mRNA_H-canaliculatus_M_contigs7817.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7817.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7817.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4M4_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 6.640e-142
Identity = 223/291 (76.63%), Postives = 252/291 (86.60%), Query Frame = 1
Query:    1 TCLRRRALIRTVGGALASIA----VLGRPPEASAAGMAVASRPAKKRSPAFLCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMETGMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDKV 861
            T L RRAL+RT+GGALAS+A    +   P +A+AAG AV  RP  KRSP FLCD AVSYLYNPT +SE+WLVGTAHISNSSATLVENVIR IKPQVVMVELDA+RVGSF++ SK+G++++      G++ APP  R   PFFGAFFKQLLDP V VNDRIT+FFA ALGKAISKMYESMDQKGLSSGQEFTIAI+EARACGAK+LLGDRDV++TLRRLSEALR IDLQ+++QS QMETG+GLEALDGSS ESINSSL+ILKNRETMRKVI FYK+EAPELYNAMIGERDKV
Sbjct:   69 TQLDRRALLRTIGGALASLASASALTASPQQAAAAGTAVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMKPSKQGEKTLADGT--GKEIAPPAERTRNPFFGAFFKQLLDPKVPVNDRITDFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRKIDLQKISQSGQMETGLGLEALDGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKV 357          
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EEF9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 8.450e-40
Identity = 109/271 (40.22%), Postives = 149/271 (54.98%), Query Frame = 1
Query:  130 SPAFLCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIE---ASKKGDESVTVDY-------------------EGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELA----QSSQMETGMGLE-ALDGS-SKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
            +P  LCD A+S L    +   I LVGTAHIS+ SA LV ++IR ++P+ V VELDAKRVG F+E   + K+GD ++                       + G   AP P  +    F A  +  L   ++   R  E  A A+G A+  MY  +D+ G SSG+EF +AI      G+KI+LGDRDVQVTL RLSEAL  +D  +L       S M  GMG   A  G  SKE ++  +E LK RE +R +++  K+E PELY A++ ERD+
Sbjct:   86 APPRLCDQAISELTLDGVT--IRLVGTAHISDESALLVGDIIRTVRPETVFVELDAKRVGRFLEKDGSGKQGDRTLAPTPVEPTSSRGWGVVRDPVSAPQAGTSVAPAPSTEKLGIFSAI-RTGLGKKIASLYRAAE--AAAVGSALQSMYSQLDKIGFSSGEEFKMAIETGSEIGSKIVLGDRDVQVTLNRLSEALEIVDWNKLTTMTIDDSIMPKGMGQNSAASGDISKEDLSQVVEALKTRENVRSIMNSLKKELPELYTALVAERDE 351          
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Pheromone (shutdown, TraB n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUP6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.580e-37
Identity = 102/286 (35.66%), Postives = 148/286 (51.75%), Query Frame = 1
Query:  133 PAFLCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVG-------------SFIEASKKGDESVTVDYEGGEKSAPPPGR-----------KPTP---------------FFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDL---QELAQSSQMETGMGLEALD---GSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERD 855
            P+ LCD A+S+L NP    +I+++GTAHISN+SA LV + IR+++PQ VM+ELDA R+G             S +  S+     V V     +    PP             +P P               F  A   +L        +R+    A  +G+ IS +Y  +D+ G  SGQEF +AI E R  GA +LLGD+DVQVTLRRLS+AL   +L   +E+   ++      LEA     G +   I+ ++E LK R ++R +++  +QE PE+Y AMI ERD
