mRNA_H-canaliculatus_M_contigs771.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY1_ECTSI) HSP 1 Score: 382 bits (980), Expect = 5.930e-131 Identity = 194/257 (75.49%), Postives = 226/257 (87.94%), Query Frame = 1
Query: 19 LSASLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSVA 789
L+AS AI+ S ASSRLDVIDLP GF+PEGITNGEGWTA+VGSL GNIWKGDLETG+G+V EL APGPAVGLD+DRRS YLFVAGGPVGTARVYDE F LVADLAL++ G+S+FVNDVIITKTAAFFTDSFQ K+YKV+LDR +GALV G VHT++LS+NVPV+EGAFN NG+EA DDGS L++VN SQQL+ +DPDTG A L+DLGGELLPG GDGLVLRKNTLW+VDN++EQ++EVSL+ADL+CGS+A
Sbjct: 8 LAASWAIIAS---EASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSDYLFVAGGPVGTARVYDEDFALVADLALSD-GNSSFVNDVIITKTAAFFTDSFQPKIYKVNLDRETGALVDGLA-VHTLVLSDNVPVLEGAFNVNGIEATDDGSALVIVNMESQQLFAVDPDTGAATLIDLGGELLPGR-GDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLA 258
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ69_ECTSI) HSP 1 Score: 327 bits (839), Expect = 3.290e-109 Identity = 173/263 (65.78%), Postives = 204/263 (77.57%), Query Frame = 1
Query: 1 MKLSGFLSASLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSVA 789
M++SG L A+L + SASSRLDVIDLP GF PEGIT+G GWTA+VGSL GNIWKGDL+TGEG+VMEL APGPA GL +DRRSGYLFVAG GT RVYDE F LVADL + G S +NDV++TK AAF+TDSFQ +YKV+LDR +GALV G T++L +N P VE A N NG+E DDGS LIVVNS SQQ+Y +DPDTG A ++DLGG++L G GDGLVLRKNTLW+ DN +EQ+ EVSLSADL+CGSVA
Sbjct: 23 MRVSGGLLATLVTV----TSASSRLDVIDLPTGFSPEGITSGGGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVGTS-IINDVVVTKGAAFYTDSFQPHIYKVNLDRETGALVDGSS-FETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVL-GPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVA 278
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZGA0_9CHLR) HSP 1 Score: 213 bits (541), Expect = 1.470e-64 Identity = 127/260 (48.85%), Postives = 164/260 (63.08%), Query Frame = 1
Query: 13 GFLSASLAILGSAFVSASSRL-DVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPG-PAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
G + +L L A +A+ R +VI LPNGF PEGI GEG TAY GSL G+I+ DL TG G+++ L PG PAVGLD+DRR+GYLFV+GGP G R+Y+ H G DL + + FVNDVI+T AA+FTDSF +YKVDLD G G T+ LS + V G FNTNG+ A +G+ LI+V+S +LY +DP TG A L+DLGGE + GDGLVL L++V NS+ Q+ E LS + T S+
Sbjct: 10 GLILLTLLTLAVASPAAAQRYPEVIPLPNGFQPEGIVVGEGNTAYAGSLADGDIYTVDLSTGAGEIL-LEGPGTPAVGLDFDRRTGYLFVSGGPNGDGRIYNTHTG---DLVTSYDFAGGFVNDVIVTPHAAYFTDSFMPVLYKVDLDDS-----GTPGADSTLSLSGDFVFVPGGFNTNGIVATPNGNALIIVHSSRGELYKVDPQTGEATLIDLGGENVNS--GDGLVLVARKLFVVQNSLNQIAEFHLSRNYTAASL 258
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A643JWK0_9EURY) HSP 1 Score: 197 bits (502), Expect = 1.560e-58 Identity = 121/256 (47.27%), Postives = 156/256 (60.94%), Query Frame = 1
Query: 25 ASLAILGSAFVSASSRLD-VIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFG-LVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
A LA++G+ +A S VI LP GF PEGI G G +VGSL G I++GDL TG G V GPAVGL +D RS YLFVAGGP G A VYD G LVAD L DS FVNDV++T+TAA+FTDS + +Y++ L +G V + V I LS + V G FN NG++A +G LIVVN+ + LY +DP +G A +DLGGE + GDG++L TL++V N + Q+ V+L D T G V
Sbjct: 25 AGLAVVGTGTAAAKSAFPAVIPLPIGFQPEGIVTGLGTDFFVGSLAGGAIYRGDLRTGSGDVFVPPTGGPAVGLSHDARSNYLFVAGGPTGRASVYDADTGALVADYELQ---DSQFVNDVVVTRTAAYFTDSARPSLYRIPLG--AGGDVPNQSAVEEIPLSGDFTSVAG-FNANGIDAPPNGKYLIVVNTSTGLLYKVDPASGDATEIDLGGETVTA--GDGILLAGRTLYVVRNQLNQIAVVTLDPDATAGEV 272
