mRNA_H-canaliculatus_M_contigs7776.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU1_ECTSI) HSP 1 Score: 361 bits (927), Expect = 2.090e-124 Identity = 192/239 (80.33%), Postives = 220/239 (92.05%), Query Frame = 1
Query: 1 MVPSTLKEVSTSTVLKWASVVIGGVCVALPAKFLLSISRLEKPTYTVSNTVRVGKVTAEVREYEPFLIAESIVSGGTMKEGTTKGFMNVARYIFGDNAGGRRAEGGEIEPEKVAMTAPVRTEQPQQAXXXXXXXXXXXLKSNLRNMKVSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRGQSPDERKVAEVSRDLFEALDHEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 717
MVPS+LKEVS +T+LKWA V+ G +CVALPAKFL+S+SRLE+PTYTVS TVRVG++ AEVR+YEP+LIAES+VSG TM+EGTTKGFMNVA YIFGDNAGGR +E GE+EP +VAMTAPVRTEQPQ+AXXXXXXXXXXXLKSN RNMKVSFVMPKKY+A TLPKPK+G VKI+SV AHRMVA+RFRG SPDE+KVAEVSR+LF+AL+ EGLTPKGGL++YQY PPFMPGFLR NEVAVRV
Sbjct: 1 MVPSSLKEVSKATLLKWAGVLTGAICVALPAKFLVSVSRLERPTYTVSKTVRVGRLAAEVRDYEPYLIAESVVSGETMREGTTKGFMNVAGYIFGDNAGGRVSEDGEVEPAQVAMTAPVRTEQPQKAXXXXXXXXXXXLKSNFRNMKVSFVMPKKYTAGTLPKPKDGRVKIKSVGAHRMVAVRFRGPSPDEKKVAEVSRELFQALEGEGLTPKGGLLVYQYQPPFMPGFLRTNEVAVRV 239
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VRX5_TETOB) HSP 1 Score: 135 bits (340), Expect = 1.930e-35 Identity = 100/239 (41.84%), Postives = 129/239 (53.97%), Query Frame = 1
Query: 61 VIGGVCVALPAKFLLSISRLEKPTYTVSNTVR------VGKVTAEVREYEPFLIAESIVSGGTMKEGTTKGFMNVARYIFGDNAGGRRAEGGEIEPEKVAMTAPVRTE---------QPQQAXXXXXXXXXXXLKSNLRN-----MKVSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRGQSPDERKVAEVSRDLFEALDHEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 717
V+GGV V P + + EKP YTV + G+ AE+R+Y P LIAE V GGTM++ ++ GF +A +IFG+N + EK+AMT+PVR E Q XXXXXXXXXXX +L N +K+SFVMP KY A TLPKP N +V+I+ V H + FRG V ++L L EGL P G + +YQYHPPF G+ R NEV V
Sbjct: 14 VVGGVAVLWPIGIWWEVRKCEKPKYTVIRPLGSQRNWWTGRSPAELRQYAPMLIAEVAV-GGTMRQASSSGFRKIANFIFGNNTAAGQGS------EKIAMTSPVRMEVEGSKKQQGSSQXXXXXXXXXXXXXXXXSLPNDAAGDVKMSFVMPSKYDAATLPKPNNPDVQIKEVPGHTAAVLTFRGHVRGRELVERKKQELATLLAAEGLVPVGEVKLYQYHPPFTYGWQRVNEVLFEV 245
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: SOUL (heme-binding protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEN8_9CHLO) HSP 1 Score: 131 bits (329), Expect = 9.230e-34 Identity = 98/243 (40.33%), Postives = 129/243 (53.09%), Query Frame = 1
Query: 61 VIGGVCVALPAKFLLSISRLEKPTYTVSNTVR------VGKVTAEVREYEPFLIAESIVSGGTMKEGTTKGFMNVARYIFGDNAGGRRAEGGEIEPEKVAMTAPVRTE--------QPQQAXXXXXXXXXXXL----------KSNLRNMKVSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRGQSPDERKVAEVSRDLFEALDHEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 717
