mRNA_H-canaliculatus_M_contigs78.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs78.1.1
Unique NamemRNA_H-canaliculatus_M_contigs78.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC4_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 1.410e-144
Identity = 233/293 (79.52%), Postives = 251/293 (85.67%), Query Frame = 1
Query:    1 QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALAEGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
            +RVLPVIDLAS+QPD+LGWQLREMNHLVLPHIK  VLEAAL ATQGPGDGVAVTLDN+K+M+SRD GE+DLTSSQCVFAQA+RQL +TDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFS D DLL+PCPNGRHAVGQNNEKFVPN QHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRML   L      +  V T ++    A     +    T      MYG+RLFFTYTGSDGVEREL+PGGAARRVTF+NRL FCRMVE+AR HEFDAQ
Sbjct: 6166 ERVLPVIDLASRQPDSLGWQLREMNHLVLPHIKVPVLEAALIATQGPGDGVAVTLDNIKAMVSRDRGERDLTSSQCVFAQAYRQLCDTDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSQDFDLLVPCPNGRHAVGQNNEKFVPNSQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRML--GLHVDFEDLSMVDTIITQFITAIRTCENDGLTTDEEFRGMYGDRLFFTYTGSDGVERELTPGGAARRVTFENRLTFCRMVEQARMHEFDAQ 6456          
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: HECT (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C961_9STRA)

HSP 1 Score: 294 bits (752), Expect = 2.540e-94
Identity = 156/284 (54.93%), Postives = 202/284 (71.13%), Query Frame = 1
Query:   40 PDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPG-DGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALAEGLLRSHQCATLWVDAFM---YGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
            P T   Q+R+ N+L+LPH+K+ VLEAA+ AT+G G + + VTLDN+++  S   GE D+ +SQC+FAQAFRQL+  D ++LRTVWDG+RVFQ+NFVGEDGVDAGGVFR+ ++R+ +DLFSP   L  PCPN RHA G N EK+VP+   +S LAL  L FVGRLMG+SLRTRL LPF+LP L+WKR++   L  +L  +  +   ++C  L    +R+ +   +  DA     YG++L FTYTGSDGVEREL PGG  R VTF NR AFC +VE  R HEFD Q
Sbjct:    7 PRTPPSQVRQANYLILPHVKSRVLEAAMHATRGAGGETLGVTLDNLRAAASLARGETDIAASQCLFAQAFRQLAHRDAQLLRTVWDGDRVFQVNFVGEDGVDAGGVFRDAVTRVTDDLFSPRFALFAPCPNARHATGLNGEKYVPS---ASALALQQLAFVGRLMGISLRTRLALPFELPSLVWKRLI--GLDANLDDLRAIDN-ITCQFLEA--IRTCEHEGIHSDAAFDAQYGDKLVFTYTGSDGVERELIPGGRERTVTFRNRHAFCDLVESRRLHEFDEQ 282          
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: HECT (domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SX25_9ARCH)

HSP 1 Score: 253 bits (647), Expect = 1.040e-76
Identity = 144/305 (47.21%), Postives = 185/305 (60.66%), Query Frame = 1
Query:    1 QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLE---AALTATQGPGDGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALAEGLLRS-HQCATLWVDAFMYGERLF--------FTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
