mRNA_H-canaliculatus_M_contigs791.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs791.2.1
Unique NamemRNA_H-canaliculatus_M_contigs791.2.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: N-acetyltransferase (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE20_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.730e-34
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 1
Query:    1 MAWPGPVLPYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVDLTYYPAVRMYETMGYEL 201
            + WPGPVLPYISNVLVH  ARRQGL NRLM RCE+QARDWG+TQVYLHVDLTYYPAVRMYETMGYE+
Sbjct:  141 VGWPGPVLPYISNVLVHRNARRQGLANRLMLRCEKQARDWGFTQVYLHVDLTYYPAVRMYETMGYEV 207          
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: N-acetyltransferase (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGL4_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.530e-30
Identity = 58/73 (79.45%), Postives = 62/73 (84.93%), Query Frame = 1
Query:    1 MAWPGPVLPYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQ------VYLHVDLTYYPAVRMYETMGYEL 201
            + WPGPVLPYISNVLVH  ARRQGL NRLM RCE+QARDWG+TQ      VYLHVDLTYYPAVRMYETMGYE+
Sbjct:  296 VGWPGPVLPYISNVLVHRNARRQGLANRLMLRCEKQARDWGFTQARLHKVVYLHVDLTYYPAVRMYETMGYEV 368          
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: GCN5 (family acetyltransferase n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5YA70_9CYAN)

HSP 1 Score: 67.4 bits (163), Expect = 4.630e-12
Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 1
Query:   25 PYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVDLTYYPAVRMYETMGYEL 201
            PY+SN+ VHPQ RR G+  +L+ RCE  AR WGY+Q+YLHV     PA R+Y   GY L
Sbjct:  132 PYLSNLAVHPQYRRLGVAQQLLSRCEAIARQWGYSQLYLHVLENNSPAKRLYFKAGYRL 190          
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: GNAT (family N-acetyltransferase n=1 Tax=Microcoleus asticus TaxID=2815231 RepID=UPI001FE870C2)

HSP 1 Score: 65.9 bits (159), Expect = 8.150e-12
Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 1
Query:   10 PGPVLPYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVDLTYYPAVRMYETMGYEL 201
            P    PY+SN+ VHP+ RRQG+  +L+  CE+ AR+WG++++YLHV    + A ++Y   GY+L
Sbjct:   78 PSSEYPYLSNLAVHPEYRRQGVAQQLLSNCEETAREWGFSEIYLHVLENNHAARQLYYQAGYQL 141          
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: N-acetyltransferase (n=2 Tax=Tychonema TaxID=54312 RepID=A0A2G4EYA9_9CYAN)

HSP 1 Score: 65.5 bits (158), Expect = 2.070e-11
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 1
Query:    1 MAW--PGPVLPYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVDLTYYPAVRMYETMGYEL 201
            +AW  P    PY+SN+ VHP+ RRQG+  +L+  CEQ  R+WG+++VYLHV    + A ++Y   GY L
Sbjct:  109 LAWQLPSSDYPYLSNLAVHPEYRRQGVAQQLLSSCEQTVREWGFSEVYLHVLENNHGARQLYYQTGYRL 177          
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: GCN5-related (N-acetyltransferase n=5 Tax=Cyanobacteria TaxID=1117 RepID=K9VJY9_9CYAN)

HSP 1 Score: 64.7 bits (156), Expect = 4.310e-11
Identity = 27/59 (45.76%), Postives = 42/59 (71.19%), Query Frame = 1
Query:   25 PYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVDLTYYPAVRMYETMGYEL 201
            PY+SN+ VHP+ RRQG+  +L+  CE+ AR+WG++++YLHV    + A ++Y   GY L
Sbjct:  122 PYLSNLAVHPEYRRQGVAQQLLSNCEETAREWGFSEIYLHVLENNHAARQLYYQAGYRL 180          
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: GNAT (family N-acetyltransferase n=1 Tax=unclassified Tychonema TaxID=2642144 RepID=UPI001D152A26)

HSP 1 Score: 63.2 bits (152), Expect = 7.300e-11
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 1
Query:   25 PYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVDLTYYPAVRMYETMGYEL 201
            PY+SN+ VHP  RRQG+  +L+  CE  AR+WG++++YLHV    + A ++Y   GY L
Sbjct:   65 PYLSNLAVHPDYRRQGVAQQLLSNCEDTAREWGFSEIYLHVLENNHAARQLYYQAGYRL 123          
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: GNAT (family N-acetyltransferase n=7 Tax=Microcoleaceae TaxID=1892252 RepID=UPI001D1597A5)

HSP 1 Score: 63.9 bits (154), Expect = 9.430e-11
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 1
Query:   25 PYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVDLTYYPAVRMYETMGYEL 201
            PY+SN+ VHP+ RRQG+  +L+  CE  AR+WG++++YLHV    + A ++Y   GY L
Sbjct:  123 PYLSNLAVHPEYRRQGVAQQLLSNCEDTAREWGFSEIYLHVLENNHAARQLYYQAGYRL 181          
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: GNAT (family N-acetyltransferase n=1 Tax=Microcoleus sp. SU_5_3 TaxID=2720482 RepID=A0A7X6HM28_9CYAN)

HSP 1 Score: 62.8 bits (151), Expect = 2.260e-10
Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 1
Query:    4 AW--PGPVLPYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVDLTYYPAVRMYETMGYEL 201
            AW  P    PY+SN+ VHP+ RRQG+   L+  CE  AR+WG++++YLHV    + A ++Y   GY L
Sbjct:  113 AWRLPSSDYPYLSNLAVHPEYRRQGVAQDLLSNCEVTAREWGFSEIYLHVLENNHAARQLYYQAGYRL 180          
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Match: N-acetyltransferase (domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F0R9_VITBC)