V+GG V P + + EKP +TV + G+ AE+R+Y P LIAE VSG TM++ ++ GF +A +IFG+N + EK+AMT+PVR E QQ XXXXXXXXXXX S ++K+SFVMP KY+A +LPKP N +V IR V H + FRG V + ++L L EGL P G + +YQYHPPF G+ R NEV V
Sbjct: 14 VVGGAAVLWPVGIWWEVRKCEKPKHTVIRPLGRQRNWWTGRSPAELRQYAPMLIAEVTVSG-TMRQASSSGFRKIANFIFGNNTAAGQGN------EKIAMTSPVRMEIEGSGKSSSKQQGXXXXXXXXXXXXXXXXXTESLPNSATGDVKMSFVMPSKYNAASLPKPNNADVAIREVPGHTAAVLTFRGHVRGRDLVEKKKQELVALLAEEGLVPVGDVKLYQYHPPFTYGWQRVNEVLFEV 249
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P5D1_9CHLO) HSP 1 Score: 130 bits (326), Expect = 2.390e-33 Identity = 100/247 (40.49%), Postives = 131/247 (53.04%), Query Frame = 1
Query: 37 TVLKWASVVIGGVCVALPAKFLLSISRLEKPTYTVSNTVRVGKVT-----------AEVREYEPFLIAESIVSGGTMKEGTTKGFMNVARYIFGDN--AGGRRAEGGEIEPEKVAMTAPVRTE-QPQQAXXXXXXXXXXXLKSNLRN------MKVSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRGQSPDERKVAEVSRDLFEALDHEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 717
T L A V GG + P I + EKP Y V + G AEVR YEP L+AE V G M+E +++GF +AR+IFG N AGG GG + VAMT+PVR E P + XXXXXXX S +++SFVMP KY+ TLP+P + V+I+ V AH + A+ FRGQ + V + + L E L EG+TP+G + + QYHPPF G R NEV R+
Sbjct: 9 TALVVAGSVAGGAALLWPLVIAYEIRKCEKPKYAVLRALAAGPGDRRRFRLGFGQYAEVRRYEPMLVAEVEVEGN-MRETSSQGFRKIARFIFGANTAAGG----GGS---QAVAMTSPVREELMPSEXXXXXXXXVMAMGGSESLGADEKGTVRMSFVMPSKYTKETLPRPNDPSVEIKEVPAHTVAALTFRGQVRNRTVVEQRKQQLLEILKAEGITPEGAVQLNQYHPPFTYGIQRVNEVLFRI 247
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RNX4_9CHLO) HSP 1 Score: 125 bits (313), Expect = 2.020e-31 Identity = 97/237 (40.93%), Postives = 129/237 (54.43%), Query Frame = 1
Query: 52 ASVVIGGVCVALPAKFLLSISRLEKPTYTVSNTVRV--------GKVTAEVREYEPFLIAESIVSGGT-MKEGTTKGFMNVARYIFGDNAGGRRAEGGEIEPEKVAMTAPVRTEQPQQAXXXXXXXXXXXLK------SNLRNMKVSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRGQSPDERKVAEVSRDLFEALDHEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 717
A V+G + VA P L + LEKP Y V + G+ AE+R Y P L+AE V G M+ +GF VA +IFG+N GG+ E VAMT+PV E + XXXXXXXXXX + +V+F MP KY+ TLPKPK+ +V +R V + + A+ F G P E +VA+ +R L L+ EGL G L ++QYHPPF PGF+R NEV + V
Sbjct: 15 AGSVVGLLAVAWPVASWLQVKVLEKPAYKVVRQLGRSHKLGWLRGEYGAELRRYAPILVAEVEVRGAADMRSALNQGFRKVASFIFGNNTS-VVTPGGK---ESVAMTSPVVLEVSGKGKXXXXXXXXXXXXXXGSGPDGQKVYRVAFTMPSKYTPATLPKPKDPDVVVREVPSRTLAALGFSGNLPSEARVADKARALRALLEAEGLKAHGPLHVWQYHPPFAPGFVRVNEVLLEV 247
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KEE6_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.110e-29 Identity = 94/232 (40.52%), Postives = 129/232 (55.60%), Query Frame = 1