            + +LP+IDL++  P +LG  +R+ N  +L  +K   LE   AA  AT G     +VTLDN K++ S+D GEK+ ++ Q  F Q FRQL   DP + R +   +RVFQINF  E GVDAGGVFREG+SR+VEDLFS   +LL+ CPNG+ AV    +K+VPNP+HS PLAL M  FVGRLMG+S+R +LCLPF  P LIWK++L           V        D +A   L S  +C    VD  + GE  F        FTY GSD +EREL  GG+ + VTF NRL +C+ V  AR  EFD Q
Sbjct:  174 ESLLPLIDLSNDDPSSLGAVIRKSNGYLLSQVKMPALEKAIAASAATSGADIPASVTLDNFKALHSKDKGEKEPSTCQNTFVQCFRQLHPKDPSLFRYIISADRVFQINFQNESGVDAGGVFREGVSRIVEDLFSDHFNLLLLCPNGQQAVHSGMDKYVPNPKHSGPLALEMFEFVGRLMGMSIRAKLCLPFDFPPLIWKKIL--------GETVSTLDLGEVDMIAMQQLDSMEKCDEDTVDPVL-GEEAFQERFPNLKFTYMGSDQIERELEVGGSNKLVTFTNRLEYCKAVRTARLSEFDQQ 469          
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVM0_HETAK)

HSP 1 Score: 249 bits (637), Expect = 2.400e-76
Identity = 132/294 (44.90%), Postives = 179/294 (60.88%), Query Frame = 1
Query:    1 QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALR-RHLAAVVYVSTFLSCDALAEGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
            +R LP +DL ++ P  LG +LR   H V   +K  +LE AL  T G G G  V LD+ K++L++D  E+   +SQC+F QAF+QL +  P+ LR    G RVF + F GE G+DAGGV+RE ++ MVEDL SPD  L + CPNG+H V  N +K+VP+P H SPLA+ ML FVG+LMG+SLRT+  LPF LP  +WK +L + L    LA +  ++         EG+ ++   A        YG+ + +T  G DG + EL PGGAAR VT+  RL +CR  E  R HE D Q
Sbjct:   50 RRALPAVDLRTRTPWRLGARLRRAGHCVFHDLKARLLEEALRETAGAGGGGQVVLDHAKALLAKDREERAPATSQCIFVQAFQQLHDRPPEALRLTEAGGRVFHVQFAGEAGIDAGGVYREAVTEMVEDLHSPDFGLFVLCPNGQHQVAVNTDKYVPSPAHESPLAMQMLEFVGKLMGISLRTKATLPFSLPAFVWKGVLGQPLTLADLAGIDAIAVEFLEALREEGMTQADFDAA-------YGDVVTWTTAGCDGAQVELVPGGAARPVTWATRLEYCRRAERHRLHELDRQ 336          
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Hect (e3 ubiquitin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSE1_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.080e-74
Identity = 146/298 (48.99%), Postives = 192/298 (64.43%), Query Frame = 1
Query:    1 QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPG-DGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPD-LDLLIPCPNGRHAVGQNNEKFVPNPQHSS-PLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVR-ALRRHLAAVVYVSTFLSCDALAEGLLRSHQ-CATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
            QR+LP +DLA+    +LG +LR +  LVL  +K AV+EA    T G G + + +TLDN  +  S ++ E+D+T+S+C+F QAFR L   D +VLR+ WDG+RVFQ+ F GE+G DAGGVFREGMSR++EDL+SP+ L+LLIPCPN +H +  N +KF+PNPQ ++ PLAL M  FVG+LMG+SLR  LCLPF  P LIWKR+L    LR  + AV         D L   LL S + C         +G  L F  TG DG E EL PGG+   VTF  R A+C ++ E   H+ DAQ
Sbjct: 1165 QRLLPFVDLANPCRHSLGAKLRALAPLVLRDVKMAVVEAGKERTLGSGGNSLTITLDNFAASRSMEAAERDVTTSRCIFVQAFRALHHKDSQVLRSCWDGDRVFQVTFRGENGSDAGGVFREGMSRVLEDLYSPETLNLLIPCPNAQHGLPTNTDKFLPNPQLATCPLALEMFEFVGKLMGMSLRANLCLPFHFPSLIWKRLLGHEVLRSDMEAV---------DTLTSRLLDSVRGCEDEAEFEGKFGGSLTFVATGYDGDEVELIPGGSMEDVTFATRQAYCDLLSERYLHDSDAQ 1453          
