mRNA_H-canaliculatus_M_contigs78277.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs78277.1.1
Unique NamemRNA_H-canaliculatus_M_contigs78277.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: Adenylate (cyclase associated C terminal-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF70_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.340e-18
Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:    4 CFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            C   +V +D+ ISSVE VNCQRI+VQVR +VPSVA+DKTDGF CYL    LETTF TSK
Sbjct:  105 CRKSQVFVDECISSVEAVNCQRIKVQVRVAVPSVAIDKTDGFQCYLSATALETTFTTSK 163
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BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ26_HETAK)

HSP 1 Score: 76.3 bits (186), Expect = 7.900e-16
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 1 
Query:    4 CFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            C   +VLLD  +SS+E VNCQR+Q QVRG+VPSVA+DKTDG L YL  + L  T  TSK
Sbjct:   78 CKKARVLLDTTVSSLEFVNCQRVQAQVRGTVPSVAIDKTDGLLLYLSAESLGATLTTSK 136
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BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: C-CAP/cofactor (C-like domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLI7_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.460e-15
Identity = 35/60 (58.33%), Postives = 46/60 (76.67%), Query Frame = 1 
Query:    1 SCFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            SC   K++ DDA+SS+E+VNC+ +QVQ +G VPSVA+DKTDG L Y+  +G E  FVTSK
Sbjct:  358 SCKKSKLIFDDAVSSIEIVNCKGVQVQCKGRVPSVAIDKTDGCLVYISWEGREVQFVTSK 417
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BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: HVA22 (protein k n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DU57_PHYNI)

HSP 1 Score: 74.7 bits (182), Expect = 1.680e-14
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1 
Query:    1 SCFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            SC   K++ D+A+SS+E+VNC+ +QVQ +G VPSVA+DKTDG L Y+  +G E  FVTSK
Sbjct:  198 SCKKTKLIFDNAVSSIEIVNCKGVQVQCKGVVPSVAIDKTDGCLVYISWEGREVQFVTSK 257
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BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLJ1_PYTOL)

HSP 1 Score: 75.1 bits (183), Expect = 2.280e-14
Identity = 33/55 (60.00%), Postives = 44/55 (80.00%), Query Frame = 1 
Query:   16 KVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            K+L DDA+SS+E+VNC+ +QVQ +G VPSVA+DKTDG L Y+  +G +  FVTSK
Sbjct:  366 KLLFDDAVSSIEIVNCKNVQVQCKGKVPSVAIDKTDGCLVYVSYEGRDVQFVTSK 420
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BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: C-CAP/cofactor (C-like domain-containing protein (Fragment) n=8 Tax=Phytophthora TaxID=4783 RepID=W2LUF6_PHYPR)

HSP 1 Score: 74.7 bits (182), Expect = 3.000e-14
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1 
Query:    1 SCFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            SC   K++ D+A+SS+E+VNC+ +QVQ +G VPSVA+DKTDG L Y+  +G E  FVTSK
Sbjct:  345 SCKKTKLIFDNAVSSIEIVNCKGVQVQCKGVVPSVAIDKTDGCLVYISWEGREVQFVTSK 404
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BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: Adenylyl (cyclase-associated protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VPZ3_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.120e-14
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1 
Query:    1 SCFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            SC   K++ D+A+SS+E+VNC+ +QVQ +G VPSVA+DKTDG L Y+  +G E  FVTSK
Sbjct:  359 SCKKTKLIFDNAVSSIEIVNCKGVQVQCKGVVPSVAIDKTDGCLVYISWEGREVQFVTSK 418
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BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: C-CAP/cofactor (C-like domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2P2Z8_PHYPR)

HSP 1 Score: 74.7 bits (182), Expect = 3.120e-14
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1 
Query:    1 SCFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            SC   K++ D+A+SS+E+VNC+ +QVQ +G VPSVA+DKTDG L Y+  +G E  FVTSK
Sbjct:  117 SCKKTKLIFDNAVSSIEIVNCKGVQVQCKGVVPSVAIDKTDGCLVYISWEGREVQFVTSK 176
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: C-CAP/cofactor (C-like domain-containing protein (Fragment) n=20 Tax=Phytophthora TaxID=4783 RepID=W3A009_PHYPR)

