mRNA_H-canaliculatus_M_contigs777.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH4_ECTSI) HSP 1 Score: 436 bits (1122), Expect = 1.050e-149 Identity = 207/221 (93.67%), Postives = 213/221 (96.38%), Query Frame = 1
Query: 1 YVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSLPLCP 663
YVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQ LDGFKCSAM YGLDPKA+PQFRM FKEST+CF+PNGFSS QRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHL+Q+ + FS SL LCP
Sbjct: 301 YVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMGYGLDPKAYPQFRMTFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCP 521
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC2_9PHAE) HSP 1 Score: 389 bits (998), Expect = 1.260e-135 Identity = 185/198 (93.43%), Postives = 191/198 (96.46%), Query Frame = 1
Query: 70 MVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSLPLCP 663
MVNFKLLHLMCEAEGGSVLHSQ LDGFKCSAM YGLDPKA+PQFRMAFKEST+CF+PNGFSS QRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHL+Q+ + FS SL LCP
Sbjct: 1 MVNFKLLHLMCEAEGGSVLHSQHLDGFKCSAMAYGLDPKAYPQFRMAFKESTACFSPNGFSSFQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLDQAEKCFSESLALCP 198
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ46_9STRA) HSP 1 Score: 248 bits (633), Expect = 2.980e-77 Identity = 127/217 (58.53%), Postives = 151/217 (69.59%), Query Frame = 1
Query: 13 SELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSLPLCP 663
SE++G RDPH+A+HGSFSCMVNF L L EA GG L S L G + F P+GFS+LQR LK+ES+ GLR ALA++RLSQHDPDVFYKFKQ FIDK P+A EKLQNDIR D++ V+ Y+PL PSKDVAFE+GRI+MGLKDF A ELF DSQ++CGVHHVSWYNMGVC +YL+ L+ + F SL LCP
Sbjct: 215 SEMDGQRDPHIALHGSFSCMVNFYALRLFVEAAGGCALSS--LLGGR--------------------------FGPDGFSTLQRCLKEESKTPGLRSALAVVRLSQHDPDVFYKFKQAFIDKAPHASEKLQNDIRHDMRRVYSCYYPLLPSKDVAFELGRIYMGLKDFAQAVELFSDSQKHCGVHHVSWYNMGVCHYYLNQLDAAAHCFDESLALCP 403
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMV9_9STRA) HSP 1 Score: 226 bits (577), Expect = 2.310e-66 Identity = 117/223 (52.47%), Postives = 144/223 (64.57%), Query Frame = 1
Query: 1 YVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKG--PYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSLPLCP 663
YV ++ELEG RDPH+AVHGSFS MVNF L L E GG + + LDGFKC+ GL +A R AFK + F P FS+LQR +K+E L+ LALLRLS+HD +VFYKFKQV IDK PYA + +Q DIR D+ V E Y+PLQ SKDV FEIGR+ MGLKD+ A F S CG HHV+++NMG+C +YL E + + F SL L P
Sbjct: 474 YVREAELEGHRDPHIAVHGSFSVMVNFHALRLYVERLGGFAMTTPHLDGFKCAHFFLGLPREATMHTRWAFKNNIEEFGPENFSTLQRCIKEECTNPSLKHVLALLRLSRHDSEVFYKFKQVLIDKTMYPYAADNVQRDIREDIAGVEETYYPLQSSKDVCFEIGRLLMGLKDYRGAVGYFERSNELCGQHHVTYHNMGICCYYLDEFETALKCFDASLDLKP 696
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812W741_9DINO) HSP 1 Score: 188 bits (477), Expect = 6.860e-53 Identity = 92/215 (42.79%), Postives = 137/215 (63.72%), Query Frame = 1