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: HECT (domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MCV0_9STRA)

HSP 1 Score: 226 bits (575), Expect = 2.720e-63
Identity = 127/303 (41.91%), Postives = 181/303 (59.74%), Query Frame = 1
Query:   10 LPVIDLA-SKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDG-------VAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGE-RVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALA----EGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
            LP++DL  +K P T+  +LR+++H +   +K+A++EAA+ AT  PG+          +TLD M+++ SRD  E + + S+C FAQAFRQL   DP +LR   D + R+F + F GE+GVD GGV+REG + MV+DLFSP   L + CPNG+H  G N   ++PNP+ +SP+A+ M  FVG+L+G+SLRTR   PF LP L+WK++L + L R              D +A    +G+    + AT +      G  L FT +   G E EL+PGG    V F NRL +CR+ E AR  E  AQ
Sbjct: 1458 LPLLDLRDTKSPWTIAHRLRQLSHCIFFDVKSALVEAAVEATNVPGETSGSSQQTARITLDRMQALESRDDREMEPSVSECFFAQAFRQLHAVDPALLRRQIDSKGRLFSVKFRGEEGVDWGGVYREGATSMVDDLFSPHFSLFVLCPNGQHDTGNNRGMYLPNPKCTSPVAMQMFAFVGQLLGISLRTRGDFPFMLPSLVWKQLLGQTLTRSDLEDTDAMFIQMLDGIANCENDGISTEEEFATAFA-----GLELRFTASSCTGEEIELAPGGRQLTVEFHNRLEYCRLAERARLEECSAQ 1755          
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SYJ1_9STRA)

HSP 1 Score: 224 bits (572), Expect = 7.420e-63
Identity = 127/303 (41.91%), Postives = 180/303 (59.41%), Query Frame = 1
Query:   10 LPVIDLA-SKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDG-------VAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGE-RVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALA----EGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
            LP++DL  +K P T+  +LR+++H +   +K+A++EAA+ AT  PG+          +TLD M+++ SRD  E + + S+C FAQAFRQL   DP +LR   D + R+F + F GE+GVD GGV+REG + MV+DLFSP   L   CPNG+H  G N   ++PNP+ +SP+A+ M  FVG+L+G+SLRTR   PF LP L+WK++L + L R              D +A    +G+    + AT +      G  L FT +   G E EL+PGG    V F NRL +CR+ E AR  E  AQ
Sbjct: 4563 LPLLDLRDTKSPWTIAHRLRQLSHCIFFDVKSALVEAAVEATNVPGETSGSSQQTARITLDRMQALESRDDREMEPSVSECFFAQAFRQLHAVDPALLRRQIDSKGRLFSVKFRGEEGVDWGGVYREGATSMVDDLFSPHFSLFFLCPNGQHDTGNNRGMYLPNPKCTSPVAMQMFAFVGQLLGISLRTRGDFPFMLPSLVWKQLLGQTLTRSDLEDTDAMFIQMLDGIANCENDGISTEEEFATAFA-----GLELRFTASSCTGEEIELAPGGRQLTVEFHNRLEYCRLAERARLEECSAQ 4860          
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4G4_9STRA)

HSP 1 Score: 207 bits (528), Expect = 8.640e-63
Identity = 117/263 (44.49%), Postives = 159/263 (60.46%), Query Frame = 1
Query:   97 KNAVLEAAL---TATQGPGDGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQH-SSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALAEGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFD 873
