mRNA_H-canaliculatus_M_contigs7754.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7754.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7754.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: Serine/threonine-protein (phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD6_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 4.950e-21
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 1 
Query:   16 VKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            VK+ILIEENNVQLVRSPVTICGDIHGQFYDLL+LLAMGGKVPDTS
Sbjct:   27 VKEILIEENNVQLVRSPVTICGDIHGQFYDLLELLAMGGKVPDTS 71
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BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: Serine/threonine-protein (phosphatase (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3J2B7_9SPIT)

HSP 1 Score: 79.3 bits (194), Expect = 1.300e-17
Identity = 34/47 (72.34%), Postives = 43/47 (91.49%), Query Frame = 1 
Query:   10 KKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            ++VK+ILIEENNVQ V++PVTICGDIHGQFYDL++L   GG++PDTS
Sbjct:   31 ERVKEILIEENNVQPVKAPVTICGDIHGQFYDLIELFNQGGEIPDTS 77
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BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: hypothetical (protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C6F3)

HSP 1 Score: 80.9 bits (198), Expect = 5.590e-17
Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1 
Query:   10 KKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            ++VKDIL+EE+NVQLVRSPVTICGDIHGQFYDLL+L   GG++PD +
Sbjct:   26 ERVKDILLEESNVQLVRSPVTICGDIHGQFYDLLELFKTGGEIPDAN 72
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BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: Serine/threonine-protein (phosphatase n=3 Tax=Euplotidae TaxID=100127 RepID=A0A7S3KRP2_EUPCR)

HSP 1 Score: 80.5 bits (197), Expect = 8.890e-17
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   10 KKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            +KVK+ILIEENNVQ V +PVTICGDIHGQFYDLL+L + GG VPDTS
Sbjct:   39 EKVKEILIEENNVQPVSAPVTICGDIHGQFYDLLELFSKGGDVPDTS 85
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: Serine/threonine-protein (phosphatase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6KVN2_MAIZE)

HSP 1 Score: 75.5 bits (184), Expect = 2.410e-16
Identity = 33/47 (70.21%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   10 KKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            +K K+IL+EE+NVQ V+SPVTICGDIHGQF+DLL+L  +GGK PDT+
Sbjct:   39 EKAKEILMEESNVQPVKSPVTICGDIHGQFHDLLELFRIGGKCPDTN 85
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BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: Serine/threonine-protein (phosphatase n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MMI5_RHIMU)

HSP 1 Score: 75.1 bits (183), Expect = 3.330e-16
Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 1 
Query:   10 KKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            +K K+ILI+E+NVQ V+SPVTICGDIHGQF+DL +L  MGGK PDT+
Sbjct:   37 EKAKEILIQESNVQPVKSPVTICGDIHGQFHDLAELFRMGGKCPDTN 83
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BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: Serine/threonine-protein (phosphatase n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QTW4_ICHMG)

HSP 1 Score: 78.2 bits (191), Expect = 3.760e-16
Identity = 32/50 (64.00%), Postives = 45/50 (90.00%), Query Frame = 1 
Query:    1 LASKKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            +  +K+K++L+EE+NVQ VR+PVTICGDIHGQFYDLL+L  +GG++PDT+
Sbjct:   24 MVCEKIKELLMEESNVQPVRAPVTICGDIHGQFYDLLELFRVGGQIPDTN 73
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: Serine/threonine-protein (phosphatase n=2 Tax=Zoopagales TaxID=78899 RepID=A0A4P9XRX7_9FUNG)

HSP 1 Score: 78.6 bits (192), Expect = 4.280e-16
Identity = 34/47 (72.34%), Postives = 43/47 (91.49%), Query Frame = 1 
Query:   10 KKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            +KVK++L+EE+NVQ VRSPVT+CGDIHGQFYDLL+L  +GG VPDT+
Sbjct:   27 EKVKELLMEESNVQPVRSPVTVCGDIHGQFYDLLELFRVGGDVPDTN 73
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: Serine/threonine-protein (phosphatase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9J5J8_ARUDO)

