mRNA_H-canaliculatus_M_contigs7806.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMC0_ECTSI) HSP 1 Score: 187 bits (474), Expect = 6.060e-56 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 1
Query: 109 MATDFKRGDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKARVLAETGVGDK 405
MATDFKRGDTGINTAEGQISGPRAARLAKQR EDQKDYESK+QKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKARVLAETGVGDK
Sbjct: 1 MATDFKRGDTGINTAEGQISGPRAARLAKQRLEDQKDYESKRQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKARVLAETGVGDK 99
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: XAP5, (circadian clock regulator-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T7_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.120e-28 Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 1
Query: 121 FKRGDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKARVLAE 387
FKR TGI+T EG ++G RAA+L K+R+ Q +YE+KK+KIQDEY RG L+I+ KFGGSATDQ+EAMFK+ TVGLVTADEF+KAR AE
Sbjct: 9 FKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAMFKSKTVGLVTADEFRKAREEAE 97
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M861_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.780e-15 Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 118 DFKRGDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFGGSAT-DQYEAMFKATTVGLVTADEFKKARVLAETGVGDK 405
+F R DTGINT EG ++G RAA L+K+R +Q D+E++KQKI+ + RG L ID KF + E F+A TVGLVTA+EF+KA AE G +
Sbjct: 7 NFIRPDTGINTVEGNVAGSRAATLSKKRAAEQADFEARKQKIKADSERGKLGIDSKFDTNTNVSAEEQRFRAKTVGLVTAEEFRKASAEAEKARGKR 103
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUW8_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 4.270e-15 Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 121 FKRGDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKARVLAETG 393
FKR G++T EG ++G RAA+L KQR++ Q +E+K+ I + R ID KF S+ ++ EA F+A T GLVTA+EF++ R LAE G
Sbjct: 6 FKRNAAGVHTVEGNVAGARAAKLTKQREKAQAAFEAKRAVIAKDAERRTQGIDSKFSQSSANKTEASFRAKTYGLVTAEEFRRQRELAENG 96
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBR5_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.200e-15 Identity = 43/89 (48.31%), Postives = 62/89 (69.66%), Query Frame = 1
Query: 109 MATDFKRGDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFGG-SATDQYEAMFKATTVGLVTADEFKKA 372
+ +FKR D+GI+T EG ++G RAA L KQR+ Q ++E +K+K+ + RG+ I DKF G S+ + E F++ TVGLVTADEF+KA
Sbjct: 4 FSANFKRPDSGIHTVEGNVAGARAATLTKQREAQQLEFEERKRKLAQDAERGSKTIQDKFSGDSSLTKAEQSFRSRTVGLVTADEFRKA 92
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: Uncharacterized (protein AlNc14C7G946 n=2 Tax=Albugo TaxID=65356 RepID=F0W1H8_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 9.360e-14 Identity = 48/99 (48.48%), Postives = 67/99 (67.68%), Query Frame = 1
Query: 109 MATDFKR-GDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKARVLAETGVGD 402
M +D +R GD G++T EG ++G RAARL KQR+E +KDYESKKQ+I D R A +I+ F + D +A FK TVGLVTA+EF++ R + ++ D
Sbjct: 1 MPSDIQRYGDAGVHTVEGNLAGSRAARLTKQREEQRKDYESKKQEITDTNFR-ASRIEKSFE-THHDLEDAEFKRQTVGLVTAEEFRRKREILQSRRSD 97
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VLY5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 4.040e-12 Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 109 MATDFKRGDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFG-GSATDQYEAMFKATTVGLVTADEFKKARVLAE-------TGVGD 402
+F R ++GI+T EG ++G RAA L K+R++D + +E KKQ+I+ E RG ++DDKF + E F+ TVGLV+A+EF+KA AE G+GD
Sbjct: 4 FVANFHRPESGIHTIEGNVAGSRAAALTKKREKDARAFEEKKQQIKHESERGRKRMDDKFNVDKSLSAAEQKFRRDTVGLVSAEEFRKATREAERLRRRERVGLGD 109
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNZ0_HYAAE) HSP 1 Score: 71.2 bits (173), Expect = 6.420e-12 Identity = 40/82 (48.78%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 130 GDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKAR 375
G +G +T EG ++G +AA+L +QR++ Q++YE+K+Q+I+ RG ++IDD F S TD E+ FK TVGLVTA+EF+K R
Sbjct: 25 GSSGAHTVEGNVAGSKAAKLTRQREKQQQEYEAKRQEIEKTNRRG-MRIDDNFQ-SHTDNDESEFKRQTVGLVTAEEFRKKR 104
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHX8_PYTOL) HSP 1 Score: 70.9 bits (172), Expect = 8.870e-12 Identity = 44/90 (48.89%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 109 MATDFKR-GDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKAR 375
MA++ +R G +G++T EG ++G RAARL KQR+++Q ++ KKQ IQ RG +ID F S D+ EA FK TVGLVTA+EF++ R
Sbjct: 1 MASNIERYGSSGVHTVEGNLAGGRAARLTKQREKEQHEFARKKQDIQHNLQRGT-RIDQNFE-SHRDEDEAEFKRQTVGLVTAEEFRRKR 88
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKT1_GLOUD) HSP 1 Score: 70.5 bits (171), Expect = 1.060e-11 Identity = 43/90 (47.78%), Postives = 63/90 (70.00%), Query Frame = 1
Query: 109 MATDFKR-GDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKAR 375
MA++ +R +G++T EG ++G RAA+L+KQR++ Q++YE KK +IQ + RGA +ID F S D E FK TVGLVTA+EF++ R
Sbjct: 1 MASNIERYKSSGVHTVEGNLAGSRAAKLSKQREQQQQEYEQKKHEIQQTHQRGA-RIDANFE-SHRDDDETEFKRQTVGLVTAEEFRRKR 88 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7806.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7806.1.1 >prot_H-canaliculatus_M_contigs7806.1.1 ID=prot_H-canaliculatus_M_contigs7806.1.1|Name=mRNA_H-canaliculatus_M_contigs7806.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=99bp MATDFKRGDTGINTAEGQISGPRAARLAKQRQEDQKDYESKKQKIQDEYHback to top mRNA from alignment at H-canaliculatus_M_contigs7806:17..2280- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7806.1.1 ID=mRNA_H-canaliculatus_M_contigs7806.1.1|Name=mRNA_H-canaliculatus_M_contigs7806.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2264bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7806:17..2280- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7806:17..2280- >mRNA_H-canaliculatus_M_contigs7806.1.1 ID=mRNA_H-canaliculatus_M_contigs7806.1.1|Name=mRNA_H-canaliculatus_M_contigs7806.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=297bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7806:17..2280- (Hapterophycus canaliculatus Oshoro7m male)back to top |