            K  +L+ A+   T T G      V LDN KS+ SRD GEKD  SSQ  F QAF+QL E D  V R +   +RVFQ +FVGE G+DAGGV+RE MSR+VEDLFS   DLL+ CPN +  V  N +K++PNPQH  S L   M  F+G+LM +S+RT+L LPF+ P ++WK+++           V +  F++ DA+A    +  +    W    +   +L F + GSD VEREL PGG  + VT +NR+ +C  V  AR +EF+
Sbjct:    1 KTPLLDTAVSSTTVTSGKDCPANVILDNAKSLHSRDRGEKDPVSSQNCFVQAFQQLREKDSLVYRCLTSSDRVFQTSFVGESGIDAGGVYREAMSRIVEDLFSEHFDLLLLCPNAQQQVHSNMDKYIPNPQHIGSKLVREMFEFIGKLMAVSVRTKLYLPFEFPPIVWKKLV--------GEDVGLEDFMAMDAIA---CKQVEAVRAWDLETVDPSKLRFEHQGSDKVERELVPGGKNKAVTCENRVDYCDAVVAARLNEFN 252          
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A2G8_PHYSP)

HSP 1 Score: 220 bits (561), Expect = 2.220e-61
Identity = 126/308 (40.91%), Postives = 181/308 (58.77%), Query Frame = 1
Query:    1 QRVLPVIDLA-SKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDG---------VAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGE-RVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALA----EGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
            Q  LP++DL  +K P T+  +LR+++H +   +K+A++EAA+ AT   G+            +TLD M+++ SRD  E + + S+C FAQAFRQL++ DP +LR   D + R+F + F GE+GVD GGV+REG + MV+DLFSP   L + CPNG+H  G N   ++PNP+ +SP+A+ M  FVG+L+G+SLRT    PF LP L+WK++L + L R              D +A    +G+    + AT +      G  L FT +   G E EL PGG    V F NRL +CR+ E AR  E  AQ
Sbjct: 5388 QHCLPLLDLRDTKSPWTIAHRLRQLSHCIFFDVKSALVEAAIEATNVAGETSGSSSQQQTARITLDRMQALESRDDREVEPSVSECFFAQAFRQLNQVDPALLRRQIDSKGRLFSVKFRGEEGVDWGGVYREGATSMVDDLFSPHFSLFVLCPNGQHDTGNNRGMYLPNPKCTSPVAMQMFAFVGQLLGISLRTHGDFPFMLPSLVWKQLLGQPLTRSDLEGTDAMFIQMLDGIANCENDGISTEEEFATAFA-----GLELRFTASSCTGEEIELVPGGRHLTVGFYNRLEYCRLAERARLEECSAQ 5690          
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: HECT (domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FIH1_9STRA)

HSP 1 Score: 219 bits (558), Expect = 4.290e-61
Identity = 125/308 (40.58%), Postives = 180/308 (58.44%), Query Frame = 1
Query:    1 QRVLPVIDLA-SKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDG---------VAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGE-RVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALA----EGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
            Q  LP++DL  +K P T+  +LR+++H +   +K+A++EAA+ AT   G+            +TLD M+++ SRD  E + + S+C FAQAFRQL++ DP +LR   D + R+F + F GE+GVD GGV+REG + MV+DLFSP   L + CPNG+H  G N   ++PNP+ +SP+A+ M  FVG+L+G+SLRT    PF L  L+WK++L + L R              D +A    +G+    + AT +      G  L FT +   G E EL PGG    V F NRL +CR+ E AR  E  AQ
Sbjct:  756 QHCLPLLDLRDTKSPWTIAHRLRQLSHCIFFDVKSALVEAAIEATNVVGETSGSSSQQQTARITLDRMQALESRDDREVEPSVSECFFAQAFRQLNQVDPALLRRQIDSKGRLFSVKFRGEEGVDWGGVYREGATSMVDDLFSPHFSLFVLCPNGQHDTGNNRGMYLPNPKCTSPVAMQMFAFVGQLLGISLRTHGDFPFMLASLVWKQLLGQTLTRSDLEGTDAMFIQMLDGIANCEKDGIFTEEEFATAFA-----GLELRFTASSCTGEEIELVPGGRHLTVEFHNRLEYCRLAERARLEECSAQ 1058          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.410e-14479.52protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