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5S5I5_9CHLR) HSP 1 Score: 195 bits (496), Expect = 1.170e-57 Identity = 113/245 (46.12%), Postives = 154/245 (62.86%), Query Frame = 1
Query: 76 DVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPG-PAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGL-VADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPV------VEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
+VI LPNGF PEGI +G G T YVGS+ TG +++GD+ +GEG+V+ + G A+GL YD RSG LFV+GG G A VYD G VA++ L+ +F+NDV+ITK AA+FT+SFQ Y+V L RH GG+ SE VP+ + AFN+NG+ A +G LI+VNS LY +DP TG A +DLGG +P GDGL+L+ TL++V N + Q+ + L +D T GS+
Sbjct: 36 EVIPLPNGFQPEGIASGRGNTFYVGSIPTGAVYRGDVRSGEGEVLVPAQEGRSAIGLKYDSRSGLLFVSGGNTGFAYVYDGKTGANVAEIQLSTT--PSFINDVVITKDAAYFTNSFQPVFYRVSLARH--------GGLPPAPTSEEVPLGGDFQFIPDAFNSNGIAATPNGKALIIVNSSEGALYKVDPATGDAKRIDLGGGSVPN--GDGLLLQGKTLYVVQNQLNQIAVIRLKSDFTSGSI 268
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=3 Tax=Haloferacaceae TaxID=1644056 RepID=A0A6A8G917_9EURY) HSP 1 Score: 195 bits (495), Expect = 1.180e-57 Identity = 122/255 (47.84%), Postives = 156/255 (61.18%), Query Frame = 1
Query: 31 LAILGSAFVSASSRL-DVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGP-AVGLDYDRRSGYLFVAGGPVGTARVYDEHFG-LVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
LA++GS SA++ VI LP GF PEGI G G +VGSL G I++GDL TG G+V G AVGL +D RS YLFVAGGP G A VYD + G LVAD L +G TFVNDV++T+TAA+FTDSF+ +Y+V L +G V + V I LS + V G FN NG++A +G LIVVNS + LY +DP TG A +DLGG L GDG++L TL++V N + + V L + T G V
Sbjct: 10 LAVVGSGSASAAAAYPSVIPLPTGFRPEGIVTGLGNEFFVGSLAAGAIYRGDLRTGSGEVFVPPVEGGVAVGLSHDARSNYLFVAGGPTGQASVYDANTGALVADYGL--QGPPTFVNDVVVTRTAAYFTDSFRPALYRVPLG--AGGDVPDQSAVEEIPLSGDFTSV-GGFNANGIDAPPNGEYLIVVNSSTGLLYKVDPATGDATEIDLGGASLTA--GDGILLEGRTLYVVRNQLNLIAVVQLDPEATAGEV 257
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G508_ECTSI) HSP 1 Score: 194 bits (494), Expect = 3.450e-57 Identity = 123/270 (45.56%), Postives = 166/270 (61.48%), Query Frame = 1
Query: 34 AILGSAFVSA--SSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGP-AVGLDYDRRSGYLFVAGGPVGTARVYD--EHFGLVADLALAEEGDSTFVNDVIITKTA--AFFTDSFQRKMYKVDLDRHSGALVGGEGGV-HTIMLSENVP------VVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSI-----EQVIEVSLSADLTCGSV 786
++L A V A + RLD+IDLP GF PEG+T G G YV + G+IWKGDLETG G V+ G A+G+D+DRRS YL+V G G+ +YD + F LVA++ L G S VNDVII + A+ T+S Q + Y++ LD + G L G V I LS + + + A N+NG+ DD S LI+VN S +L+ +DPDTG A L+DLGG+L+ GGDGLVLRKNTLW+ N + + V+EV LS DL+CG++
Sbjct: 6 SLLSLAIVPAVLAGRLDLIDLPVGFQPEGVTLGHGQEVYVSAFTGGSIWKGDLETGVGSVVIEGGNGTTALGIDFDRRSDYLWVCGAFSGSLAIYDTTDDFSLVAEIQLGTVGAS-LVNDVIIHPRSEYAYITESSQLQFYRIALDEY-GRLPNGPNTVAEVIPLSSDFSFQPGEIIADQALNSNGIVITDDLSSLIIVNYQSGELFAVDPDTGKATLIDLGGDLI--LGGDGLVLRKNTLWVCQNRLFGTPDQGVVEVLLSEDLSCGTI 271
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UU31_9CHLR) HSP 1 Score: 189 bits (480), Expect = 2.220e-55 Identity = 112/261 (42.91%), Postives = 163/261 (62.45%), Query Frame = 1