HSP 1 Score: 74.7 bits (182), Expect = 3.150e-14
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1 
Query:    1 SCFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            SC   K++ D+A+SS+E+VNC+ +QVQ +G VPSVA+DKTDG L Y+  +G E  FVTSK
Sbjct:  375 SCKKTKLIFDNAVSSIEIVNCKGVQVQCKGVVPSVAIDKTDGCLVYISWEGREVQFVTSK 434
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Match: C-CAP/cofactor (C-like domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRP6_PHYRM)

HSP 1 Score: 74.7 bits (182), Expect = 3.220e-14
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1 
Query:    1 SCFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKDGLETTFVTSK 180
            SC   K++ D+A+SS+E+VNC+ +QVQ +G VPSVA+DKTDG L Y+  +G E  FVTSK
Sbjct:  359 SCKKTKLIFDNAVSSIEIVNCRGVQVQCKGVVPSVAIDKTDGCLVYISWEGREVQFVTSK 418
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs78277.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Adenylate4.340e-1867.80cyclase associated C terminal-domain-containing pr... [more]
Hypothetical7.900e-1661.02protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
C-CAP/cofactor3.460e-1558.33C-like domain-containing protein n=2 Tax=Nothophyt... [more]
HVA221.680e-1456.67protein k n=1 Tax=Phytophthora nicotianae TaxID=47... [more]
Uncharacterized2.280e-1460.00protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
C-CAP/cofactor3.000e-1456.67C-like domain-containing protein (Fragment) n=8 Ta... [more]
Adenylyl3.120e-1456.67cyclase-associated protein n=1 Tax=Phytophthora me... [more]
C-CAP/cofactor3.120e-1456.67C-like domain-containing protein n=4 Tax=Phytophth... [more]
C-CAP/cofactor3.150e-1456.67C-like domain-containing protein (Fragment) n=20 T... [more]
C-CAP/cofactor3.220e-1456.67C-like domain-containing protein n=1 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs78277contigH-canaliculatus_M_contigs78277:104..283 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog42099.EPrPV00000017650
Preferred nameCAP1
PFAMsCAP_C,CAP_N
Model size180
Max annot lvl2759|Eukaryota
KEGG koko:K11547,ko:K17261
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0000278,GO:0000281,GO:0000323,GO:0000902,GO:0000904,GO:0000910,GO:0000935,GO:0001654,GO:0001667,GO:0001745,GO:0001751,GO:0001754,GO:0001775,GO:0001891,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003002,GO:0003006,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005768,GO:0005773,GO:0005774,GO:0005775,GO:0005829,GO:0005856,GO:0005886,GO:0005937,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006898,GO:0006907,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0006970,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007033,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007190,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007444,GO:0007447,GO:0007450,GO:0008064,GO:0008092,GO:0008103,GO:0008150,GO:0008154,GO:0008179,GO:0008360,GO:0008407,GO:0009267,GO:0009605,GO:0009628,GO:0009653,GO:0009798,GO:0009826,GO:0009887,GO:0009888,GO:0009953,GO:0009987,GO:0009991,GO:0009994,GO:0010468,GO:0010638,GO:0012505,GO:0012506,GO:0014069,GO:0015629,GO:0016020,GO:0016043,GO:0016049,GO:0016050,GO:0016192,GO:0016325,GO:0016477,GO:0019222,GO:0019725,GO:0019899,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022416,GO:0022603,GO:0022604,GO:0022610,GO:0023052,GO:0030029,GO:0030030,GO:0030036,GO:0030042,GO:0030139,GO:0030141,GO:0030154,GO:0030182,GO:0030427,GO:0030428,GO:0030479,GO:0030587,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030834,GO:0030836,GO:0030863,GO:0030864,GO:0030951,GO:0030952,GO:0031090,GO:0031135,GO:0031137,GO:0031138,GO:0031143,GO:0031152,GO:0031175,GO:0031279,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031982,GO:0031983,GO:0032153,GO:0032155,GO:0032279,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032940,GO:0032956,GO:0032970,GO:0032984,GO:0032989,GO:0032990,GO:0033043,GO:0033298,GO:0033554,GO:0034774,GO:0035220,GO:0035222,GO:0035295,GO:0035556,GO:0035578,GO:0035838,GO:0036230,GO:0040007,GO:0040011,GO:0042051,GO:0042052,GO:0042119,GO:0042221,GO:0042330,GO:0042461,GO:0042462,GO:0042582,GO:0042592,GO:0042594,GO:0042802,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043243,GO:0043244,GO:0043299,GO:0043312,GO:0043332,GO:0043624,GO:0043900,GO:0043901,GO:0043933,GO:0044352,GO:0044354,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044764,GO:0045055,GO:0045202,GO:0045321,GO:0045335,GO:0045761,GO:0046530,GO:0046716,GO:0046903,GO:0046999,GO:0048190,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048592,GO:0048599,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051014,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051261,GO:0051286,GO:0051301,GO:0051339,GO:0051493,GO:0051495,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0060205,GO:0060249,GO:0060255,GO:0060429,GO:0060560,GO:0061564,GO:0061640,GO:0061645,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071496,GO:0071840,GO:0071944,GO:0072499,GO:0090066,GO:0090596,GO:0090702,GO:0097435,GO:0097458,GO:0097485,GO:0097708,GO:0098588,GO:0098609,GO:0098630,GO:0098657,GO:0098743,GO:0098794,GO:0098805,GO:0098984,GO:0099120,GO:0099503,GO:0099568,GO:0099572,GO:0110053,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:1901879,GO:1901881,GO:1902903,GO:1902905,GO:1903047,GO:2000241,GO:2000242
Exons1
Evalue2.01e-15
EggNOG OGsKOG2675@1|root,KOG2675@2759|Eukaryota,1MFY2@121069|Pythiales
DescriptionAdenylyl cyclase-associated protein. Source PGD
Cds size180
COG categoryTZ
BRITEko00000,ko03036,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854119.202977-CDS-H-canaliculatus_M_contigs78277:103..2831696854119.202977-CDS-H-canaliculatus_M_contigs78277:103..283Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs78277 104..283 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs78277.1.1prot_H-canaliculatus_M_contigs78277.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs78277 104..283 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs78277.1.1

