mRNA_H-canaliculatus_M_contigs7777.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7777.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7777.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 3.070e-24
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWWAQHSVTLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLVTM 231
            E+L+Y+G+  +  DGNPL WW QH  T PLL+EL+ R+LCVPASSA+SERLFSKAGLTLT +R  L   RVAQLVT+
Sbjct:  486 EVLRYRGVTSMNPDGNPLTWWDQHKATFPLLRELSHRILCVPASSAASERLFSKAGLTLTKQRSLLAGNRVAQLVTL 562          
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: zinc (finger BED domain-containing protein 1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C4427)

HSP 1 Score: 74.7 bits (182), Expect = 4.940e-14
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWWAQHSVTLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLV 225
            EI +Y   P +  D +PL WW  H    PLL +   R L +PASSA +ERLFSKAG  +TAKR+ LKP++   LV
Sbjct:  282 EIARYLQFPTIDGDDDPLQWWKFHENDFPLLSQYVRRYLAIPASSAPTERLFSKAGQIVTAKRVNLKPSQANMLV 356          
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: E3 (SUMO-protein ligase ZBED1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF359)

HSP 1 Score: 74.3 bits (181), Expect = 8.760e-14
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWWAQHSVTLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLV 225
            E+++YK  PP+  + NPL WW Q  +  P L +LA  +LC+PA+S  SER+FS AG  LTA+R  LK   V +L+
Sbjct:  433 EVIQYKSEPPVSLNDNPLQWWKQRELRFPFLSKLAKCLLCIPATSVPSERVFSTAGDILTAQRASLKAKHVDKLI 507          
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT4_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 9.000e-14
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWWAQHSV--TLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLVT 228
            E+L+Y+ L  +  + +PL WW Q     + P L+EL  RVLCVPA SASS+R+FSK GL   +KR RL+ +RVA  +T
Sbjct:  824 EVLRYRALDKIDSEADPLLWWEQEQQRWSFPFLRELVMRVLCVPACSASSKRVFSKTGLVDNSKRARLRGSRVAPRLT 901          
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ9_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.620e-13
Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWW--AQHSVTLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLVT 228
            E+L+Y+ L  +  + +PL WW   Q   + P L++LA RVLCVPA SASS+RLF K G+   +KR RL+ +RVAQ +T
Sbjct:  390 EVLRYRALDKIDSESDPLLWWEQGQQRWSFPSLRQLAMRVLCVPACSASSKRLFFKTGVVGNSKRARLRGSRVAQRLT 467          
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: E3 (SUMO-protein ligase ZBED1-like n=1 Tax=Cyprinodon tularosa TaxID=77115 RepID=UPI0018E24B7F)

HSP 1 Score: 72.8 bits (177), Expect = 3.090e-13
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWWAQHSVTLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLV 225
            E+  Y   P +  + +PLAWW  H+V  P L  LA + LC+PA+SA SERLFS +G  +T +R  LKPARV  LV
Sbjct:  541 ELDNYLITPSIDGEQDPLAWWRVHNVNFPWLSRLARKYLCIPATSAPSERLFSASGNIVTCQRASLKPARVDMLV 615          
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: E3 (SUMO-protein ligase ZBED1-like n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=UPI000D53087B)

HSP 1 Score: 72.0 bits (175), Expect = 3.470e-13
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWWAQHSVTLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLV 225
            E+  Y   PP  ++ +PLAWW  H V  P + +LA + LC+ A+SA+SERLFS  G  +T +R  LKPA V +LV
Sbjct:  218 ELNTYLQYPPADEESDPLAWWRLHEVNFPHVSQLAKKYLCIQATSAASERLFSTGGNIVTCQRSALKPATVNRLV 292          
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: zinc (finger BED domain-containing protein 1-like n=14 Tax=Pseudocrenilabrinae TaxID=318546 RepID=UPI000DF2B790)

HSP 1 Score: 68.2 bits (165), Expect = 8.780e-13
Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWWAQHSVTLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLV 225
            E+  Y   P +  + +PLAWW  H++  P L ++A + LCVPA+SA SERLFS  G  +T  R  LKPA+V  LV
Sbjct:   61 ELNSYLLTPVIDGEDDPLAWWKVHNIHFPRLCKMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKPAKVDMLV 135          
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: E3 (SUMO-protein ligase ZBED1-like n=3 Tax=Acanthomorphata TaxID=123368 RepID=UPI0018E2124D)

HSP 1 Score: 71.2 bits (173), Expect = 1.060e-12
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWWAQHSVTLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLV 225
            E+  Y   P +  + +PLAWW  H+V  P L  LA + LC+PA+SA SERLFS +G  +T +R  LKP RV  LV
Sbjct:  416 ELDNYLITPSIDGEQDPLAWWRVHNVNFPWLSRLARKYLCIPATSAPSERLFSASGNIVTCQRASLKPTRVDMLV 490          
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Match: zinc (finger BED domain-containing protein 1 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=UPI00168D15D3)

