mRNA_H-canaliculatus_M_contigs77022.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs77022.1.1
Unique NamemRNA_H-canaliculatus_M_contigs77022.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: Pyruvate (kinase n=10 Tax=Phaeophyceae TaxID=2870 RepID=A0A097IU48_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 8.770e-33
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 
Query:    1 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQV 207
            MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQV
Sbjct:  383 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQV 451
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: Pyruvate (kinase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IU23_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 3.830e-28
Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = 1 
Query:    1 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQV 207
            MEPAESVASSAVKTAIDL AAM+VVLTETGTTARL+AKYRPD+PILAFTAA D ARQ+NGYLRNV +QV
Sbjct:  334 MEPAESVASSAVKTAIDLKAAMIVVLTETGTTARLIAKYRPDVPILAFTAAPDTARQINGYLRNVNTQV 402
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BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: Pyruvate (kinase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IU44_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 9.820e-26
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 1 
Query:    7 PAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQV 207
            PAESVASSAVKTAIDL A+MVVVLTETGTTARLLAKYRP++PILAFTAA D ARQ+NGYLRNV +QV
Sbjct:  384 PAESVASSAVKTAIDLKASMVVVLTETGTTARLLAKYRPEVPILAFTAAHDVARQINGYLRNVQTQV 450
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: Pyruvate (kinase n=6 Tax=Sargassum TaxID=3015 RepID=A0A097IU67_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 9.380e-25
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 1 
Query:    1 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQV 207
            +EPAESVASSAVKTAIDL A MV+VL+ETGTTARLLAKYRP MPILAFTAA   ARQMNGYLRNV  +V
Sbjct:  384 IEPAESVASSAVKTAIDLKATMVIVLSETGTTARLLAKYRPQMPILAFTAAYPVARQMNGYLRNVYPEV 452
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: PK_C (domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S4H6_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.640e-20
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:    1 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQ 204
            ME AE+VASSAVKTAID+NA M+VVLTETG TARL+AKYRP+MP+L  TA    ARQ  G+++ V S+
Sbjct:    1 METAEAVASSAVKTAIDINAKMLVVLTETGNTARLVAKYRPEMPVLVLTALEQTARQTEGFVKGVVSR 68
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: Pyruvate (kinase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A833SJ48_PHYIN)