Sbjct:  118 PSGLCDDAISHLRNPKTGQDIYMIGTAHISNASALLVRSTIRELRPQTVMLELDASRIGRLAKNTSNSIPKPSSMGRSEPSRRVVIVASSSSDSPDVPPATFVIPGPASTALQPPPSDPGFLSKQEEGKAGFLRAALGELTRVGSGFRERLVGLGAMVVGQVISGLYRGLDKMGFVSGQEFIVAIDEGRKVGADLLLGDQDVQVTLRRLSDALSRSELGKVREMESPTRSPAARELEARGIRMGDNAADISVAMEALKERSSVRTLMASLQQELPEVYKAMIEERD 403          
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1T6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.050e-35
Identity = 106/308 (34.42%), Postives = 161/308 (52.27%), Query Frame = 1
Query:   52 SIAVLGRPPEASAAGM-AVASRPAKKRSPAF--LCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFI---EASKKGDESVTVDYEGGEK----------SAP-------------PPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQEL-AQSSQME---------TGMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
            SIAV    P AS A    + + P+K  SP    LCD +VS   NP+    ++++GTAHIS++SA +   ++RD KP  V VELDAKRVG  I     S K    +++    GE           SAP             PP  +P P     F        ++ +++    +  +G +I  +Y  ++ +G S+G+EF +A+ E    G+ I+LGD+DV+VTLRRL+EAL   DL++L A  S+ME         +G  +E     S E +   +E +K RE ++ ++S  +  APE+YNAM+ ERD+
Sbjct:   86 SIAVASANPFASFAETETLVTTPSKSSSPVSSPLCDPSVSTFRNPSNNRVVYILGTAHISSASADVAGQLVRDTKPSAVFVELDAKRVGRAIPKPSVSGKTSGDISISDTAGEAAPETATPVLVSAPISSPVVNVVEVEVPPSSRPPPTKSNPF--------NLKEKLLNNASKLVGNSIKGLYSKLESEGFSAGEEFVVAVREGLKIGSTIVLGDQDVEVTLRRLTEALSKTDLKKLLAADSEMEQNMKQLMPDSGKAIETTGEMSSEQLTYFVETIKARENVKLLMSNLQSVAPEIYNAMVKERDE 385          
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0R5_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.490e-34
Identity = 80/239 (33.47%), Postives = 138/239 (57.74%), Query Frame = 1
Query:  145 CDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQL-LDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMETGMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
            C+ AV++L      ++++++GTAHIS++SA LV+ VI+ +KP  VM+ELD  RV        K ++     +E  +      G K     G F +   +  S  +++R+  F AG +G  IS +Y+S+D++G SSG+EF +AI EA    A ++LGDR  + TL+RL++A+   DL + +          L +L+ +  +++  ++EILK RE ++ ++     + PELY A++ ERD+
Sbjct:   65 CEQAVTHLKKSG--TDMYIIGTAHISSASALLVKEVIQQVKPGYVMLELDPSRV-----KLAKRNQDANTQFESADA-----GSKKGMNTGLFSEAFSVTQSTPISERLVSFTAGLVGTVISTLYKSLDKRGFSSGEEFKVAIEEAGKINASVILGDRPAKETLKRLAQAISVSDLSQKSSGDMSSIEAALASLNYADNQALAETVEILKERENVKTMMKLLSDQVPELYKALVTERDE 291          
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ECZ5_TRICV)

HSP 1 Score: 137 bits (344), Expect = 8.370e-34
Identity = 101/261 (38.70%), Postives = 139/261 (53.26%), Query Frame = 1
Query:  142 LCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFI--EASKKGDESVTVDYEGGEKSAPPPGRKPTP---FFGAFFKQLLDPSVSVN-----DRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMETGMGLEAL---DGSSKESINSSL---------EILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
            LCD +V+   N      + LVGTAHIS  SA L   V+R++KP  V VELD KR+   +  ++ ++G        EGG  ++   G    P      A  +Q   P   VN     +R+ E    A+G AI  +Y  +  +G + G+EF +AISEA    AK++LGDRDV VTLRRL+EAL   DL++L  +S  E    L+A    D  S  S++ SL         E +K RE +R V+S  K  APELY AM+ ERD+