Query: 28 SLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPG-PAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGL-VADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPV------VEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
SL ++G+A S + +VI LPNGF PEGI +G+G T YVGS+ TG +++GDL +GEG+V+ + G A+GL YD RSG LFV+GG G A YD G VA++ L+ +F+NDV+ITK AA+FT+SFQ +++V L + +GG+ SE +P+ GAFN NG+ A +G LI+VNS LY +DP TG A +DLGG +P GDGL+L+ TL++V N + ++ + L +D + G++
Sbjct: 21 SLTMIGAA-PSHQTFPEVIPLPNGFQPEGIASGKGTTFYVGSIPTGAVFRGDLRSGEGEVLVPAQAGRSAIGLKYDERSGLLFVSGGNTGYAYFYDGKTGANVAEIQLSTL--PSFINDVVITKEAAYFTNSFQPVLHRVPLAK--------KGGLPPAPTSEEIPLGGDYQFTPGAFNANGIAATPNGKTLIIVNSTEGALYKVDPGTGNATRIDLGGGSVPN--GDGLLLQGKTLYVVQNQLNRIAVIRLKSDFSAGTI 268
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM39_9PHAE) HSP 1 Score: 185 bits (470), Expect = 2.670e-55 Identity = 103/176 (58.52%), Postives = 119/176 (67.61%), Query Frame = 1
Query: 163 GNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYK------------------------------------------VDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVD 564
GNIWKGDLETG+G+V EL APGPAVGLD+DRRSGYLFVAGGPVGTARVYDE F LVADL L++ G+S+FVNDVIITKTAA+FTDSFQ K+YK V+LDR +GALV G VHT++LS+NVPV+EGAFN NG+E D
Sbjct: 7 GNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADLVLSD-GNSSFVNDVIITKTAAYFTDSFQPKIYKARQLRPSLNEFRPREWGHSMSSRQHPVLQFEQVSTVSIEEKNVNLDRETGALVDGLA-VHTLVLSDNVPVLEGAFNVNGIEVSD 180
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L833_9PHAE) HSP 1 Score: 187 bits (475), Expect = 3.430e-55 Identity = 128/265 (48.30%), Postives = 157/265 (59.25%), Query Frame = 1
Query: 1 MKLSGFLSASLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQV--IEVSLSADLTCGSVA 789
M++SG L A+L + S SSRLD FY +A V + + GN WK DL+TGEG VMEL APGPA GL +DRRSGYLFVAG GT RVYDE F LVADLA + G S +NDV++TKTAAF+TDS + KV D+ S LIVVNS SQQ+Y +DPDTG A +VDLGG++L G GDGLVLRK+TL + DN +E++ ++VSLSADL+CGSVA
Sbjct: 1 MRVSGGLLATLVTVAST----SSRLDP------FYN---------SASVRAPE-GNNWKDDLKTGEGGVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLAFGDVGTS-MINDVVVTKTAAFYTDSIHPHINKV---------------------------------------TDNDSPLIVVNSESQQVYAVDPDTGDATVVDLGGDVL-GPRGDGLVLRKDTL-VSDNVLEKIYEVQVSLSADLSCGSVA 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs771.1.1 >prot_H-canaliculatus_M_contigs771.1.1 ID=prot_H-canaliculatus_M_contigs771.1.1|Name=mRNA_H-canaliculatus_M_contigs771.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=263bp MKLSGFLSASLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVGback to top mRNA from alignment at H-canaliculatus_M_contigs771:3..5463- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs771.1.1 ID=mRNA_H-canaliculatus_M_contigs771.1.1|Name=mRNA_H-canaliculatus_M_contigs771.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=5461bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs771:3..5463- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs771:3..5463- >mRNA_H-canaliculatus_M_contigs771.1.1 ID=mRNA_H-canaliculatus_M_contigs771.1.1|Name=mRNA_H-canaliculatus_M_contigs771.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=789bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs771:3..5463- (Hapterophycus canaliculatus Oshoro7m male)back to top |