HSP 1 Score: 70.5 bits (171), Expect = 1.470e-12
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    1 EILKYKGLPPLRQDGNPLAWWAQHSVTLPLLQELASRVLCVPASSASSERLFSKAGLTLTAKRIRLKPARVAQLV 225
            E+  Y  LP +  + NPL WW  H V  P + +LA + LC+PA+SA SER+FS  G  +T +R  LKP +V +L+
Sbjct:  252 ELHSYLALPNIDSEVNPLEWWKVHKVNFPRVSQLALKYLCIPATSAPSERVFSTGGNIVTCQRAALKPDKVDKLI 326          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7777.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Dimer_Tnp_hAT3.070e-2464.94domain-containing protein n=2 Tax=Ectocarpus sp. C... [more]
zinc4.940e-1449.33finger BED domain-containing protein 1-like n=1 Ta... [more]
E38.760e-1446.67SUMO-protein ligase ZBED1-like n=1 Tax=Mercenaria ... [more]
Dimer_Tnp_hAT9.000e-1448.72domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Dimer_Tnp_hAT1.620e-1348.72domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
E33.090e-1349.33SUMO-protein ligase ZBED1-like n=1 Tax=Cyprinodon ... [more]
E33.470e-1346.67SUMO-protein ligase ZBED1-like n=1 Tax=Kryptolebia... [more]
zinc8.780e-1346.67finger BED domain-containing protein 1-like n=14 T... [more]
E31.060e-1248.00SUMO-protein ligase ZBED1-like n=3 Tax=Acanthomorp... [more]
zinc1.470e-1244.00finger BED domain-containing protein 1 n=1 Tax=Ory... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7777contigH-canaliculatus_M_contigs7777:1055..1285 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog8128.ENSONIP00000004767
PFAMsDUF4413,Dimer_Tnp_hAT
Model size231
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.23e-13
EggNOG OGsKOG1121@1|root,KOG1121@2759|Eukaryota,3A5TH@33154|Opisthokonta
Descriptionprotein dimerization activity
Cds size231
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854114.569663-CDS-H-canaliculatus_M_contigs7777:1054..12851696854114.569663-CDS-H-canaliculatus_M_contigs7777:1054..1285Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7777 1055..1285 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7777.1.1prot_H-canaliculatus_M_contigs7777.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7777 1055..1285 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7777.1.1

>prot_H-canaliculatus_M_contigs7777.1.1 ID=prot_H-canaliculatus_M_contigs7777.1.1|Name=mRNA_H-canaliculatus_M_contigs7777.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=77bp
EILKYKGLPPLRQDGNPLAWWAQHSVTLPLLQELASRVLCVPASSASSER
LFSKAGLTLTAKRIRLKPARVAQLVTM
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mRNA from alignment at H-canaliculatus_M_contigs7777:1055..1285-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7777.1.1 ID=mRNA_H-canaliculatus_M_contigs7777.1.1|Name=mRNA_H-canaliculatus_M_contigs7777.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=231bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7777:1055..1285- (Hapterophycus canaliculatus Oshoro7m male)
GAGATACTCAAGTACAAGGGGCTCCCGCCCCTTCGCCAGGACGGCAATCC CTTGGCGTGGTGGGCGCAACACAGCGTAACCTTGCCGCTTCTGCAGGAGC TCGCTTCTCGCGTCCTTTGCGTCCCGGCCTCGTCGGCGTCGTCGGAGCGT CTGTTCTCCAAGGCAGGGCTCACCTTAACCGCGAAACGCATAAGGCTCAA ACCAGCCAGGGTCGCCCAGCTGGTCACTATG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7777:1055..1285-

>mRNA_H-canaliculatus_M_contigs7777.1.1 ID=mRNA_H-canaliculatus_M_contigs7777.1.1|Name=mRNA_H-canaliculatus_M_contigs7777.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=231bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7777:1055..1285- (Hapterophycus canaliculatus Oshoro7m male)
GAGATACTCAAGTACAAGGGGCTCCCGCCCCTTCGCCAGGACGGCAATCC
CTTGGCGTGGTGGGCGCAACACAGCGTAACCTTGCCGCTTCTGCAGGAGC
TCGCTTCTCGCGTCCTTTGCGTCCCGGCCTCGTCGGCGTCGTCGGAGCGT
CTGTTCTCCAAGGCAGGGCTCACCTTAACCGCGAAACGCATAAGGCTCAA
ACCAGCCAGGGTCGCCCAGCTGGTCACTATG
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