Sbjct:  122 LCDPSVTTWRNAADGRVVHLVGTAHISEDSAALASRVVREVKPDAVFVELDRKRIARALPPQSVREGGGGEGASSEGGSPTSGGEGFADGPGASSAAAQMEQQQAPPKRVNPFAVRERLMEAGTRAVGDAIKGVYAKLGSEGFNPGEEFVLAISEAMKINAKVVLGDRDVDVTLRRLTEALARTDLKKLT-ASDSELERSLKAFVPDDMKSDVSMDRSLTRDQLSRYVETVKARENVRAVMSQLKAAAPELYGAMVAERDE 381          
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LCG8_9EUGL)

HSP 1 Score: 133 bits (335), Expect = 1.230e-32
Identity = 91/263 (34.60%), Postives = 147/263 (55.89%), Query Frame = 1
Query:   82 ASAAGMAVASRPAKKRSPA-FLC-DGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMETGMGLE---ALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERD 855
            A+A G  + ++P+   S A  +C D AVS+L  P  + E++L+GTAHISN SA LV+NV+R+++P+ VM+ELDA R+    + S  G +   V        A    R            L   S     R+ +  A  +G  ++  Y +++Q G  SGQEF +A+ EA+A  A I+LGD+ + +TL+RL +AL   DL ++         + +E   AL+  SK  +  ++E+LK R  +R++++  KQ+ PE+Y A++ ERD
Sbjct:  124 AAAIGWTLFTQPSTAASAASVVCTDQAVSHLVGPNGR-EVFLIGTAHISNISAELVKNVVREVRPETVMLELDAGRIKMAPDGS--GPQEGVVGSRASLSLAERARR-----------DLFTGSKPFGVRLQKLQADLIGGLLAAFYSALNQMGFDSGQEFIVALQEAKALNANIVLGDQPIDITLQRLQQALAVSDLSKMFSPPDSMNEVEIEVAQALNSGSKAELAGAVELLKQRSQVRELVAVMKQQLPEVYQALLAERD 372          
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC05_AURAN)

HSP 1 Score: 130 bits (326), Expect = 3.800e-32
Identity = 88/242 (36.36%), Postives = 132/242 (54.55%), Query Frame = 1
Query:  142 LCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQEL----AQSSQMETGMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERD 855
            LCD AVS L N   KS ++LVGTAH+S+ SA LV   I  ++P +VMVELD KRV  F                GGE   P     P P               V  R+  F  GA+   +  +Y+S+++ GL +G+EF +A+ +AR+ G  +LL DRDV  TLR + +A+R    ++L    A  S    G    A+D +S++S+ S++E++K RET+R +++  +  AP LY+A++  RD
Sbjct:   52 LCDEAVSALANG--KSTVYLVGTAHVSDVSARLVAETIDAVRPTLVMVELDGKRVQGF----------------GGEAPGPATPLAPAP---------------VGQRLGAFVVGAV---LRSLYKSLERLGLDTGEEFAVALRKARSAGVPVLLADRDVDETLRLVGDAVRKTTSKDLENFEAALSPALAGDLTRAVDVASRDSVASTVELVKKRETVRTIVAALEANAPALYDALVDSRD 257          
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QFI7_9CRYP)

HSP 1 Score: 123 bits (309), Expect = 1.030e-30
Identity = 79/230 (34.35%), Postives = 122/230 (53.04%), Query Frame = 1
Query:  160 SYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPP--PGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMET-GMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAM 840
            ++L+N     +I+L+GTAHIS +SA  V ++IR ++P  +MVELD  RV                       SA P    ++PT  +    ++ L     + DRI    A  +G AI+ +Y  +++ G SSGQEF  AI EARA  A ++LGDR V+ TL RL +A+ ++ L  L    +    G     +D   K +I S++E+LK R  +R V++  K + PE+Y A+
Sbjct:    1 TFLFNKATGQQIYLIGTAHISEASANQVRDIIRAVRPDAIMVELDESRVSP---------------------SAAPGVASQEPTSLWEILRREALRTDAPILDRIRSAEADIIGLAIASLYRKLNRMGFSSGQEFATAIREARASNATLILGDRGVRQTLNRLQQAIETVGLPRLTAFVRARADGPESARIDMEDKSAIESTVEVLKERGNVRAVMAALKADLPEIYEAV 209          
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SC86_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.050e-29
Identity = 87/262 (33.21%), Postives = 142/262 (54.20%), Query Frame = 1