>prot_H-canaliculatus_M_contigs78277.1.1 ID=prot_H-canaliculatus_M_contigs78277.1.1|Name=mRNA_H-canaliculatus_M_contigs78277.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=60bp
SCFLDKVLLDDAISSVELVNCQRIQVQVRGSVPSVAVDKTDGFLCYLGKD
GLETTFVTSK
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mRNA from alignment at H-canaliculatus_M_contigs78277:104..283+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs78277.1.1 ID=mRNA_H-canaliculatus_M_contigs78277.1.1|Name=mRNA_H-canaliculatus_M_contigs78277.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=180bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78277:104..283+ (Hapterophycus canaliculatus Oshoro7m male)
TCCTGTTTCTTGGACAAGGTTCTTCTGGACGACGCCATCTCCTCCGTCGA
GCTTGTAAACTGCCAGCGCATCCAGGTGCAGGTGCGCGGGTCCGTGCCCT
CGGTGGCCGTGGACAAGACGGATGGCTTCCTGTGCTACCTCGGCAAGGAT
GGTCTGGAGACCACCTTCGTCACGTCCAAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs78277:104..283+

>mRNA_H-canaliculatus_M_contigs78277.1.1 ID=mRNA_H-canaliculatus_M_contigs78277.1.1|Name=mRNA_H-canaliculatus_M_contigs78277.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=180bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78277:104..283+ (Hapterophycus canaliculatus Oshoro7m male)
TCCTGTTTCTTGGACAAGGTTCTTCTGGACGACGCCATCTCCTCCGTCGA
GCTTGTAAACTGCCAGCGCATCCAGGTGCAGGTGCGCGGGTCCGTGCCCT
CGGTGGCCGTGGACAAGACGGATGGCTTCCTGTGCTACCTCGGCAAGGAT
GGTCTGGAGACCACCTTCGTCACGTCCAAG
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