mRNA_H-canaliculatus_M_contigs7746.1.2 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ94_9PHAE) HSP 1 Score: 434 bits (1117), Expect = 3.070e-149 Identity = 227/314 (72.29%), Postives = 244/314 (77.71%), Query Frame = 1
Query: 1 MRQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGV---GNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAM-KPHEEGPERQPQQSSQRGAQ-------------EGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPPPPAGFVPSSS 891
MRQEIEVMRH+YHRSVVLLFEVLEE+DEWE DG EGRVCMV+EYMEGG TMTFDDESGLFKRP G G A G+ YSEDEAKPLFRDLLQGLLYLHGKNIVHRD+KPDNLLIFENGTLRICDFGCAR+VK RQPS DA S+AM + HEE EG LT SVGTYTFHSPE + GDG+ YSG+AADAWAAACTLYCW FGCLPFHD SLERVFEKIKEQ++DVG+AVSPEL SLL+GMLCKDP R+GLQAALEHPWMRGVPDPPPPAGF+P SS
Sbjct: 136 MRQEIEVMRHLYHRSVVLLFEVLEEQDEWE-----DGQEGRVCMVEEYMEGGPTMTFDDESGLFKRPDGGGSGTKAXXXXXXXGSFYSEDEAKPLFRDLLQGLLYLHGKNIVHRDVKPDNLLIFENGTLRICDFGCARYVKIVRRQPSKSKDATGSEAMGRCHEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXEG-LTGSVGTYTFHSPESVMGDGKTYSGRAADAWAAACTLYCWTFGCLPFHDPSLERVFEKIKEQQVDVGKAVSPELTSLLRGMLCKDPLQRIGLQAALEHPWMRGVPDPPPPAGFIPKSS 443
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH8_ECTSI) HSP 1 Score: 430 bits (1105), Expect = 3.360e-147 Identity = 224/316 (70.89%), Postives = 242/316 (76.58%), Query Frame = 1
Query: 1 MRQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVG----GCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQ---------------EGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPPPPAGFVPSSS 891
MRQEIEVMRH+YHRSVVLLFEVLEE+D WE DG EGRVCMVQEYMEGG TMTFDDESGLFKRP G G + YSEDEAKPLFRDLLQGLLYLHGKNIVHRD+KPDNLLIFENGTLRICDFGCAR+VK RQPS DA S+AM + ++QP EG LT SVGTYTFHSPE + GDG+ YSG+AADAWAAACTLYCW FGCLPFHD SLERVFEKIK QE+DVG+AVSP+LASLL+GMLCKDP R+GLQAALEHPWMRGVPDPPPPAGF+P SS
Sbjct: 149 MRQEIEVMRHLYHRSVVLLFEVLEEQDGWE-----DGQEGRVCMVQEYMEGGPTMTFDDESGLFKRPDGGGSGTXXXXXXXXXXXSFYSEDEAKPLFRDLLQGLLYLHGKNIVHRDVKPDNLLIFENGTLRICDFGCARYVKIVRRQPSKSKDANGSEAMGRCQGEDQQQPXXXXXXXXXXXXXXXXXXXXXXXXEG-LTGSVGTYTFHSPESVMGDGKTYSGRAADAWAAACTLYCWTFGCLPFHDPSLERVFEKIKGQEVDVGKAVSPDLASLLRGMLCKDPLQRIGLQAALEHPWMRGVPDPPPPAGFIPKSS 458
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Kinase-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED4_9STRA) HSP 1 Score: 215 bits (547), Expect = 6.490e-64 Identity = 125/286 (43.71%), Postives = 163/286 (56.99%), Query Frame = 1
Query: 4 RQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPP 861
R+EI++MRH+YHR+VVLLFEVLE D + DDD H +CMV E ME G TM + G F +G AGV + E A+ +F DL++G+ YLHG+ I HRDIKPDNL+I+ENGTLRI DFGCA + P A DA L D+ G YTF +PE I PY G AD W+A TLY WIFG +PF+ S E ++E I+ +++G+A+S +L LL +L KDPR R+ LQ L H W++ VP+PP
Sbjct: 126 RREIDIMRHLYHRNVVLLFEVLESADTY----DDDSH---ICMVLELMERGPTMVCGAD-GTFVAERGE-----AGV-----WPEAAAQLMFADLVRGMQYLHGRGICHRDIKPDNLMIYENGTLRITDFGCAVYFPPGP----------ARDAAL----------------------LRDTAGAYTFLAPECINLKADPYCGYGADIWSAGVTLYTWIFGEVPFYSDSPEPLYEAIRNDPVELGEALSADLLDLLARLLDKDPRSRITLQQCLSHAWLKDVPEPP 361
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZPN3_PHYSP) HSP 1 Score: 150 bits (378), Expect = 6.060e-39 Identity = 97/285 (34.04%), Postives = 135/285 (47.37%), Query Frame = 1