Query:   82 ASAAGMAVASRPAKKRSPAFLCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMET---GMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
            A+AA +   +RPA    PA  CD AV+   N     ++++VGTAH+S  SA LV   I  ++P +VM+ELD KR+     A+                S P P R+P                S+ +R   +  G+L   +S +Y+S+D  GL+SG+EF++A+++AR    +ILL DRDV  TLRRLS A++    Q+  +   + T   GM  E +D   K S+  ++E +K R T++++++  ++  P +Y+A++ ERD+
Sbjct:   30 ATAAALGTRARPAVAVPPA--CDDAVAVWSNGN--RQVYIVGTAHVSEKSAELVAQTIDAVQPTLVMLELDRKRLKGAPAAASSA-------------STPQPPRRP----------------SLLERTGAWVVGSL---LSSLYKSLDDLGLNSGREFSVALTKARENNIQILLADRDVDETLRRLSAAIQQTSSQDFERFEALATTISGMA-EPVDLGDKNSVTGAIETIKTRSTVKELVNDLRESLPNIYSALVDERDE 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.640e-14276.63protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Hypothetical8.450e-4040.22protein n=2 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Pheromone1.580e-3735.66shutdown, TraB n=2 Tax=Monodopsidaceae TaxID=42507... [more]
Hypothetical3.050e-3534.42protein n=1 Tax=Chaetoceros debilis TaxID=122233 R... [more]
Hypothetical1.490e-3433.47protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical8.370e-3438.70protein n=2 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical1.230e-3234.60protein n=1 Tax=Eutreptiella gymnastica TaxID=7302... [more]
Uncharacterized3.800e-3236.36protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Hypothetical1.030e-3034.35protein (Fragment) n=1 Tax=Cryptomonas curvata Tax... [more]
Hypothetical3.050e-2933.21protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7817contigH-canaliculatus_M_contigs7817:1761..5056 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FHB1
PFAMsTraB
Model size861
Max annot lvl2759|Eukaryota
KEGG rclassRC00034,RC00767,RC02141,RC02755
KEGG koko:K03781
KEGG ReactionR00009,R00602,R02670
KEGG Pathwayko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014
KEGG ModuleM00532
Hectar predicted targeting categorychloroplast
Exons6
Evalue1.14e-140
EggNOG OGsCOG1916@1|root,KOG2860@2759|Eukaryota
Ec32 ortholog descriptionPheromone shutdown, TraB
Ec32 orthologEc-03_004110.1
EC1.11.1.6
DescriptionTraB family
Cds size861
COG categoryKLT
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7817.1.1prot_H-canaliculatus_M_contigs7817.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7817 1761..5056 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854118.0696912-CDS-H-canaliculatus_M_contigs7817:1760..19971696854118.0696912-CDS-H-canaliculatus_M_contigs7817:1760..1997Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7817 1761..1997 +
1696854118.082326-CDS-H-canaliculatus_M_contigs7817:2514..26101696854118.082326-CDS-H-canaliculatus_M_contigs7817:2514..2610Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7817 2515..2610 +
1696854118.1014855-CDS-H-canaliculatus_M_contigs7817:2987..31801696854118.1014855-CDS-H-canaliculatus_M_contigs7817:2987..3180Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7817 2988..3180 +