HSP 1 Score: 74.7 bits (182), Expect = 4.840e-16
Identity = 33/47 (70.21%), Postives = 42/47 (89.36%), Query Frame = 1 
Query:   10 KKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            +K K+IL+EE+NVQ VRSPVTICGDIHGQF+DL++L  +GGK PDT+
Sbjct:   16 EKAKEILMEESNVQPVRSPVTICGDIHGQFHDLVELFWIGGKCPDTN 62
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BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Match: Serine/threonine-protein (phosphatase 6 catalytic subunit n=7 Tax=Dictyostelia TaxID=33083 RepID=PPP6_DICDI)

HSP 1 Score: 78.2 bits (191), Expect = 5.790e-16
Identity = 34/47 (72.34%), Postives = 43/47 (91.49%), Query Frame = 1 
Query:   10 KKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS 150
            ++VK++L+EE+NVQ VRSPVTICGDIHGQFYDLL+L   GG+VPDT+
Sbjct:   30 ERVKELLLEESNVQPVRSPVTICGDIHGQFYDLLELFKTGGEVPDTN 76
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7754.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Serine/threonine-protein4.950e-2195.56phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
Serine/threonine-protein1.300e-1772.34phosphatase (Fragment) n=1 Tax=Euplotes harpa TaxI... [more]
hypothetical5.590e-1774.47protein n=1 Tax=Acytostelium subglobosum LB1 TaxID... [more]
Serine/threonine-protein8.890e-1778.72phosphatase n=3 Tax=Euplotidae TaxID=100127 RepID=... [more]
Serine/threonine-protein2.410e-1670.21phosphatase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1... [more]
Serine/threonine-protein3.330e-1670.21phosphatase n=1 Tax=Rhizophora mucronata TaxID=611... [more]
Serine/threonine-protein3.760e-1664.00phosphatase n=1 Tax=Ichthyophthirius multifiliis (... [more]
Serine/threonine-protein4.280e-1672.34phosphatase n=2 Tax=Zoopagales TaxID=78899 RepID=A... [more]
Serine/threonine-protein4.840e-1670.21phosphatase n=1 Tax=Arundo donax TaxID=35708 RepID... [more]
Serine/threonine-protein5.790e-1672.34phosphatase 6 catalytic subunit n=7 Tax=Dictyostel... [more]

