGAPQAQIDYSA--LSHRWRMPSRYF 130          
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: metallophosphoesterase (n=1 Tax=Sphingomonas sp. Leaf4 TaxID=2876553 RepID=UPI001E49AC6F)

HSP 1 Score: 95.9 bits (237), Expect = 5.630e-23
Identity = 46/90 (51.11%), Postives = 57/90 (63.33%), Query Frame = 1
Query:   10 VAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAY 279
            VA  MG  A   R  FV+ +GDNFY  GVE+V+DP W+  FE VY+  AL+ +PW   LGNHDY G P+AQI+      S RW MP+R Y
Sbjct:   51 VAAAMGRAAAAARSDFVLAIGDNFYSDGVESVDDPLWQSVFEGVYTHPALQ-VPWYALLGNHDYRGNPQAQIDYAA--TSKRWRMPARYY 137          
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: Acid (phosphatase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6P817_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 1.250e-22
Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 1
Query:    1 KLDVAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAYSRLF-VEGVSEVGLLVV 327
            +LDVA++MG  A ++   F+V +GDNFYD GV + +DP ++  FE VY+A++L+ +PW + LGNHDY G  +AQI+      S RW MPSR Y R   V G S+V ++ +
Sbjct:   89 QLDVARQMGLAASQIMAPFIVSVGDNFYDFGVSSADDPQFKASFEDVYTASSLQ-VPWRLILGNHDYRGNCKAQIDYC--QKSPRWSMPSRYYQRTEQVPGGSDVDMIYI 195          
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Match: Acid (phosphatase n=1 Tax=Proteobacteria bacterium ST_bin14 TaxID=1978762 RepID=A0A1W9JXB6_9PROT)

HSP 1 Score: 98.6 bits (244), Expect = 1.550e-22
Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 1
Query:    7 DVAKRMGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIPWLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAY 279
            DVA +MG+ +     RFV+ +GDNFYD GV+++ DP W+  FE VY+  AL  IPW + LGNHDY G P+AQI+      S RW MPSR +
Sbjct:   52 DVAVQMGKASAARSSRFVLAVGDNFYDDGVDSITDPQWKSSFEDVYTDPALN-IPWQVALGNHDYRGNPQAQIDYAA--TSSRWRMPSRYF 139          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7923.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Acid1.300e-2451.65phosphatase n=1 Tax=Stakelama sediminis TaxID=4632... [more]
tartrate-resistant4.820e-2451.65acid phosphatase type 5 family protein n=1 Tax=Sph... [more]
Acid1.770e-2351.04phosphatase n=2 Tax=Arenibacter TaxID=178469 RepID... [more]
metallophosphoesterase3.120e-2352.75n=1 Tax=Novosphingobium rosa TaxID=76978 RepID=UPI... [more]
Acid4.050e-2349.45phosphatase n=1 Tax=Phenylobacterium sp. TaxID=187... [more]
tartrate-resistant4.490e-2350.55acid phosphatase type 5 family protein n=2 Tax=Pro... [more]
Acid4.700e-2353.33phosphatase n=2 Tax=Caulobacteraceae TaxID=76892 R... [more]
metallophosphoesterase5.630e-2351.11n=1 Tax=Sphingomonas sp. Leaf4 TaxID=2876553 RepID... [more]
Acid1.250e-2245.45phosphatase n=1 Tax=Verrucomicrobia bacterium TaxI... [more]
Acid1.550e-2250.55phosphatase n=1 Tax=Proteobacteria bacterium ST_bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7923contigH-canaliculatus_M_contigs7923:3855..5030 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1382303.JPOM01000001_gene1069
PFAMsMetallophos
Model size327
Max annot lvl204458|Caulobacterales
KEGG rclassRC00017
KEGG koko:K14379
KEGG ReactionR00548
KEGG Pathwayko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.76e-23
EggNOG OGsCOG1409@1|root,COG1409@2|Bacteria,1NXRI@1224|Proteobacteria,2U1WZ@28211|Alphaproteobacteria,2KG6H@204458|Caulobacterales
EC3.1.3.2
DescriptionCalcineurin-like phosphoesterase
Cds size306
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854125.645086-CDS-H-canaliculatus_M_contigs7923:3854..40011696854125.645086-CDS-H-canaliculatus_M_contigs7923:3854..4001Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7923 3855..4001 -
1696854125.6590044-CDS-H-canaliculatus_M_contigs7923:4355..44421696854125.6590044-CDS-H-canaliculatus_M_contigs7923:4355..4442Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7923 4356..4442 -
1696854125.6688755-CDS-H-canaliculatus_M_contigs7923:4937..50091696854125.6688755-CDS-H-canaliculatus_M_contigs7923:4937..5009Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7923 4938..5009 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854125.6806147-UTR-H-canaliculatus_M_contigs7923:5009..50301696854125.6806147-UTR-H-canaliculatus_M_contigs7923:5009..5030Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs7923 5010..5030 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7923.1.1prot_H-canaliculatus_M_contigs7923.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7923 3855..5009 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7923.1.1