1696854118.1149945-CDS-H-canaliculatus_M_contigs7817:3821..39191696854118.1149945-CDS-H-canaliculatus_M_contigs7817:3821..3919Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7817 3822..3919 +
1696854118.1254046-CDS-H-canaliculatus_M_contigs7817:4287..44251696854118.1254046-CDS-H-canaliculatus_M_contigs7817:4287..4425Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7817 4288..4425 +
1696854118.136503-CDS-H-canaliculatus_M_contigs7817:4957..50561696854118.136503-CDS-H-canaliculatus_M_contigs7817:4957..5056Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7817 4958..5056 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7817.1.1

>prot_H-canaliculatus_M_contigs7817.1.1 ID=prot_H-canaliculatus_M_contigs7817.1.1|Name=mRNA_H-canaliculatus_M_contigs7817.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=287bp
TCLRRRALIRTVGGALASIAVLGRPPEASAAGMAVASRPAKKRSPAFLCD
GAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAK
RVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQLLDPSV
SVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKI
LLGDRDVQVTLRRLSEALRSIDLQELAQSSQMETGMGLEALDGSSKESIN
SSLEILKNRETMRKVISFYKQEAPELYNAMIGERDKV
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mRNA from alignment at H-canaliculatus_M_contigs7817:1761..5056+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7817.1.1 ID=mRNA_H-canaliculatus_M_contigs7817.1.1|Name=mRNA_H-canaliculatus_M_contigs7817.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3296bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7817:1761..5056+ (Hapterophycus canaliculatus Oshoro7m male)
ACGTGCCTTCGACGCAGAGCACTCATTCGAACGGTGGGCGGAGCGCTCGC GTCGATAGCCGTGCTAGGGAGGCCGCCTGAGGCATCGGCAGCAGGAATGG CCGTGGCGAGTCGGCCGGCCAAGAAACGTTCGCCCGCGTTTTTGTGCGAC GGTGCCGTGTCGTACCTGTACAACCCAACAATAAAGTCGGAGATCTGGCT CGTGGGCACGGCTCACATTTCGAACTCCAGCGCAACGGTGAGCTCTTGGT GGTTAGCAATCACGATGTCGTGGGAAATCTTCGTTTCGAGGTTCGTTTTC TCTGCGTTGGTTTCCCGGGTGACCTGCTGTATCCCCACCAACTCACGTGC GCACACACACCCTCTTTGTATCTGTTGTGCGAGTCTATCCCGCGAGGATA CAAACGGGAATGCCCCGCCACCATGTGGGCAGCACGATGGAAACCCAAGC TGCTAGTATACGCGCACTTTGAACGTGCTGCGTACTCGCAGCACGTGTAG GGTATACACGACCGAGCGTGAACAAAAGTTTGAGACTAGGCTCGGGTAGA CAGACCCTGGCACGGTCCGTTTCACGAGTTTACCTTCCCCATTCCCTCTC GGGGCGAGCCATTGTTCCACGTTTATCACGACGAAGTTGCTCCTGAAATC TCTTAATTTTGAAAGCGCGGCGCAGCTATGACTCGTAACGCTCGATGCGA CAATCCAAGCGTGGCTTCTCCCTCTCGTGCACCGCTGTTACTCTTTTCTA CCAGTTGGTAGAGAACGTGATTCGCGATATCAAGCCCCAAGTTGTCATGG TGGAGCTCGACGCGAAGAGAGTCGGCAGCTTCATAGAGGCGTCAAAGAAG GTGAGACCCCACTACCTGGAGAGTGTGTCCCGAAAGCTTTTGTCTCCACC ATCAAAGCGGTCTCCTTTGCATCAGAAGCCGCTTCCCCTGCTCGGGTTTG GAATGACAGAGGCCGTTCGAACATGGGACGTTGTGGGTGTGCCACAAGCT CGCCTCTGAAAGGGAGAAGTCCCAGGTATTTGGCACCCGCTCACGGTCAT CTGTGGGGCATCCGTGTCGCATTGGATGAGCTACACGGCGCTGCTTTTGT CTTCTATCTCATAGTCATGGCGCAGCCCGAACCGCGTTAAGGCGACGATC CAGAAGACATCGCATATTTACACCACATTATCGTGAGAACTGCTTGATCG TTGATTCACGTACGTGTTGTTCTACAGGGGGATGAGAGCGTTACCGTTGA TTATGAAGGCGGGGAGAAGTCGGCGCCTCCTCCAGGAAGAAAACCGACGC CGTTCTTCGGCGCGTTCTTCAAGCAACTGCTCGACCCTAGCGTGTCGGTG AACGACAGAATAACAGAATTTTTTGCGGGGGCCCTGGGAAAGGCCATCTC CAAGATGTACGAGTCTATGGGTAAGTAATCTCGCCATGTACCAGCCCTTC AAGTGCCGCATGTTTCGCCGTCTGATCGAGCCGATTTGGTCATCGTGCCG CGAAGGATAGGTCAAGGTGTTCATGAATCAAATCCACTTTAATTACGTGA