mRNA_H-canaliculatus_M_contigs77441.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: Cupin ((Fragment) n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A3B9BWS9_9RHOB) HSP 1 Score: 254 bits (650), Expect = 5.450e-83 Identity = 119/164 (72.56%), Postives = 135/164 (82.32%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVARFNGNTPSPCTHNSDILFTYVLEGSMTLTGE 492
VPD VHYHTIGFQLI+CYRGWVRLVYEDQG FIL+AGDCVIQPPEIRHRVLE+SDN+EVVEIGVP+DHETTIDH MELP P+R FSGQ F ++ +ASWQP+RI GF +R+TGI T G+ANV VARF G P P H+SDILFT++LEG MTLTGE
Sbjct: 62 VPDMVHYHTIGFQLIYCYRGWVRLVYEDQGPEFILNAGDCVIQPPEIRHRVLEASDNVEVVEIGVPADHETTIDHDMELPNDILNPNRKFSGQMFVRHQLKDASWQPWRIAGFEHRDTGIFNGTQGVANVQVARFKGGRPKPTRHSSDILFTFILEGRMTLTGE 225
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: Cupin (n=1 Tax=Chromatiales bacterium (ex Bugula neritina AB1) TaxID=1868282 RepID=A0A1E4ZSA8_9GAMM) HSP 1 Score: 249 bits (635), Expect = 2.600e-79 Identity = 115/170 (67.65%), Postives = 141/170 (82.94%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVARFNG--NTPSPCTHNSDILFTYVLEGSMTLTGEDNQA 504
VPD VHYHT+GFQLI+CYRGWVRLVYEDQG FIL+AGDCVIQPPEIRHRVLESSDNLEV+EIGVP++H TTIDH+MELPT+ + P R+F GQRFCH ++ A WQ R++GF R+TGI +ATGG+ANV V + G NT + C+H+SDILF++++EGS+TL ED A
Sbjct: 161 VPDMVHYHTVGFQLIYCYRGWVRLVYEDQGPAFILNAGDCVIQPPEIRHRVLESSDNLEVIEIGVPAEHITTIDHNMELPTAEFNPSRIFGGQRFCHHQLENARWQAARLDGFEVRDTGILDATGGVANVQVYKATGAQNTAAICSHDSDILFSFLMEGSVTLEAEDEPA 330
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: cupin (domain-containing protein n=1 Tax=Winogradskyella sp. E313 TaxID=2816852 RepID=UPI001D0CA9ED) HSP 1 Score: 245 bits (625), Expect = 5.590e-78 Identity = 118/171 (69.01%), Postives = 137/171 (80.12%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVAR-FNGNTPSPCT-HNSDILFTYVLEGSMTLTGEDNQAH 507
VPD VHYHTIGFQLIFCY+GWV+LVYEDQGEPFIL+AGDCV QPPEIRHRVLE+SDNLEV+EIGVPSDH TTIDH MELP Y P+R F GQRFCH K AEA W+P+RI+GF +R+TGINEAT A+V V R N T H++DILFT+V+EG+M L E+ + H
Sbjct: 152 VPDVVHYHTIGFQLIFCYKGWVKLVYEDQGEPFILNAGDCVTQPPEIRHRVLEASDNLEVIEIGVPSDHMTTIDHDMELPNGIYNPNREFQGQRFCHHKAAEAIWKPWRISGFEHRDTGINEATKQKASVNVIRVLNSAIEQRYTNHDTDILFTFVMEGNMQLVAENYETH 322
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: Cupin (n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2A4QHS8_9BACT) HSP 1 Score: 236 bits (601), Expect = 1.240e-74 Identity = 110/169 (65.09%), Postives = 132/169 (78.11%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVARFNGNTPSP--CTHNSDILFTYVLEGSMTLTGEDNQ 501
VPD VHYHTIGFQLIFCYRGWV+LVYEDQG FIL+AGDCV QPP+IRHRVLE+SDNLEV+EIGVP+DH TTIDH M LPTS Y PDR F GQ+FCH +V EA W +++ GF +R+TGI AT G+ +V VAR NT TH++DILFT+++EG M L +D +
Sbjct: 130 VPDMVHYHTIGFQLIFCYRGWVKLVYEDQGPAFILNAGDCVTQPPQIRHRVLEASDNLEVIEIGVPADHMTTIDHDMNLPTSEYLPDREFQGQKFCHHQVDEAQWNLWKMQGFEFRDTGIEIATAGMVSVHVARVLENTKKTQTITHDADILFTFIMEGEMMLGADDRE 298