>prot_H-canaliculatus_M_contigs7923.1.1 ID=prot_H-canaliculatus_M_contigs7923.1.1|Name=mRNA_H-canaliculatus_M_contigs7923.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=102bp
MGETAEELRPRFVVGLGDNFYDVGVETVEDPAWEDQFESVYSAAALRGIP
WLMCLGNHDYMGRPEAQIERTGHDASGRWHMPSRAYSRLFVEGVSEVGLL
VV
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mRNA from alignment at H-canaliculatus_M_contigs7923:3855..5030-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7923.1.1 ID=mRNA_H-canaliculatus_M_contigs7923.1.1|Name=mRNA_H-canaliculatus_M_contigs7923.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1176bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7923:3855..5030- (Hapterophycus canaliculatus Oshoro7m male)
AAGCTAGATGTGGCCAAGCGCATGGGTGAAACAGCCGAGGAGCTGCGGCC AAGGTTCGTTGTTGGTCTTGGTGACAATTTCTACGACGTCGGGGTGAGTC AACTTCATTTGCTGCTTGTTGCGATTGCTGCAGGATTGCGGCCATTTACA TCGAAAGGATAAAAAAGTCCACGAGAGTAATAATCTTCGTTATGTTTAAC GTTCTTCGATGCGTGTAGCTGGAACACTTGAAAAGTTTCGACCTCATCAG CAAGGGAGTTTTAGCATGAGGCTATCTGATTTCCCGCAGTAGCCTAGACG TACCTGTACCTTCGCTTGGACATCCCCGAAGGCGTCCGGCGCACAGATGT CTTGTAAGAAAAAGTCACCAACATGTACATTATCGTTCGCGAATTCCGAT CGATTCATCAGAAGGCGACGGCGCTATTTCAATGTCACCTGCCTGAGACC GACTCGCGTTCGTTTGTTAACATCCTTGAAAAAGAGTCAACAACACCCAG TGCTTGCTCCGTTATTGCTGTATCGTCGACCGACATCGATGCCCCTGAAC GATGCATTCCATCCCACCTCACCCGCTTCGATGTCTAGGTGGAAACGGTC GAGGACCCCGCCTGGGAAGACCAGTTCGAGAGCGTTTATTCCGCAGCGGC CTTGCGAGGTATCCCCTGGCTCATGGTGAGAAACGCCTTGCTGATATGAA CGAAATGTTTTATGCTACTGCACAGCATTCGCCCCTTTCTCTGGTACGCC TTCCGTTGGCGGGATTCGAGCCGCTCGTGTGCGGCATAGACACAGCATCG ACGCGACGTTACCTCCATGTGATGACGATACCTTGTTCTGATCTGCTTGT GTTCAGATCCCAAGGGAAGGTATGTTTGTTTCAAGCGGACCCAAAGTGTG TGGATCGTTCATCCTGCTTTCCTGCGCCAATCACCCAACCTGATGCTTTT TGCAGCAAGACACAGGGGAAGGGTTCCGGGTGTTGCGGAAGCCTTCGCCT CAAGTCAACTCGCCCTGTTCTCGTTGCAGTGTCTGGGCAACCACGACTAC ATGGGCAGGCCTGAAGCGCAGATTGAACGCACCGGCCACGACGCGAGCGG GCGTTGGCACATGCCTTCCAGAGCGTACAGTCGCCTGTTTGTCGAAGGGG TAAGTGAAGTTGGGCTTTTGGTCGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7923:3855..5030-

>mRNA_H-canaliculatus_M_contigs7923.1.1 ID=mRNA_H-canaliculatus_M_contigs7923.1.1|Name=mRNA_H-canaliculatus_M_contigs7923.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=306bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7923:3855..5030- (Hapterophycus canaliculatus Oshoro7m male)
ATGGGTGAAACAGCCGAGGAGCTGCGGCCAAGGTTCGTTGTTGGTCTTGG
TGACAATTTCTACGACGTCGGGGTGGAAACGGTCGAGGACCCCGCCTGGG
AAGACCAGTTCGAGAGCGTTTATTCCGCAGCGGCCTTGCGAGGTATCCCC
TGGCTCATGTGTCTGGGCAACCACGACTACATGGGCAGGCCTGAAGCGCA
GATTGAACGCACCGGCCACGACGCGAGCGGGCGTTGGCACATGCCTTCCA
GAGCGTACAGTCGCCTGTTTGTCGAAGGGGTAAGTGAAGTTGGGCTTTTG
GTCGTG
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