Query: 13 SELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAG--EKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSL 651
SELEG RDPH+A+HGSFS MVN + L +A+GG L + +DGFKC+A+ +G P+ + R+A+++ F P FS +QR +KDE+ L ALA++R +Q D DVFYKFK + + +KL++D+ DVK + Y+PLQ SKD++FE+ R+ MGL + A E F+ S CG HHV+WYN+ +C F++ +++ F+ SL
Sbjct: 326 SELEGVRDPHIALHGSFSLMVNLHAVDLYAQAKGGFSLMTPYIDGFKCAAVVFGESPEGLVETRLAWEDVMVDFGPENFSCVQRCIKDETASPSLATALAVIRAAQWDSDVFYKFKATILANSSSSSVPDKLKSDLYEDVKRISATYYPLQSSKDISFELSRVLMGLGRYAEAVEGFQRSMAQCGEHHVTWYNIALCQFHMGAFPAAKELFTKSL 540
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAC6_BLAHO) HSP 1 Score: 186 bits (471), Expect = 2.340e-52 Identity = 87/222 (39.19%), Postives = 143/222 (64.41%), Query Frame = 1
Query: 1 YVHDSELEGTRD-PHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSLPLCP 663
+ H+ +L T++ PH+A+HGSFS M NF L + + GG+ H+ G + +A G P +F+ A++ F P+ FS LQR ++DE+ L+ LAL+RLS+ + +VFYKFKQV +D PYA ++LQ+D + D+ + ++PL SKDV F++GR+ MGL+D++++ LF+ S CG H+V+W+N+G+C++Y+ L++S SF+ L + P
Sbjct: 297 HAHEEDLRLTKENPHIAIHGSFSMMANFHALRQVFLSRGGASFHTPYYTGLQVAAFALGETP--LEEFQFAWENVLLAFDPDSFSQLQRCIRDETPSPSLKNILALIRLSRFESEVFYKFKQVLVDHIPYASDRLQSDFKSDILHIAANFYPLSASKDVDFDLGRLSMGLRDYETSIRLFKKSIELCGEHYVTWHNLGICYYYMDDLKESMNSFNRCLEIQP 516
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: hypothetical (protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI00071186DF) HSP 1 Score: 182 bits (463), Expect = 2.940e-51 Identity = 84/222 (37.84%), Postives = 141/222 (63.51%), Query Frame = 1
Query: 1 YVHDSELEGTRD-PHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSLPLCP 663
+ H+ +++ +++ PH+A+HGSFS M NF +HL G H+ G + +A G P +F+ A++ F P+ FS LQR ++DE+ L+ LAL+RLS ++ +VFYKFKQV +D PYA +K+Q+D + D+ + ++PL SKDV F++GR+ MGL+D++++ LF+ S CG H+V+W+N+G+C++Y+ ++ +S SF L + P
Sbjct: 288 HSHEEDMKLSKENPHMAIHGSFSFMTNFHAMHLYFVNNKGESYHTPYYSGLQVAAFVMGETP--ISEFQFAWENVLLAFDPDSFSQLQRCIRDETPSPSLKNILALVRLSHYESEVFYKFKQVLVDHIPYASDKMQSDFKNDILHIANNFYPLSTSKDVDFDLGRLSMGLRDYETSIALFKKSMDLCGEHYVTWHNLGICYYYIDNMTESMNSFDKCLKIQP 507
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJM6_ECTSI) HSP 1 Score: 179 bits (455), Expect = 1.720e-48 Identity = 93/221 (42.08%), Postives = 129/221 (58.37%), Query Frame = 1
Query: 1 YVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESRGLGLRPALALLRLSQHDPDVFYKFKQVFIDK--GPYAGEKLQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSLPL 657
Y+ D E+ G RDPH+A HGS SCMVN L GG L S ++GFKC A+ +G++ +A + R AF+ S F P FS LQR +KDE L + LLRLS+ DPDVF KF+ +D+ + D+++D + + +PLQ KDV FE R+ M LKDF++A LFR S G HHV+ +NMG+ +FYL L ++++ F SL L
Sbjct: 599 YMKDEEMAGDRDPHIAYHGSLSCMVNLDALARYTHQRGGWSLSSPYMEGFKCQALAFGMEEEALQETRFAFEGSMQAFGPESFSMLQRAVKDEVSQPSLGLVVQLLRLSRLDPDVFMKFRTSVVDQVSSQELSPSVWEDLKKDTTAIAQHCYPLQQGKDVNFEAARLLMALKDFEAALVLFRRSDSVSGEHHVTCHNMGMSYFYLGRLREAKECFERSLEL 819