HECT2.540e-9454.93domain-containing protein n=1 Tax=Tribonema minus ... [more]
HECT1.040e-7647.21domain-containing protein (Fragment) n=1 Tax=archa... [more]
Hypothetical2.400e-7644.90protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hect1.080e-7448.99e3 ubiquitin n=1 Tax=Nannochloropsis gaditana TaxI... [more]
HECT2.720e-6341.91domain-containing protein n=1 Tax=Phytophthora ale... [more]
Uncharacterized7.420e-6341.91protein n=1 Tax=Phytophthora cactorum TaxID=29920 ... [more]
Hypothetical8.640e-6344.49protein (Fragment) n=2 Tax=Spumella elongata TaxID... [more]
Uncharacterized2.220e-6140.91protein n=1 Tax=Phytophthora sojae (strain P6497) ... [more]
HECT4.290e-6140.58domain-containing protein n=2 Tax=Phytophthora rub... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs78contigH-canaliculatus_M_contigs78:4328..7010 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FVC4
Preferred nameHERC1
PFAMsCLTH,HECT,RCC1,SPRY,WD40
Model size879
Max annot lvl2759|Eukaryota
KEGG koko:K10594,ko:K12864
KEGG Pathwayko03040,ko04120,map03040,map04120
KEGG ModuleM00353
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005829,GO:0006109,GO:0006111,GO:0006508,GO:0006511,GO:0006807,GO:0006808,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010498,GO:0010675,GO:0010677,GO:0010906,GO:0012505,GO:0016020,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045721,GO:0045912,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051020,GO:0051603,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0098772,GO:1901564,GO:1901565,GO:1901575
Exons5
Evalue2.31e-145
EggNOG OGsCOG5184@1|root,KOG1477@1|root,KOG1426@2759|Eukaryota,KOG1477@2759|Eukaryota
EC2.3.2.26
Descriptionprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
Cds size879
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854115.8446167-CDS-H-canaliculatus_M_contigs78:4327..44621696854115.8446167-CDS-H-canaliculatus_M_contigs78:4327..4462Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs78 4328..4462 +
1696854115.8569953-CDS-H-canaliculatus_M_contigs78:4785..49621696854115.8569953-CDS-H-canaliculatus_M_contigs78:4785..4962Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs78 4786..4962 +
1696854115.8676767-CDS-H-canaliculatus_M_contigs78:5220..53581696854115.8676767-CDS-H-canaliculatus_M_contigs78:5220..5358Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs78 5221..5358 +
1696854115.8864272-CDS-H-canaliculatus_M_contigs78:5900..61731696854115.8864272-CDS-H-canaliculatus_M_contigs78:5900..6173Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs78 5901..6173 +