Query: 52 ASVVIGGVCVALPAKFLLSI------SRLEKPTYTVSNTVRVGKVTAEVREYEPFLIAESIVSGGTMKEGTTKGFMNVARYIFGDNAGGRRAEGGEIEPEKVAMTAPVRTEQPQQAXXXXXXXXXXXLKSNLRNMK--VSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRGQSPDERKVAEVSRDLFEALDHEGLTPKGG-LMIYQYHPPFM-PGFLRRNEVAVRV 717
+ +++G V + A++ + +LEKP YTV + G E+R+YEP++IAE+ V G +E T+ GF A YIFG N R G + EK+AMTAPVR XXXXXXXXXX RN K VSFV+ KY+ +++PKP + V IR V H + F G P + +VA + + AL+ GL P ++Y YH PF+ P FLRRNEVAV +
Sbjct: 27 SKILVGAVAILGTARYSFGLYGWRIAEKLEKPVYTVIQKLPGG---VELRQYEPYMIAETTVDGVGFREPTSSGFRACAGYIFGKNKPRR----GMADGEKMAMTAPVRVSGQTSPVXXXXXXXXXXXXXXGRNKKTRVSFVIGSKYTRKSVPKPMDRNVSIRQVPRHVLATKTFAGPPPSDDRVATERQKIEYALETVGLKPTDDETLVYGYHDPFITPNFLRRNEVAVYI 251
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFV7_9CHLO) HSP 1 Score: 110 bits (275), Expect = 3.340e-26 Identity = 79/225 (35.11%), Postives = 107/225 (47.56%), Query Frame = 1
Query: 55 SVVIGGVCVALPAKFLLSISRLEKPTYTVSNTVRVGKVTAEVREYEPFLIAESIVSGGT-MKEGTTKGFMNVARYIFGDNAGGRRAEGGEIEPEKVAMTAPVRTEQPQQAXXXXXXXXXXXLKSNLRNMKVSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRG--QSPDERKVAEVSRDLFEALDHEGLT-PKGGLMIYQYHPPFMPGFLRRNEVAVRV 717
SVV + A PA + +LEKP Y V T+ K E+R YEP+++AE GT M + GF +A YIF + E +K+AMT+PVR E KVSFVMP KY+ LP N EV IR V + A+ F G +S + + + + + L LT +M+YQYHPPF GFLR+NEV ++V
Sbjct: 6 SVVAAAILAAWPALVAYEVKKLEKPKYRVVKTLLGKKNKVEIRTYEPYVVAEYEAKEGTDMDNALSGGFRAIAGYIFARDQ-------PETTKQKIAMTSPVRLEM-----------------EGGEKHKVSFVMPSKYNKDNLPPCNNQEVNIREVGETTVAALTFSGSRRSITPKTIHDKKNRILDVLRENDLTGDPETVMVYQYHPPFTLGFLRKNEVLLKV 206
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SXM1_9CHLO) HSP 1 Score: 103 bits (257), Expect = 4.980e-24 Identity = 64/162 (39.51%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 232 MKEGTTKGFMNVARYIFGDNAGGRRAEGGEIEPEKVAMTAPVRTEQPQQAXXXXXXXXXXXLKSNLRNMKVSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRGQSPDERKVAEVSRDLFEALDHEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 717
++ G GF VA YIFG N+ R G EK++MT+PV E +VSF+MP KY TLP+P + + I+ A R+ AIR+ G SPD+ KVAE+++ L L G P G M++QYHPPF P F+R+NEV +RV
Sbjct: 8 LRSGIGAGFKGVAGYIFGKNSAVGRKAGVS---EKISMTSPVAAELLPHGVY-----------------RVSFMMPSKYRMDTLPQPHDDAICIKERPACRLAAIRWTGASPDKGKVAEMAQRLRAKLQAAGEMPHGHPMLWQYHPPFAPAFMRQNEVLLRV 149
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: Heme-binding (protein n=1 Tax=Thiorhodococcus minor TaxID=57489 RepID=A0A6M0K2D3_9GAMM) HSP 1 Score: 102 bits (254), Expect = 4.560e-23 Identity = 79/212 (37.26%), Postives = 114/212 (53.77%), Query Frame = 1