Pages

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7754contigH-canaliculatus_M_contigs7754:5053..5202 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD6
Preferred namePPP6C
PFAMsMetallophos
Model size150
Max annot lvl2759|Eukaryota
KEGG koko:K01090,ko:K15423,ko:K15427,ko:K15498
KEGG Pathwayko04922,map04922
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000082,GO:0000159,GO:0000226,GO:0000228,GO:0000235,GO:0000278,GO:0000785,GO:0000790,GO:0001302,GO:0001932,GO:0001933,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005818,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005938,GO:0006139,GO:0006140,GO:0006259,GO:0006281,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006468,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007346,GO:0007568,GO:0007569,GO:0007623,GO:0008033,GO:0008150,GO:0008152,GO:0008287,GO:0008360,GO:0009266,GO:0009268,GO:0009314,GO:0009405,GO:0009408,GO:0009416,GO:0009451,GO:0009605,GO:0009607,GO:0009628,GO:0009648,GO:0009649,GO:0009790,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010562,GO:0010563,GO:0010564,GO:0010570,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0010948,GO:0015630,GO:0016043,GO:0016050,GO:0016070,GO:0016192,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019747,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030029,GO:0030036,GO:0030447,GO:0030588,GO:0030590,GO:0030865,GO:0030866,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0031505,GO:0031667,GO:0031929,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032872,GO:0032873,GO:0032922,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033554,GO:0034248,GO:0034250,GO:0034470,GO:0034599,GO:0034641,GO:0034660,GO:0035556,GO:0036168,GO:0036170,GO:0036171,GO:0036176,GO:0036177,GO:0036178,GO:0036180,GO:0036211,GO:0036244,GO:0040001,GO:0040007,GO:0040008,GO:0042221,GO:0042325,GO:0042326,GO:0042578,GO:0042594,GO:0042752,GO:0042762,GO:0043085,GO:0043153,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043409,GO:0043412,GO:0043933,GO:0044085,GO:0044093,GO:0044182,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045229,GO:0045786,GO:0045828,GO:0045834,GO:0045839,GO:0045927,GO:0045930,GO:0045935,GO:0045936,GO:0045937,GO:0045981,GO:0046328,GO:0046329,GO:0046483,GO:0046889,GO:0046890,GO:0046907,GO:0047485,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048511,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048831,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051176,GO:0051179,GO:0051193,GO:0051194,GO:0051196,GO:0051197,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051293,GO:0051341,GO:0051353,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0061024,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070262,GO:0070302,GO:0070303,GO:0070887,GO:0071071,GO:0071073,GO:0071214,GO:0071467,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0071963,GO:0072357,GO:0080090,GO:0080134,GO:0080135,GO:0090033,GO:0090114,GO:0090304,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0104004,GO:0140096,GO:1900428,GO:1900430,GO:1900434,GO:1900436,GO:1900437,GO:1900439,GO:1900440,GO:1900442,GO:1900486,GO:1900490,GO:1900542,GO:1900544,GO:1900741,GO:1900743,GO:1901360,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1902850,GO:1903047,GO:1903293,GO:1903725,GO:1903727,GO:2000026,GO:2000241,GO:2000242,GO:2001210,GO:2001215,GO:2001251
Exons1
Evalue8.12e-22
EggNOG OGsCOG0639@1|root,KOG0373@2759|Eukaryota
Ec32 ortholog descriptionProtein phosphatase 2A catalytic subunit C
Ec32 orthologEc-23_000740.1
EC3.1.3.16
Descriptionphosphoprotein phosphatase activity
Cds size150
COG categoryT
BRITEko00000,ko00001,ko01000,ko01009,ko03016,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854112.6271532-CDS-H-canaliculatus_M_contigs7754:5052..52021696854112.6271532-CDS-H-canaliculatus_M_contigs7754:5052..5202Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7754 5053..5202 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7754.1.1prot_H-canaliculatus_M_contigs7754.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7754 5053..5202 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7754.1.1

>prot_H-canaliculatus_M_contigs7754.1.1 ID=prot_H-canaliculatus_M_contigs7754.1.1|Name=mRNA_H-canaliculatus_M_contigs7754.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=50bp
LASKKVKDILIEENNVQLVRSPVTICGDIHGQFYDLLQLLAMGGKVPDTS
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mRNA from alignment at H-canaliculatus_M_contigs7754:5053..5202+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7754.1.1 ID=mRNA_H-canaliculatus_M_contigs7754.1.1|Name=mRNA_H-canaliculatus_M_contigs7754.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=150bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7754:5053..5202+ (Hapterophycus canaliculatus Oshoro7m male)
CTCGCCTCAAAAAAGGTGAAGGATATTTTGATAGAGGAGAACAACGTCCA
GCTGGTGCGATCGCCGGTGACGATCTGCGGAGATATCCACGGGCAGTTTT
ATGACCTGCTGCAGCTGCTCGCGATGGGGGGGAAGGTTCCCGACACAAGC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7754:5053..5202+

>mRNA_H-canaliculatus_M_contigs7754.1.1 ID=mRNA_H-canaliculatus_M_contigs7754.1.1|Name=mRNA_H-canaliculatus_M_contigs7754.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=150bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7754:5053..5202+ (Hapterophycus canaliculatus Oshoro7m male)
CTCGCCTCAAAAAAGGTGAAGGATATTTTGATAGAGGAGAACAACGTCCA
GCTGGTGCGATCGCCGGTGACGATCTGCGGAGATATCCACGGGCAGTTTT
ATGACCTGCTGCAGCTGCTCGCGATGGGGGGGAAGGTTCCCGACACAAGC
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