1696854115.8983266-CDS-H-canaliculatus_M_contigs78:6854..70101696854115.8983266-CDS-H-canaliculatus_M_contigs78:6854..7010Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs78 6855..7010 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs78.1.1prot_H-canaliculatus_M_contigs78.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs78 4328..7010 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs78.1.1

>prot_H-canaliculatus_M_contigs78.1.1 ID=prot_H-canaliculatus_M_contigs78.1.1|Name=mRNA_H-canaliculatus_M_contigs78.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=293bp
QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDG
VAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGE
RVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQ
NNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRML
VRALRRHLAAVVYVSTFLSCDALAEGLLRSHQCATLWVDAFMYGERLFFT
YTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ
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mRNA from alignment at H-canaliculatus_M_contigs78:4328..7010+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs78.1.1 ID=mRNA_H-canaliculatus_M_contigs78.1.1|Name=mRNA_H-canaliculatus_M_contigs78.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2683bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78:4328..7010+ (Hapterophycus canaliculatus Oshoro7m male)
CAGCGCGTTCTGCCGGTGATCGACTTGGCGTCCAAGCAACCCGACACCTT AGGCTGGCAACTACGAGAGATGAACCACTTGGTTTTGCCTCACATCAAGA ACGCAGTGTTGGAGGCTGCCTTGACCGCGACACAGGTATGACGCCGTTAC AAGTGTTTGCTCTCGTTGTGGATGTGCTGGTTCGCTCAGTCGCTCAGATT TCTGTTGAATCCCCCGTCGCATCAGCAGGTGGTGAGGTATGGGGCACTTA ATCCGAGCGCTCTTGGCTCCTTAATCAAGGCATGAGCATAATTGACTTGA CATCGACATCGGTTGTTTTCAATTTTGTTTGGGTTGGTGCAGAAGATCCT GGACAGTGAGATTCAAAGAAATGTGCAACGGTGTCCGAAAGTGTGCGATG CGGACCGCGCTCATATCGCCCAGTGCCCGTCGCTTGTCACAACCATTAAT ATCGACAGGGGCCTGGAGACGGTGTCGCCGTGACCCTGGACAACATGAAG TCAATGTTGTCCCGTGATAGTGGGGAGAAAGACCTCACTTCCAGCCAGTG CGTCTTCGCCCAGGCATTTCGTCAGCTCAGTGAGACCGATCCGAAGGTTT TGCGCACAGTCTGGGATGGGGAGCGGGTATTCCAGGTGAGACGAATCGCC AACTAACCAAGCACAGTTTTCGAAGAGGTTGGCAGTGTGGCGTGGTGTGG CGTGGTGGTATTAGTACCACATTTTCTGCTTTCCGTGCCTTGTACGTTCA ATCAGCCGAATACCTCTCCACCGAAATGGTTGGAGACATGGTGCAGGTAC ACACGTTGCTGACTGATGTCTTCAGAAACACCACCTTCGCGTACCTTCGC GTCTTTTTGACTCCGATGGCATTTCCCAAACTCTCTGAATCAGATCAACT TTGTGGGAGAGGACGGCGTAGACGCTGGAGGCGTGTTTCGAGAGGGGATG TCACGCATGGTGGAGGACCTATTTTCGCCGGATTTGGACCTCCTTATACC ATGTCCCAACGGACGGCATGCTGTCGGCCAGGTGAGTTGCAGCACACATG TAGAGAAAGGAACCCTCACTGTTTTGAACTCAACAGAAGCCTCGGGGTAC GCCTCACACGGCGTACCTCAGGAGGTGTTCTAACGGTGTTGTTATGTTTT CTTAAAAAAAGGGTCCCGCCCCCTCGAAATTTATATAGCAGCCGTACAGA TTGTGGATATCGCTACTGTAAGAATGTGTTGGACGCCCGCGAGATGTTTA CTGTCAGATCACGTTGTTTCACTAGGCGTGGCAGCTATGGAGATCTCAAA