HSP 1 Score: 63.2 bits (152), Expect = 4.340e-10
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 1
Query:   16 PVLPYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVDLTYYPAVRMYETMGY 195
            P +  IS ++V PQARRQG+G +L + CE+ A  WG T VYL VD    PA+++YE +GY
Sbjct:  213 PNVAVISGLVVAPQARRQGIGQKLCRECEKVAARWGLTSVYLFVDQVNTPAIQLYERLGY 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs791.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
N-acetyltransferase1.730e-3486.57domain-containing protein n=1 Tax=Ectocarpus silic... [more]
N-acetyltransferase1.530e-3079.45domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
GCN54.630e-1254.24family acetyltransferase n=1 Tax=Limnoraphis robus... [more]
GNAT8.150e-1243.75family N-acetyltransferase n=1 Tax=Microcoleus ast... [more]
N-acetyltransferase2.070e-1144.93n=2 Tax=Tychonema TaxID=54312 RepID=A0A2G4EYA9_9CY... [more]
GCN5-related4.310e-1145.76N-acetyltransferase n=5 Tax=Cyanobacteria TaxID=11... [more]
GNAT7.300e-1145.76family N-acetyltransferase n=1 Tax=unclassified Ty... [more]
GNAT9.430e-1145.76family N-acetyltransferase n=7 Tax=Microcoleaceae ... [more]
GNAT2.260e-1044.12family N-acetyltransferase n=1 Tax=Microcoleus sp.... [more]
N-acetyltransferase4.340e-1050.00domain-containing protein n=2 Tax=Vitrella brassic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs791contigH-canaliculatus_M_contigs791:9174..10004 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LE20
PFAMsAcetyltransf_1
Model size201
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.84e-35
EggNOG OGs2E7YR@1|root,2SEGS@2759|Eukaryota
Cds size201
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854125.1476204-CDS-H-canaliculatus_M_contigs791:9173..93051696854125.1476204-CDS-H-canaliculatus_M_contigs791:9173..9305Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs791 9174..9305 +
1696854125.160582-CDS-H-canaliculatus_M_contigs791:9935..100041696854125.160582-CDS-H-canaliculatus_M_contigs791:9935..10004Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs791 9936..10004 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs791.2.1prot_H-canaliculatus_M_contigs791.2.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs791 9174..10004 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs791.2.1

>prot_H-canaliculatus_M_contigs791.2.1 ID=prot_H-canaliculatus_M_contigs791.2.1|Name=mRNA_H-canaliculatus_M_contigs791.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=67bp
MAWPGPVLPYISNVLVHPQARRQGLGNRLMQRCEQQARDWGYTQVYLHVD
LTYYPAVRMYETMGYEL
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mRNA from alignment at H-canaliculatus_M_contigs791:9174..10004+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs791.2.1 ID=mRNA_H-canaliculatus_M_contigs791.2.1|Name=mRNA_H-canaliculatus_M_contigs791.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=831bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs791:9174..10004+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGCGTGGCCTGGTCCAGTTCTTCCCTACATCAGCAACGTTCTGGTCCA CCCCCAAGCACGCCGGCAAGGGTTGGGAAACAGGCTCATGCAGCGATGCG AGCAACAGGCTCGAGATTGGGGGTACACTCAGGTGCGAGGGAGTTCCACG CGTGTACGCTCTTGCCTTGCTCTGCACACGATTGAGAAAAAACCGCGCGC TGCGCAGAGCTGTGCCAGATGCATCTTTTTTCAAGTACACCGAGTGGTGC GACGCATATAACAACGAGGTACGATGCTTGGGGGCTAGCCAAGTGGTGGG AGATATTTTCTCCGCTTGCGCGTTTATGTTTTCCCTTCATGCGTCAGTTC TGTCCTACTGTTGTAGCGAACGCTAACCACGTGAGACTACCGTCCAATCC TTAAAATAAAAGAAACGCGGCACATTCCTCCCGAGAACGTCACTTGAATC GTCTTGGCCATTCGTGGGCTCGGAAAGAAGGAACGAAGGAAGCCGTCGAC CGGTTCCGTTGGACCTATTTGGAGTCTGGAGGGTTAGAGCAGTTGTACAA CCGCGCAAGTCAGGCGCCAATACCAACACCGATGGCGACCAGAGAGCTGA AGCCATTGTAGTCAATCAGCAAACAGAGAGCTCGACAGAAAACATTAATA ACAGCAACAACGATGGCATTACGACCCAACTTGATGCGGCGGCGACCACC AACTAAACACATGCTGCGCGCTTAGTTCTTCCCTCTGCTCGATGCCTTTG TGTTTGTTGCAGGTGTACTTGCACGTGGATCTGACCTACTACCCCGCTGT GCGGATGTACGAGACGATGGGGTACGAGTTG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs791:9174..10004+

>mRNA_H-canaliculatus_M_contigs791.2.1 ID=mRNA_H-canaliculatus_M_contigs791.2.1|Name=mRNA_H-canaliculatus_M_contigs791.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=201bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs791:9174..10004+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGCGTGGCCTGGTCCAGTTCTTCCCTACATCAGCAACGTTCTGGTCCA
CCCCCAAGCACGCCGGCAAGGGTTGGGAAACAGGCTCATGCAGCGATGCG
AGCAACAGGCTCGAGATTGGGGGTACACTCAGGTGTACTTGCACGTGGAT
CTGACCTACTACCCCGCTGTGCGGATGTACGAGACGATGGGGTACGAGTT
G
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