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: Mannose-6-phosphate (isomerase, cupin superfamily n=11 Tax=Pseudovibrio TaxID=258255 RepID=A0A1H0Z1F2_9HYPH) HSP 1 Score: 236 bits (603), Expect = 1.610e-74 Identity = 111/171 (64.91%), Postives = 135/171 (78.95%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVARFN-GNTPSPCTHNSDILFTYVLEGSMTLTGEDNQAHE 510
VPD VHYHT+GFQLIFCY GWVRLVYEDQGEPFIL AGDCVIQPPEIRHRVLESS LEV+EIGVP++H T+IDH M+LP ++ P+R F GQ+F ++ A+WQPFR+ GF R+TGI AT +ANV VAR G T + +H SDILF++V+EGS+TL E+ +AHE
Sbjct: 160 VPDMVHYHTVGFQLIFCYHGWVRLVYEDQGEPFILKAGDCVIQPPEIRHRVLESSGELEVIEIGVPAEHVTSIDHEMDLPNTSVNPEREFQGQKFVRHQLDSATWQPFRLEGFECRDTGIGTATKQVANVQVARVTTGPTGAVTSHTSDILFSFVMEGSVTLVNEEGKAHE 330
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: Cupin (domain-containing protein n=1 Tax=Flavobacteriaceae bacterium PRS1 TaxID=2483459 RepID=A0A3M7KL28_9FLAO) HSP 1 Score: 235 bits (600), Expect = 3.530e-74 Identity = 112/166 (67.47%), Postives = 131/166 (78.92%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVAR-FNGNT-PSPCTHNSDILFTYVLEGSMTLTGE 492
VPD VHYHTIGFQLIFCY GWV+LVYEDQG PFIL AGDCV QPPEIRHRVLE+SDNLEV+EIGVP+ H TTIDH MELPT Y P+R F GQ FCH KV EA W+P+RI GF +R+TGIN AT +A+V +AR N N P +H++DILFT+V++G M L +
Sbjct: 154 VPDMVHYHTIGFQLIFCYSGWVKLVYEDQGPPFILEAGDCVTQPPEIRHRVLEASDNLEVIEIGVPAAHLTTIDHDMELPTKEYHPEREFQGQVFCHHKVKEAVWKPWRIKGFEFRDTGINTATKAVASVQIARPLNTNAKPQLISHDTDILFTFVMQGEMELAAD 319
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: Quercetin (dioxygenase-like cupin family protein n=5 Tax=Sulfitobacter geojensis TaxID=1342299 RepID=A0A7Z0CEU0_9RHOB) HSP 1 Score: 235 bits (599), Expect = 6.300e-74 Identity = 110/165 (66.67%), Postives = 136/165 (82.42%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVARFNGNTPSP-CTHNSDILFTYVLEGSMTLTGE 492
VPD VHYHT+GFQLIFCYRGWVRLVYEDQG+PFIL+AGDCVIQPP+IRHRVLE+SDN+EV+E+GVP++H TTIDH MELP T PDR +SG +F H K AEA W P+RI G++ R+TGI TGG+A V VAR +G+ +P +H++DILFT+V EG++TL E
Sbjct: 160 VPDMVHYHTVGFQLIFCYRGWVRLVYEDQGDPFILNAGDCVIQPPQIRHRVLEASDNVEVLELGVPAEHVTTIDHEMELPNGTINPDRDWSGSKFVHHKEAEAVWAPWRIPGWDARDTGIGAGTGGVAGVTVARPDGSGTTPWSSHDTDILFTFVKEGTLTLEVE 324
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: Cupin (domain-containing protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) TaxID=760192 RepID=F4L659_HALH1) HSP 1 Score: 234 bits (597), Expect = 8.930e-74 Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVAR--FNGNTPSPCTHNSDILFTYVLEGSMTL 483
VPD VHYHTIGFQLIFCYRGWV+LVYEDQG PFIL AGDCV QPPEIRH+VLE+SDNLEV+EIGVP+ H TTIDH MELPT + PDR F GQ FCH ++ EASW P+RI GF +R+TGIN AT G+A+V V R TP +HN+DILF++VL+G++ L