ACAGACGTGATCGCGTTTGTTTGATTTCGTCAGGCAGGTTCGAAAACCGT CCAATGAGAGCCCAGGGTGACAGCCACATTGTGTAGACTGCAGCTCTATC CGCGACAGTTGTTCGCTGATCCGCTCTTTAAATTCAGATCCTTAAACCCT TTCGCCGACGATGATGGGTGCCTCATCGGCAAGACTTGCCCTCGTCGCTC ATCCCTCATGGTTCGTCCGCTGTCTTCTTTGGCTCTTTCTCTGCTCTTTT TCTGTATCTTTCTTCCGGCATAGAACAACGAGAAGTTTGTGCCCAACCCG CAGCACTCGTCACCTTTGGCTCTCTCCATGCTTCGCTTCGTTGGCCGTCT GATGGGCTTGAGTCTGAGAACTCGTCTCTGTCTGCCCTTTCAACTACCGG GGTTGATCTGGAAGCGCATGCTGGTAAGAGCCCTGCGTCGACACCTCGCT GCGGTGGTTTACGTTTCCACCTTTCTCTCTTGCGATGCTCTTGCGGAAGG ACTCCTTAGATCGCACCAGTGCGCGACTCTCTGGGTGGATGCTTTTGTCA CGAGGCCATCGTTGCATCTGTGGATCCAGCTCCACATCCGTGTCCCCTCG TGCTGGTTGGGTTGGCTTGCTTACCTGACTTTTTGCTTCCTTGTGCGCTT GCCTTGCAGGGATTGCGCGTGAGTTTTGAGGATTTGGCAATGGTGGACAT CATCATCACACAGTTCATCACGGCGATTAGGACCTGCGAGAATGATGGTT TGACTTCCGACGAAGAATTCAGGGGTGCGTGCCTCCGGTGCCTACGGTAT TTTCCTGTCGTCGTTGTGCTTTAGATTCTAGGTCGTGTGCTGGTGCCATC ATACTGCACGATCCAAGTGTCTCACTGGTCCGACAAGCTCGAAGTGCTTG AAGGCGGAAGCCGGCAAATCTTATTTTTTTTTGTTTGCACATTATCTGAC AGACTCGACCCACCCATCTGAAATTTGGTGGCTTGCCACGAGGGCAAAAA CTACACTTGCGGGTTGCGGGTTGGGAGACTGCTTGCTTATCCGTATTTAC TTCGGAAATATTCTGAACCGATCCCTCGCCCCAACCGCAAGAGTTCAGGC GCGAAAAGTGGAACCGCGTACAGGGTGGTCACCTGCCGCCTTTCTCGCCA CTGCGAGCGTCGTTGCCCACGCTGCCACTTGCAAACCTTTTTTGACCCGT GTCCTTTGAATCTTCCGGATCGCAGAGATGTACGGAGAACGATTATTTTT CACGTACACTGGTAGTGATGGTGTGGAACGAGAGCTCTCTCCTGGCGGCG CGGCTCGACGAGTCACCTTCGACAACCGTTTGGCATTCTGTCGCATGGTC GAGGAGGCTAGGACGCACGAGTTCGATGCCCAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs78:4328..7010+

>mRNA_H-canaliculatus_M_contigs78.1.1 ID=mRNA_H-canaliculatus_M_contigs78.1.1|Name=mRNA_H-canaliculatus_M_contigs78.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=879bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78:4328..7010+ (Hapterophycus canaliculatus Oshoro7m male)
CAGCGCGTTCTGCCGGTGATCGACTTGGCGTCCAAGCAACCCGACACCTT
AGGCTGGCAACTACGAGAGATGAACCACTTGGTTTTGCCTCACATCAAGA
ACGCAGTGTTGGAGGCTGCCTTGACCGCGACACAGGGGCCTGGAGACGGT
GTCGCCGTGACCCTGGACAACATGAAGTCAATGTTGTCCCGTGATAGTGG
GGAGAAAGACCTCACTTCCAGCCAGTGCGTCTTCGCCCAGGCATTTCGTC
AGCTCAGTGAGACCGATCCGAAGGTTTTGCGCACAGTCTGGGATGGGGAG
CGGGTATTCCAGATCAACTTTGTGGGAGAGGACGGCGTAGACGCTGGAGG
CGTGTTTCGAGAGGGGATGTCACGCATGGTGGAGGACCTATTTTCGCCGG
ATTTGGACCTCCTTATACCATGTCCCAACGGACGGCATGCTGTCGGCCAG
AACAACGAGAAGTTTGTGCCCAACCCGCAGCACTCGTCACCTTTGGCTCT
CTCCATGCTTCGCTTCGTTGGCCGTCTGATGGGCTTGAGTCTGAGAACTC
GTCTCTGTCTGCCCTTTCAACTACCGGGGTTGATCTGGAAGCGCATGCTG
GTAAGAGCCCTGCGTCGACACCTCGCTGCGGTGGTTTACGTTTCCACCTT
TCTCTCTTGCGATGCTCTTGCGGAAGGACTCCTTAGATCGCACCAGTGCG
CGACTCTCTGGGTGGATGCTTTTATGTACGGAGAACGATTATTTTTCACG
TACACTGGTAGTGATGGTGTGGAACGAGAGCTCTCTCCTGGCGGCGCGGC
TCGACGAGTCACCTTCGACAACCGTTTGGCATTCTGTCGCATGGTCGAGG
AGGCTAGGACGCACGAGTTCGATGCCCAG
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