Query: 10 EIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTF-DDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDV--------GQAVSPELASLLQGMLCKDPRGRVGLQAALEHPW 837
EIE+MR +YHR++VLLFEV+E D ++ MV EYM G M + D + R G T+ E+ A+ D+L GL YLH + I HRDIKPDN+L+ + G + DFGCA+ G + S+AM+ LTD+VGTY F +PE +G+ PY D WA + ++FG LPF +S +F++I E+ + Q VSPE LL +L KDP R+ + A HPW
Sbjct: 142 EIEIMRSLYHRNIVLLFEVIEADDS-----------DKLYMVLEYMARGPCMVYRPDAKDFYSRVTGGTL------------PEELARSYLSDILLGLQYLHQRQICHRDIKPDNVLLNDTGRCHLTDFGCAKAFAAYGH--------DGSEAMR----------------------LTDTVGTYQFLAPECCSGE--PYDPFKVDIWAVGVVYFIFLFGRLPFTSESARELFDEITRAEVVLPGPDESRRDQPVSPEARDLLHRLLEKDPAQRITIDEAFRHPW 371
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Predicted (protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SLT3_PHYPA) HSP 1 Score: 145 bits (366), Expect = 3.520e-38 Identity = 91/279 (32.62%), Postives = 130/279 (46.59%), Query Frame = 1
Query: 7 QEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVG-VGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWM 840
+E+ +M+ + H ++V L EV+ DD MV EY+EGG F+ GC G +G+A A+ FRD++ GL+YLH NI+H DIKP+NLL+ +G ++ICDFG +R + + L S GT + +PE G Y GKAAD WA CTLYC + G PF +L+ ++KI L + V P+LA LL+G+LCKD R+ L+A H W+
Sbjct: 67 REVMIMKQLDHPNIVKLIEVI-----------DDPQSDNYYMVLEYVEGG--WIFE---------------GCGPAGGIGDA----RARQYFRDVVAGLIYLHKNNIIHGDIKPENLLVSSDGHIKICDFGVSRKFEDGNDE------------------------------------LRRSPGTPVYTAPECCL--GLTYHGKAADVWALGCTLYCMVLGSYPFKGDNLQSTYDKIVNDPLHISGHVEPDLADLLRGLLCKDATKRLSLEAVANHSWV 275
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Hypothetical (protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LB82_SPIIN) HSP 1 Score: 147 bits (372), Expect = 5.650e-38 Identity = 90/278 (32.37%), Postives = 130/278 (46.76%), Query Frame = 1
Query: 7 QEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWM 840
+E+ +M+ + H ++V L EV+ DD + MV EY+EG C G G + ED ++ RD++ GL+YLH NI+H DIKPDNLL+ +G ++I DF ++ + + L S GT F +PE G YSG+AAD WA TLYC +FG PF +SL+ ++KI L + + VSP L L++G+LCKDPR R+ L+A EHPW+
Sbjct: 168 REVSIMKILDHPNIVKLVEVI-----------DDPNSDHFYMVLEYIEGKWV--------------------CEGSGPASGIGEDASRTYLRDIIAGLMYLHSNNIIHGDIKPDNLLVTSSGRVKIGDFSVSQVFEDDNDE------------------------------------LRRSPGTPVFTAPECC--QGLTYSGRAADTWAVGVTLYCMLFGQYPFLGESLQDTYDKIVNDPLMIPEGVSPLLKDLVEGLLCKDPRRRLTLKAVSEHPWV 376
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5CRV6_AMBTC) HSP 1 Score: 147 bits (372), Expect = 6.720e-38 Identity = 92/278 (33.09%), Postives = 129/278 (46.40%), Query Frame = 1
Query: 7 QEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWM 840
+E+ +M+ + H ++V L EV+++ PD D MV EY+EG C G G E ++ FRD++ GL+YLH NIVH DIKP+NLL+ NG ++ICDF +R + + L S GT F +PE G Y GKAAD WA TLYC FGC PF +L+ +++I L + + + PEL LL+G+LCKDP+ R L A +EHPW+
Sbjct: 155 REVLIMKMLGHPNIVNLIEVIDD-------PDTD----YFYMVLEYVEGKWI--------------------CEGSGPPGGIGETTSRRYFRDVVAGLMYLHAHNIVHGDIKPENLLVTSNGRVKICDFSVSRIFEDDNDE------------------------------------LRRSPGTPVFTAPECCL--GLTYHGKAADVWALGVTLYCMTFGCYPFLGDTLQDTYDRIVNNPLHLPEDMDPELKDLLEGLLCKDPKQRFTLDAIVEHPWV 363
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IP02_PHYPA) HSP 1 Score: 145 bits (366), Expect = 4.460e-37 Identity = 91/279 (32.62%), Postives = 130/279 (46.59%), Query Frame = 1