GTGTCATGAAAAGAAGTGCATATTGCATGCGGTACTCAGCCGTGCGACGT GCATTGCGGCTTTTGGAGACGCTCTCGGTGCGATCGCTAACGAGATGTGC GTCCTCAGGACTGTACGCAGCAGACTATGCGCAAGAATTTGGTTTTGATT AGTTATTTTGGGGGCTGGGAGTTCGATAGCACTTCCTCATGATTTCGCAC GCTTGATGGAGTCTTTCACTCTTTATTGTACGCTAGAACTTACGACGACG CAAGAGTTAGCGCTGGTGTAATCGATTTCCAGAAGGCTGCCTCCAGCGTT CACAGATAGGAAAACGGTGACAGACCAAATGCGCCTGGCGGTCAAACCGA TAATAGCCGGCACCTAAACTGCCCTTTTTTCACGCAAAGGTGCTGGCACA ATCTTCTCTCTACAACTGGACATTTCCTACTGCTGCATTACACTTGTACG CAAATTTGGTGCCGCAACTGTTCTGCTGCTCTCATGCGCGGGGTCTGTCT TCACGTGACAGACCAAAAGGGGCTGTCTTCTGGGCAGGAGTTCACCATCG CCATCAGCGAGGCTCGGGCTTGCGGAGCGAAGATTCTTCTAGGGGATCGA GATGTCCAGGTACGTGTGCGCGGTATCCCGTGAAAAGATCGTGCGCATGA CAGCAGTTGCGTGTGCGTCCGATGCACCCCGAGGAAGGATTTTTGTTGGA AGACCAACGCGAAATGTGTCAGCGTGACAGATTAGATGGTATGTCCGCGG CAGATGTGAGAATCGCTGGGAGCGACCGCCAAGATATATGTCTAACTGCT CTGCCTTTCGCACACAATCACGAACCTGGAGCTTGGCATATGACACCTCG CGTTGCACTACCTTGATGCCCACTTGACGAGATATGTTTCTCCAGCTTTG CGGTCGCCCGTCACCGGGTCTCATACCCAACCTTCAGACGCGGATCGGTG GGCCTGCCTCGATATCCGACTTTGCAGGTAACCTTGCGCCGACTTTCTGA GGCTTTGAGAAGCATAGACCTTCAAGAGTTGGCACAAAGCAGTCAGATGG AGACCGGGATGGGCCTAGAGGCGCTGGACGGCAGCAGCAAAGAGTCGATT AACTCAAGTCTGGAGGTGAGGTTGTTGTTTCAGGGAGAAATCGCGTGTAT TTCAACGCCGACAGGGCTGACGTACCCTTTCCTCTGTTCAGGAATAACGT TGGTCGGGTGGCTCTTATCCGCCTGTATTTGCTGTGAGGTGCTCTCAACC AACGCCTGAAGCGAGTGTCAGCACGCGACAGCAGTGCTATGCCGGCATCA CAAGCACTGAGCCTTTGGTCGCCATCTTGGAAGGGCGAGTGGCTCTCATG AGGAGGGTGCTTTTCTGCCAGTGAAGATGGTGTATCTGTGCGTGCTTTCA TAGTATAAAAGGCTTGTTCTTGTGAGACACATGTGCCGCCTTTTGCGGCT CCTGCTTTCTGTCATAGGGCAGCCTGGTTTGCCCTACTGCTTTTTGAGGT CCATTGGTCGGTAACGGTTGGCATCTGAAGCGTATACCACAAATACAAGA TGATCAATAATTTCCTTCAGGCTTGCAAGCTTGAGGTATGTCCATGCGGT CTTGAGCCTGTCGTAAGTGTGTTTGTTCTCCCTGCATCATCTGGCAGATT TTGAAGAACCGCGAAACGATGCGCAAGGTCATCAGTTTCTACAAGCAAGA GGCTCCCGAGCTGTACAACGCCATGATCGGCGAGAGAGATAAGGTA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7817:1761..5056+

>mRNA_H-canaliculatus_M_contigs7817.1.1 ID=mRNA_H-canaliculatus_M_contigs7817.1.1|Name=mRNA_H-canaliculatus_M_contigs7817.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=861bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7817:1761..5056+ (Hapterophycus canaliculatus Oshoro7m male)
ACGTGCCTTCGACGCAGAGCACTCATTCGAACGGTGGGCGGAGCGCTCGC
GTCGATAGCCGTGCTAGGGAGGCCGCCTGAGGCATCGGCAGCAGGAATGG
CCGTGGCGAGTCGGCCGGCCAAGAAACGTTCGCCCGCGTTTTTGTGCGAC
GGTGCCGTGTCGTACCTGTACAACCCAACAATAAAGTCGGAGATCTGGCT
CGTGGGCACGGCTCACATTTCGAACTCCAGCGCAACGTTGGTAGAGAACG
TGATTCGCGATATCAAGCCCCAAGTTGTCATGGTGGAGCTCGACGCGAAG
AGAGTCGGCAGCTTCATAGAGGCGTCAAAGAAGGGGGATGAGAGCGTTAC
CGTTGATTATGAAGGCGGGGAGAAGTCGGCGCCTCCTCCAGGAAGAAAAC
CGACGCCGTTCTTCGGCGCGTTCTTCAAGCAACTGCTCGACCCTAGCGTG
TCGGTGAACGACAGAATAACAGAATTTTTTGCGGGGGCCCTGGGAAAGGC
CATCTCCAAGATGTACGAGTCTATGGACCAAAAGGGGCTGTCTTCTGGGC
AGGAGTTCACCATCGCCATCAGCGAGGCTCGGGCTTGCGGAGCGAAGATT
CTTCTAGGGGATCGAGATGTCCAGGTAACCTTGCGCCGACTTTCTGAGGC
TTTGAGAAGCATAGACCTTCAAGAGTTGGCACAAAGCAGTCAGATGGAGA
CCGGGATGGGCCTAGAGGCGCTGGACGGCAGCAGCAAAGAGTCGATTAAC
TCAAGTCTGGAGATTTTGAAGAACCGCGAAACGATGCGCAAGGTCATCAG
TTTCTACAAGCAAGAGGCTCCCGAGCTGTACAACGCCATGATCGGCGAGA
GAGATAAGGTA
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