Sbjct: 155 VPDMVHYHTIGFQLIFCYRGWVKLVYEDQGPPFILHAGDCVTQPPEIRHQVLEASDNLEVIEIGVPAMHMTTIDHEMELPTPQFLPDRKFQGQTFCHHRLVEASWSPWRIKGFEHRDTGINVATKGVASVHVVRPVQFPETPQWSSHNTDILFSFVLKGTLDL 317
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: Cupin (domain protein n=2 Tax=Boseongicola TaxID=1648497 RepID=A0A238J0Z5_9RHOB) HSP 1 Score: 233 bits (593), Expect = 3.590e-73 Identity = 108/167 (64.67%), Postives = 127/167 (76.05%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVARFNGNTPSPCTHNSDILFTYVLEGSMTLTGEDNQ 501
VPD VHYHT+GFQLIFCYRGWV LVYEDQGEPF L AG+CVIQPPEIRHRVL +SDN+EV+EIGVP++H TTIDH MELP + P+R+F GQRF H K A W+PFR+ GF R+T I+ TGG+A V V R G P H DILFT+V+EG+MTL GE +
Sbjct: 152 VPDMVHYHTVGFQLIFCYRGWVDLVYEDQGEPFRLFAGNCVIQPPEIRHRVLFASDNIEVIEIGVPAEHVTTIDHEMELPNAEVNPERLFQGQRFVHHKAEGAEWRPFRLKGFQSRDTTIDANTGGVAGVHVVRRGGGDPEWTRHEGDILFTFVMEGAMTLEGEGKE 318
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Match: Cupin (n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2A4PAK4_9HYPH) HSP 1 Score: 233 bits (594), Expect = 3.680e-73 Identity = 114/174 (65.52%), Postives = 135/174 (77.59%), Query Frame = 1
Query: 1 VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRVLESSDNLEVVEIGVPSDHETTIDHSMELPTSTYKPDRMFSGQRFCHSKVAEASWQPFRINGFNYRETGINEATGGLANVVVARF----NGNTPSPCTHNSDILFTYVLEGSMTLTGEDNQAHE 510
VPD VHYHT+GFQLIFCYRGWVRLVYEDQGEPFIL+AGDCVIQPP IRHRVLESS NLEV+EIGVP+DH TTIDH MELPT+ P+R F GQRF ++ +A+W R+ GF R+TGI AT G+ANV VAR NG S H+SDILF++V+EG +TL ED ++H+
Sbjct: 160 VPDMVHYHTVGFQLIFCYRGWVRLVYEDQGEPFILNAGDCVIQPPXIRHRVLESSGNLEVIEIGVPADHVTTIDHVMELPTNMLDPERDFDGQRFIRHELKDAAWIEHRLKGFECRDTGIGGATDGVANVQVARVKSAPNGEVTS---HSSDILFSFVMEGCVTLACEDGKSHQ 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77441.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs77441.1.1 >prot_H-canaliculatus_M_contigs77441.1.1 ID=prot_H-canaliculatus_M_contigs77441.1.1|Name=mRNA_H-canaliculatus_M_contigs77441.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=170bp VPDRVHYHTIGFQLIFCYRGWVRLVYEDQGEPFILSAGDCVIQPPEIRHRback to top mRNA from alignment at H-canaliculatus_M_contigs77441:2..511- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs77441.1.1 ID=mRNA_H-canaliculatus_M_contigs77441.1.1|Name=mRNA_H-canaliculatus_M_contigs77441.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=510bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77441:2..511- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77441:2..511- >mRNA_H-canaliculatus_M_contigs77441.1.1 ID=mRNA_H-canaliculatus_M_contigs77441.1.1|Name=mRNA_H-canaliculatus_M_contigs77441.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=510bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77441:2..511- (Hapterophycus canaliculatus Oshoro7m male)back to top |