Query: 7 QEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVG-VGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWM 840
+E+ +M+ + H ++V L EV+ DD MV EY+EGG F+ GC G +G+A A+ FRD++ GL+YLH NI+H DIKP+NLL+ +G ++ICDFG +R + + L S GT + +PE G Y GKAAD WA CTLYC + G PF +L+ ++KI L + V P+LA LL+G+LCKD R+ L+A H W+
Sbjct: 182 REVMIMKQLDHPNIVKLIEVI-----------DDPQSDNYYMVLEYVEGG--WIFE---------------GCGPAGGIGDA----RARQYFRDVVAGLIYLHKNNIIHGDIKPENLLVSSDGHIKICDFGVSRKFEDGNDE------------------------------------LRRSPGTPVYTAPECCL--GLTYHGKAADVWALGCTLYCMVLGSYPFKGDNLQSTYDKIVNDPLHISGHVEPDLADLLRGLLCKDATKRLSLEAVANHSWV 390
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LDE2_CHEQI) HSP 1 Score: 141 bits (356), Expect = 4.660e-37 Identity = 92/288 (31.94%), Postives = 132/288 (45.83%), Query Frame = 1
Query: 1 MRQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPPP 864
++Q + +M+ + H ++V L EV+ + PD D MV EY+EG +D C G G E A+ RD++ GL+YLH NIVH DIKP NLL+ NGT++I DF ++ + + L S GT +PE G Y GKAAD WA TLYC I G PF ++L+ ++KI +D+ + ++P+L +LL+G+LCKDP R+ L EHPW+ G P P
Sbjct: 9 LQQFVLIMKIVSHPNIVNLIEVIND-------PDTD----HFYMVLEYVEG----KWD----------------CEGAGPPGGLGEAIARKYLRDIVSGLMYLHSHNIVHMDIKPQNLLVSRNGTVKIADFSVSQVFEEDNDE------------------------------------LRRSPGTPVITAPECCL--GLTYRGKAADTWAVGITLYCMIMGKFPFIGETLQDTYDKIVNDPIDLPENINPQLRNLLEGLLCKDPDQRLTLNMVAEHPWVIGEEGPLP 227
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SXF8_9STRA) HSP 1 Score: 145 bits (366), Expect = 4.810e-37 Identity = 101/297 (34.01%), Postives = 143/297 (48.15%), Query Frame = 1
Query: 10 EIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQEL------DVGQ--AVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPPPPAGF 876
EIE+MR +YHR++VLLFEV+E D ++ MV EYM G M + RP GV SE+ A+ D+L GL YLH + + HRDIKPDN+L+ ++G I DFGCA+ V + D + A +P L+D+VGTY F SPE +G+ PY D WA + ++FG LPF +S +F++I E+ + G+ ++SPE +LL+ +L KDP R+ + AL HPW D P F
Sbjct: 155 EIEIMRSLYHRNIVLLFEVIEASDS-----------DKLYMVLEYMACGPCMIY--------RPDTKDFYSRVTEGV---LSEELARSYLSDILLGLQYLHQRQVCHRDIKPDNILLNDSGRCHITDFGCAKAVN------NISDDVSDNSAAEPV-------------------FLSDTVGTYQFLSPECCSGE--PYDPFKVDIWAVGVVFFIFLFGRLPFTSESTRELFDEIIRAEIVLPGTEESGRELSLSPEGQNLLRRLLEKDPEQRITIVEALSHPWFTQDEDDEEPLSF 402 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7746.1.2 >prot_H-canaliculatus_M_contigs7746.1.2 ID=prot_H-canaliculatus_M_contigs7746.1.2|Name=mRNA_H-canaliculatus_M_contigs7746.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=298bp MRQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEback to top mRNA from alignment at H-canaliculatus_M_contigs7746:57..1637+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7746.1.2 ID=mRNA_H-canaliculatus_M_contigs7746.1.2|Name=mRNA_H-canaliculatus_M_contigs7746.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1581bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7746:57..1637+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7746:57..1637+ >mRNA_H-canaliculatus_M_contigs7746.1.2 ID=mRNA_H-canaliculatus_M_contigs7746.1.2|Name=mRNA_H-canaliculatus_M_contigs7746.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=894bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7746:57..1637+ (Hapterophycus canaliculatus Oshoro7m male)back to top |