mRNA_H-canaliculatus_M_contigs7820.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX86_ECTSI) HSP 1 Score: 238 bits (608), Expect = 1.470e-77 Identity = 124/175 (70.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query: 1 MRIALAFSSAWFACLWVVSLAQAPARKVA-----QSCPSPPAAEELQPSG-GYTGIPGTATERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLCTNAGDPDLH 507
M ++ FS+A FACL +S AQ+PAR A SCPSP E Q G +TG+PG+ TERSFFAIKPDGL RGLVGEV SRFERKGWKLVGLKM+T GR LVERHYEEH K FFEKLL+YMCSGPVVAMVWEG +VIAGGRK+LGATNPL+A AGTIRGDLCTNAG +H
Sbjct: 1 MGVSFVFSAALFACLSCISFAQSPARTTAPVPLPSSCPSPTTGPEQQQDGDAWTGMPGSITERSFFAIKPDGLQRGLVGEVMSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVH 175
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B5_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.560e-44 Identity = 76/117 (64.96%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 130 SGGYTGIPGTATERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLC 480
SG YTG PGT ERSF AIKP+GL RGLVG+V +RFERKG KLV LK+ V +HY EH GK FF L+ +MCSGP+V MVWEG +VI GGR+MLG T+PL+A GTIRGDLC
Sbjct: 35 SGPYTGSPGTLAERSFVAIKPEGLQRGLVGDVITRFERKGLKLVALKLEQPTPAKVRQHYAEHEGKPFFAGLVRHMCSGPLVLMVWEGPNVIEGGRRMLGKTDPLEAEPGTIRGDLC 151
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=5 Tax=Strongyloididae TaxID=6246 RepID=A0A090L863_STRRB) HSP 1 Score: 152 bits (385), Expect = 2.020e-44 Identity = 70/115 (60.87%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 163 TERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLCTNAGDPDLH 507
TER+F A+KPDG+ RGLVG++ +RFE +G+KLVGLKM+TA RP +E HY++ GK FF L++YM SGP+VA VWEG DV+ GR MLGATNPL +A GTIRGD C G +H
Sbjct: 4 TERTFIAVKPDGVQRGLVGKIIARFEERGYKLVGLKMLTASRPHLETHYQDLKGKPFFPSLIDYMASGPIVATVWEGLDVVKQGRAMLGATNPLASAPGTIRGDYCIQTGRNIIH 118
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYC2_9STRA) HSP 1 Score: 154 bits (389), Expect = 3.950e-44 Identity = 74/136 (54.41%), Postives = 96/136 (70.59%), Query Frame = 1
Query: 100 SPPAAEELQPSGGYTGIPGTATERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLCTNAGDPDLH 507
+P A+ ++ YTGIPGT ER+F AIKPDG+ RGL+ EV +RFE+KG+KL+ LK++T HY + G+ FF L++Y SGP+VAMVWEGTDVI GRK+LGATNP QAA GT+RGD C + G +H
Sbjct: 50 APAEAKAVKKVSPYTGIPGTKNERTFIAIKPDGVERGLISEVIARFEKKGYKLIALKLLTPTEARAREHYADLAGRPFFNGLVKYFSSGPIVAMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVH 185
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8CCH5_9BILA) HSP 1 Score: 150 bits (380), Expect = 1.120e-43 Identity = 71/116 (61.21%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 160 ATERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLCTNAGDPDLH 507
+TER+F A+KPDG+ RGLVG++ SRFE +G+KLVGLKM+TA R +E HY + GK FF L++YM SGPVVA VWEG D + GR MLGATNPLQ+A GTIRGD C G +H
Sbjct: 2 STERTFIAVKPDGVQRGLVGQILSRFEARGFKLVGLKMLTASRAHLEEHYADLKGKPFFPSLIDYMASGPVVATVWEGLDAVKQGRIMLGATNPLQSAPGTIRGDFCIQTGRNIIH 117
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUH1_9STRA) HSP 1 Score: 151 bits (381), Expect = 6.360e-43 Identity = 72/123 (58.54%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 139 YTGIPGTATERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLCTNAGDPDLH 507
YTGIPGT ER+F AIKPDG+ RGL+ EV +RFE+KG+KLV LK++T HY + G+ FF L++Y SGP+VAMVWEGTDVI GRK+LGATNP QA GT+RGD C + G +H
Sbjct: 63 YTGIPGTKNERTFIAIKPDGVERGLISEVIARFEKKGYKLVALKLLTPTEARAREHYADLSGRPFFNGLVKYFSSGPIVAMVWEGTDVILTGRKILGATNPNQAPPGTLRGDNCISTGRNLVH 185
