mRNA_H-canaliculatus_M_contigs7687.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK74_ECTSI) HSP 1 Score: 289 bits (739), Expect = 5.120e-88 Identity = 131/148 (88.51%), Postives = 138/148 (93.24%), Query Frame = 1
Query: 1 PLPLS-QMDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDRTGVPRDPASVYDGPIGS 441
P+P + QMDYWVRTP CKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTG RR VLERNMFPYDVPTDVEHWTLWSR+DL +D+MEAFV+ WAAENHPH VEWECDNNEGERSIDWFHVHVFFR+GCEDRTGVPRDPASVYDGP GS
Sbjct: 308 PIPRTLQMDYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRAIVLERNMFPYDVPTDVEHWTLWSRKDLPNDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGS 455
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR4_9PHAE) HSP 1 Score: 287 bits (734), Expect = 2.460e-87 Identity = 128/141 (90.78%), Postives = 132/141 (93.62%), Query Frame = 1
Query: 19 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDRTGVPRDPASVYDGPIGS 441
M+YWVRTP CKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTG RRD VLERNMFPYDVPTDVEHWTLWSR DL D+MEAFV+ WAAENHPH VEWECDNNEGERSIDWFHVHVFFR+GCEDRTGVPRDPASVYDGP GS
Sbjct: 310 MEYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPKDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGS 450
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ2_9STRA) HSP 1 Score: 156 bits (395), Expect = 8.740e-40 Identity = 69/118 (58.47%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 19 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFR 372
M++WVR CK K++H+DFID SREQFIE+TVFT P TG RD VLE NMFPY P DVEHWTLWSR D+ ++++A+V EW N PHV W D+N G+RSI WFHVHV+ +
Sbjct: 133 MEFWVRGEECKRLKTEHLDFIDSHYSSREQFIEDTVFTDPMTGEVRDTVLEPNMFPYQTPPDVEHWTLWSRSDMTHEEIQAWVTEWLMVNKPHVRRWNYDDNAGDRSIYWFHVHVYIQ 250
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7P6_GLOUD) HSP 1 Score: 119 bits (298), Expect = 2.790e-28 Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 19 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDK--VLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDR 390
+DYW R+ C K H+D ID+V+ SRE+ I T RD+ +LE NMFPY P +EHWTLWSR ++ D ++EA+V W EN PHV W D N RSID FHVHV+F+V R
Sbjct: 8 IDYWDRSEECLERKWDHMDMIDEVSPSREEHILSTTL--------RDEHIILEPNMFPYTTPDGIEHWTLWSRNEMGDQEVEAYVSSWITENAPHVKSWNFDENSS-RSIDLFHVHVYFQVEAGQR 124
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PGM4_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.540e-27 Identity = 56/119 (47.06%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 19 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRV 375
++YW RT C K H+DFID SRE FI ET + RD +LE NMFPYD P D+ HWT+W R ++ ++++ +V W + +P++VEW D+N GERSID +HVHV+FRV
Sbjct: 69 IEYWDRTDDCINKKWDHMDFIDANFDSRENFILETAL------LNRDHMLEPNMFPYDTPEDILHWTMWCRWEMSEEELIKYVENWM-KKYPYIVEWNYDDNAGERSIDLYHVHVYFRV 180
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDG9_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.250e-27 Identity = 58/124 (46.77%), Postives = 73/124 (58.87%), Query Frame = 1
Query: 19 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDR 390
++YW R+ C K H+D IDD SRE+ I T T +LE NMFPY P +EHWTLWSR++L D+++E V W AE PHV+ W D+N RSID FHVHV+FRV R
Sbjct: 17 IEYWSRSDECLERKWDHLDKIDDSGLSREEHILATTLKGSRT------LLEPNMFPYSTPAGIEHWTLWSRDELSDEEVERCVGIWIAEKAPHVLSWNFDDNPA-RSIDLFHVHVYFRVAVGQR 133
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KAU7_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.020e-25 Identity = 57/135 (42.22%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 19 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRVGCEDRTGVPRDPASVY 423
+ YW RT C K H+D +DD+ SRE+ I T + T LE NMFPYD P +EHWTLWSR ++D+ ++E +V +W EN PHV W D N RSID FHVHV+ + P P+ +Y
Sbjct: 63 LQYWDRTDECLERKWAHMDMVDDLFESREELILATTLSHTETA------LEPNMFPYDTPDGIEHWTLWSRHEMDNAEIEEYVCDWLRENAPHVERWNYDENLS-RSIDIFHVHVYLQA--------PAQPSFLY 182
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XF23_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.300e-24 Identity = 55/120 (45.83%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 16 QMDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRV 375
+++YW RT C K H+D +D V SRE I + T VLE NMFPYD +EHWTLWSR++LDD +E ++ W EN PHV W D RSID FHVHV+F+V
Sbjct: 35 EIEYWGRTDECLERKWAHMDMVDKVFKSRETCILSAMLKGAHT------VLELNMFPYDTREGIEHWTLWSRDELDDSAIEKYICSWLRENAPHVESWNFDEKLA-RSIDIFHVHVYFKV 147
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5Q1_PYTIN) HSP 1 Score: 109 bits (272), Expect = 2.680e-24 Identity = 55/119 (46.22%), Postives = 70/119 (58.82%), Query Frame = 1
Query: 19 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRV 375
++YW RT CK K H+D I D S E E +F G R LE NMFPYD P +EHWTLW +L+ +Q++ +V W N PHV+ W D+N ERSID FHVHV+F+V
Sbjct: 32 IEYWSRTDECKERKWDHLDDIADKYGSAE----EHIFATTLNG--RTAFLEPNMFPYDTPAGIEHWTLWHVNELNHEQIKQYVENWIDANAPHVLRWNYDDNP-ERSIDIFHVHVYFQV 143
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Match: Hypothetical (protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKL5_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.260e-24 Identity = 58/119 (48.74%), Postives = 73/119 (61.34%), Query Frame = 1
Query: 19 MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLERNMFPYDVPTDVEHWTLWSREDLDDDQMEAFVREWAAENHPHVVEWECDNNEGERSIDWFHVHVFFRV 375
+++W RT CK AK +H D ID + SRE + +T T + D VLE NMFPY P VEH+TLWS EDL +Q+ +FV W + PHV W+ D+N GERSID FHVHVF
Sbjct: 352 LEWWERTDHCKEAKLRHTDRIDHMCGSRESLVLKT------TLWKEDIVLEPNMFPYYTPYGVEHYTLWSVEDLTHEQIVSFVDRWLYRHMPHVRRWQYDDNSGERSIDLFHVHVFIET 464 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7687.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7687.2.1 >prot_H-canaliculatus_M_contigs7687.2.1 ID=prot_H-canaliculatus_M_contigs7687.2.1|Name=mRNA_H-canaliculatus_M_contigs7687.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=230bp MDYWVRTPRCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGVRRDKVLback to top mRNA from alignment at H-canaliculatus_M_contigs7687:3195..5217- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7687.2.1 ID=mRNA_H-canaliculatus_M_contigs7687.2.1|Name=mRNA_H-canaliculatus_M_contigs7687.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2023bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7687:3195..5217- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7687:3195..5217- >mRNA_H-canaliculatus_M_contigs7687.2.1 ID=mRNA_H-canaliculatus_M_contigs7687.2.1|Name=mRNA_H-canaliculatus_M_contigs7687.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=690bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7687:3195..5217- (Hapterophycus canaliculatus Oshoro7m male)back to top |