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAT2_BLAHO) HSP 1 Score: 171 bits (434), Expect = 5.050e-48 Identity = 88/220 (40.00%), Postives = 128/220 (58.18%), Query Frame = 1
Query: 13 SELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESR-GLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEK--LQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSLPLCP 663
+ + G R+P+++VHGS S NF L L ++ G+V HS L+GF + G+D K P R S F P F+ Q+ LK+ES + +A+LRLS D DVF KFKQV I++G YAG + DI D+ V Y+P++ + DV FE+ RI MG+K++D+A LF DS C HHV+W+NMG+C+ Y LE +++ + SL + P
Sbjct: 163 ARVAGPRNPYISVHGSLSMPTNFHALDLFVQSLEGTVFHSPYLEGFSNTVYVVGIDAKTLPSMRWMIHHEFSTFIPESFNVTQKCLKEESSPSPSVASVIAVLRLSHFDTDVFMKFKQVLIERGGYAGSSSATRKDILFDLSAVRSQYYPIKSTYDVCFELARIHMGIKEYDTAIALFADSNENCADHHVTWHNMGMCYEYKGDLENAKRCYLKSLEIKP 382
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Match: hypothetical (protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007116803) HSP 1 Score: 166 bits (419), Expect = 1.850e-45 Identity = 83/220 (37.73%), Postives = 128/220 (58.18%), Query Frame = 1
Query: 13 SELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFKCSAMTYGLDPKAFPQFRMAFKESTSCFTPNGFSSLQRQLKDESR-GLGLRPALALLRLSQHDPDVFYKFKQVFIDKGPYAGEK--LQNDIRRDVKLVHELYFPLQPSKDVAFEIGRIFMGLKDFDSAAELFRDSQRYCGVHHVSWYNMGVCFFYLHHLEQSRQSFSLSLPLCP 663
+++ ++P++ +HGSFS NF + E G V S L+GF + G+DPK P R + S F P F+ Q+ LK+ES + +++LRL++ D DVF KFKQV I++G YAG + DI D+ V Y+P++ + DV FE+ RI MG+K++D+A +LF DS C HHV+W+NMG+C+ Y +E +++ + SL L P
Sbjct: 201 TKIAAPQNPYINIHGSFSMPTNFHAIDAFVENHNGHVFSSPYLEGFNNTVYIMGIDPKTLPTMRWMIHHAFSTFIPESFNITQKCLKEESSPSPSVAAVISVLRLARFDTDVFMKFKQVLIERGGYAGSSPATRKDILFDLSGVRSQYYPIKSTYDVCFELARIHMGIKEYDTAIKLFSDSNANCADHHVTWHNMGMCYEYKEDIENAKKCYQKSLELKP 420 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs777.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs777.1.1 >prot_H-canaliculatus_M_contigs777.1.1 ID=prot_H-canaliculatus_M_contigs777.1.1|Name=mRNA_H-canaliculatus_M_contigs777.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=221bp YVHDSELEGTRDPHLAVHGSFSCMVNFKLLHLMCEAEGGSVLHSQQLDGFback to top mRNA from alignment at H-canaliculatus_M_contigs777:203..11232+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs777.1.1 ID=mRNA_H-canaliculatus_M_contigs777.1.1|Name=mRNA_H-canaliculatus_M_contigs777.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=11030bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs777:203..11232+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs777:203..11232+ >mRNA_H-canaliculatus_M_contigs777.1.1 ID=mRNA_H-canaliculatus_M_contigs777.1.1|Name=mRNA_H-canaliculatus_M_contigs777.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=663bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs777:203..11232+ (Hapterophycus canaliculatus Oshoro7m male)back to top |