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQA9_SAPPC) HSP 1 Score: 150 bits (380), Expect = 8.750e-43 Identity = 79/155 (50.97%), Postives = 102/155 (65.81%), Query Frame = 1
Query: 46 WVVSLAQAPARKVAQSCPSP-PAAEELQPSGGYTGIPGTATERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLCTNAGDPDLH 507
W+V+ A +A S P+ AA + P YTG+ GT ER+F AIKPDG+ RGL+ EV RFE+KG+KLV +K++TA HY + G+ FF L++Y SGP+V MVWEGTDVI GRK+LGATNP QAA GT+RGD C + G +H
Sbjct: 33 WIVAAGITAATALAFSAPAQNKAAPRVTP---YTGVAGTKHERTFIAIKPDGVERGLISEVIGRFEKKGYKLVAMKLMTATEARASEHYADLAGRPFFGGLVKYFASGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVH 184
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ5_9STRA) HSP 1 Score: 150 bits (380), Expect = 9.530e-43 Identity = 70/123 (56.91%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 139 YTGIPGTATERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLCTNAGDPDLH 507
YTG+ GT ERSF AIKPDG+ RGL+ EV SRFE+KG+KLV +KM+ A + HY++ G+ FF L++Y SGP+VAMVWEG DVI GRK+LGATNP A GT+RGD C G +H
Sbjct: 65 YTGVAGTGNERSFIAIKPDGVQRGLIAEVISRFEKKGYKLVAMKMIWATEEMAANHYDDLKGRPFFPALVKYFASGPIVAMVWEGPDVIKTGRKILGATNPQAADVGTLRGDFCLTTGRNIIH 187
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812N0D1_9DINO) HSP 1 Score: 150 bits (378), Expect = 1.240e-42 Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 139 YTGIPGTATERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLCTNAGDPDLH 507
+TG+PGTA ER+F A KPD + R LVGE+ RFE KGWKLVGLKMV + L HY + K FF+ L+++ SGP+VAMVWEGT+ I GGRK++G TNPL + G+IRGDLC G +H
Sbjct: 50 HTGVPGTAKERTFIACKPDAVQRKLVGEIIRRFEAKGWKLVGLKMVHPTKELASAHYADLSSKPFFDGLVDFFSSGPIVAMVWEGTNCIKGGRKLMGTTNPLDSTPGSIRGDLCVQVGRNIIH 172
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Match: Nucleoside (diphosphate kinase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A424HSN3_9SYNE) HSP 1 Score: 148 bits (373), Expect = 1.330e-42 Identity = 72/116 (62.07%), Postives = 85/116 (73.28%), Query Frame = 1
Query: 160 ATERSFFAIKPDGLHRGLVGEVTSRFERKGWKLVGLKMVTAGRPLVERHYEEHVGKAFFEKLLEYMCSGPVVAMVWEGTDVIAGGRKMLGATNPLQAAAGTIRGDLCTNAGDPDLH 507
A ERSF AIKPDG+ RGLVGE+ RFERKG+KLVGLK +T R L E+HY H + FF L+E++ SGPVVAMVWEG VIA RK++GAT PL+A GTIRGDL N G +H
Sbjct: 2 AVERSFVAIKPDGVQRGLVGEIIGRFERKGFKLVGLKQITPSRELAEQHYGVHKDRPFFAGLVEFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIH 117 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7820.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7820.1.1 >prot_H-canaliculatus_M_contigs7820.1.1 ID=prot_H-canaliculatus_M_contigs7820.1.1|Name=mRNA_H-canaliculatus_M_contigs7820.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=170bp MRIALAFSSAWFACLWVVSLAQAPARKVAQSCPSPPAAEELQPSGGYTGIback to top mRNA from alignment at H-canaliculatus_M_contigs7820:1004..3991+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7820.1.1 ID=mRNA_H-canaliculatus_M_contigs7820.1.1|Name=mRNA_H-canaliculatus_M_contigs7820.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2988bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7820:1004..3991+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7820:1004..3991+ >mRNA_H-canaliculatus_M_contigs7820.1.1 ID=mRNA_H-canaliculatus_M_contigs7820.1.1|Name=mRNA_H-canaliculatus_M_contigs7820.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=510bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7820:1004..3991+ (Hapterophycus canaliculatus Oshoro7m male)back to top |