Query: 82 ALPAKFLLSISRLEKPTYTVSNTVRVGKVTAEVREYEPFLIAESIVSGGTMKEGTTKGFMNVARYIFGDNAGGRRAEGGEIEPEKVAMTAPVRTEQPQQAXXXXXXXXXXXLKSNLRNMKVSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRGQSPDERKVAEVSRDLFEALDHEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVRV 717
A A F+L + +E P Y V + G E+R+Y ++AE + GT KE + GF +A YIF G R VAMTAPV + +Q XXXXXXXX + R V F+MP Y+ LP P + +V+++ + R+ A+RF G++ D +AE + L E L+ +GL+P + Y+ PF PGFLRRNEV +R+
Sbjct: 17 AAMAVFVLIVQNVETPDYEVVR--KEGPF--EIRQYPSLVVAE-VARKGTRKEALSAGFSPLAGYIFAKERSGDR----------VAMTAPVTQQLAEQXXXXXXXXXAPADDGSWR---VRFIMPAAYALEALPPPASPDVRLQELPTQRVAAVRFSGRTTDA-TIAEQEQALREWLEAQGLSPADAPVYAYYNDPFTPGFLRRNEVMIRI 209
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Match: Heme-binding-like (protein At3g10130, chloroplastic n=2 Tax=Methylophilaceae TaxID=32011 RepID=A0A388PV36_9PROT) HSP 1 Score: 102 bits (253), Expect = 4.930e-23 Identity = 80/180 (44.44%), Postives = 109/180 (60.56%), Query Frame = 1
Query: 175 EVREYEPFLIAESIVSGGTMKEGTTKGFMNVARYIFGDNAGGRRAEGGEIEPEKVAMTAPVRTEQPQQAXXXXXXXXXXXLKSNLRNMKVSFVMPKKYSARTLPKPKNGEVKIRSVEAHRMVAIRFRGQSPDERKVAEVSRDLFEALDHEGLTPKGGLMIYQYHPPFMPGFLRRNEVAVR 714
EVREY+P LIA+ +V+G T ++KGF +A +IFG+N + EG P+K+ MTAPV T + A XXXXXXXXXX + R VSF MPK+++ TLP P N E+KI V A + I F G E+K AE+ L E + + PKG ++ +Y+PP+ FLRRNE+ R
Sbjct: 36 EVREYQPKLIAQVLVTG-TFDTASSKGFRLLADFIFGNN---KTNEG----PKKIDMTAPVIT---RDASXXXXXXXXXXXEETERGWYVSFNMPKQFTKETLPIPNNPEIKITEVPAEKFAVITFSGLVR-EKKYAEMLSLLNEEMKKRNIEPKGSPILARYNPPWTLPFLRRNELMFR 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7776.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7776.1.1 >prot_H-canaliculatus_M_contigs7776.1.1 ID=prot_H-canaliculatus_M_contigs7776.1.1|Name=mRNA_H-canaliculatus_M_contigs7776.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=240bp MVPSTLKEVSTSTVLKWASVVIGGVCVALPAKFLLSISRLEKPTYTVSNTback to top mRNA from alignment at H-canaliculatus_M_contigs7776:1774..5037+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7776.1.1 ID=mRNA_H-canaliculatus_M_contigs7776.1.1|Name=mRNA_H-canaliculatus_M_contigs7776.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3264bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7776:1774..5037+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7776:1774..5037+ >mRNA_H-canaliculatus_M_contigs7776.1.1 ID=mRNA_H-canaliculatus_M_contigs7776.1.1|Name=mRNA_H-canaliculatus_M_contigs7776.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=720bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7776:1774..5037+ (Hapterophycus canaliculatus Oshoro7m male)back to top |