HSP 1 Score: 86.3 bits (212), Expect = 9.910e-20
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:    1 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQ 204
            ME AE+VASSAVKTAID+NA M+VVLTETG TARL+AKYRP+MP+L  TA    ARQ  G+++ V S+
Sbjct:   32 METAEAVASSAVKTAIDINAKMLVVLTETGNTARLVAKYRPEMPVLVLTALEQTARQTEGFVKGVVSR 99
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: Pyruvate (kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC5_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.210e-19
Identity = 45/69 (65.22%), Postives = 59/69 (85.51%), Query Frame = 1 
Query:    1 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQV 207
            M+  ESVASSAVKTAID  A ++V LTETGT+ARL+AKYRP MP++A+T++ + ARQ NGYLRNV+++V
Sbjct:  387 MDGPESVASSAVKTAIDTGATLIVALTETGTSARLIAKYRPSMPVIAYTSSEEVARQCNGYLRNVSTRV 455
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: Pyruvate (kinase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T3Y1_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.860e-19
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:    1 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQ 204
            ME AE+VASSAVKTAID+NA M+VVLTETG TARL+AKYRP+MP+L  TA    ARQ  G+++ V S+
Sbjct:  110 METAEAVASSAVKTAIDINAKMLVVLTETGNTARLVAKYRPEMPVLVLTALEQTARQTEGFVKGVVSR 177
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: PK_C (domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4F141_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.230e-19
Identity = 43/68 (63.24%), Postives = 54/68 (79.41%), Query Frame = 1 
Query:    1 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQ 204
            M+ AE+VASSAVKTAID+NA M+VVLTETG TARL+AKYRP MP+L  TA    ARQ  G+++ V ++
Sbjct:    8 MQTAEAVASSAVKTAIDINAKMLVVLTETGNTARLVAKYRPQMPVLVLTALEQTARQTEGFVKGVVAR 75
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Match: Pyruvate (kinase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJB9_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.370e-18
Identity = 44/68 (64.71%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:    1 MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTAAADAARQMNGYLRNVTSQ 204
            M+ AE+VASSAVKTAID+NA M+VVLTETG TARL+AKYRP+MP+L  TA    ARQ  G+++ V S+
Sbjct:  124 MQTAEAVASSAVKTAIDINAKMLVVLTETGNTARLVAKYRPEMPVLVLTALEQTARQTEGFVKGVVSR 191
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77022.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Pyruvate8.770e-33100.00kinase n=10 Tax=Phaeophyceae TaxID=2870 RepID=A0A0... [more]
Pyruvate3.830e-2886.96kinase n=1 Tax=Ishige okamurae TaxID=233772 RepID=... [more]
Pyruvate9.820e-2686.57kinase n=1 Tax=Dictyopteris undulata TaxID=156997 ... [more]
Pyruvate9.380e-2582.61kinase n=6 Tax=Sargassum TaxID=3015 RepID=A0A097IU... [more]
PK_C2.640e-2066.18domain-containing protein n=1 Tax=Phytophthora cac... [more]
Pyruvate9.910e-2066.18kinase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A83... [more]
Pyruvate1.210e-1965.22kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
Pyruvate3.860e-1966.18kinase n=1 Tax=Phytophthora cactorum TaxID=29920 R... [more]
PK_C6.230e-1963.24domain-containing protein (Fragment) n=1 Tax=Phyto... [more]
Pyruvate1.370e-1864.71kinase (Fragment) n=1 Tax=Phytophthora palmivora v... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs77022contigH-canaliculatus_M_contigs77022:2..208 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FYR2
Preferred namePYK
PFAMsPK,PK_C
Model size207
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00015
KEGG koko:K00873
KEGG ReactionR00200,R00430,R01138,R01858,R02320
KEGG Pathwayko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230
KEGG ModuleM00001,M00002,M00049,M00050
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.7e-31
EggNOG OGsCOG0469@1|root,KOG2323@2759|Eukaryota
EC2.7.1.40
Descriptionpyruvate kinase activity
Cds size207
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854108.3913732-CDS-H-canaliculatus_M_contigs77022:1..2081696854108.3913732-CDS-H-canaliculatus_M_contigs77022:1..208Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs77022 2..208 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs77022.1.1prot_H-canaliculatus_M_contigs77022.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs77022 2..208 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs77022.1.1

>prot_H-canaliculatus_M_contigs77022.1.1 ID=prot_H-canaliculatus_M_contigs77022.1.1|Name=mRNA_H-canaliculatus_M_contigs77022.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=69bp
MEPAESVASSAVKTAIDLNAAMVVVLTETGTTARLLAKYRPDMPILAFTA
AADAARQMNGYLRNVTSQV
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mRNA from alignment at H-canaliculatus_M_contigs77022:2..208+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs77022.1.1 ID=mRNA_H-canaliculatus_M_contigs77022.1.1|Name=mRNA_H-canaliculatus_M_contigs77022.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=207bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77022:2..208+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGAGCCCGCCGAGTCCGTGGCCTCCTCCGCCGTAAAGACCGCCATCGA
CCTCAACGCCGCGATGGTGGTGGTCCTCACCGAGACCGGTACCACGGCCC
GCCTGCTGGCCAAGTACCGCCCGGACATGCCCATCCTGGCCTTCACTGCC
GCAGCCGACGCGGCCAGGCAAATGAACGGGTACCTGAGGAACGTGACGTC
GCAGGTA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77022:2..208+

>mRNA_H-canaliculatus_M_contigs77022.1.1 ID=mRNA_H-canaliculatus_M_contigs77022.1.1|Name=mRNA_H-canaliculatus_M_contigs77022.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=207bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77022:2..208+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGAGCCCGCCGAGTCCGTGGCCTCCTCCGCCGTAAAGACCGCCATCGA
CCTCAACGCCGCGATGGTGGTGGTCCTCACCGAGACCGGTACCACGGCCC
GCCTGCTGGCCAAGTACCGCCCGGACATGCCCATCCTGGCCTTCACTGCC
GCAGCCGACGCGGCCAGGCAAATGAACGGGTACCTGAGGAACGTGACGTC
GCAGGTA
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