mRNA_H-canaliculatus_M_contigs76836.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: redoxin (domain-containing protein n=1 Tax=Acuticoccus sp. M5D2P5 TaxID=2910977 RepID=UPI001F3B126B) HSP 1 Score: 99.0 bits (245), Expect = 3.580e-24 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 1
Query: 1 ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRGLHQV 285
A + E+GW + HSLS+A+ L +Y++D E P+AEPGL+++NP GL V+ SN+ S RPDL+VV DGI+G QD+ LPIRG+ +
Sbjct: 78 AAADLAEHGWRFALGHSLSLADMNALGLYVSDPVSTEETDRPFAEPGLFVVNPNGLIHVLGISNAASCRPDLDVVLDGIVGIQDKGLPIRGMRGI 172
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: redoxin (domain-containing protein n=1 Tax=Acuticoccus kandeliae TaxID=2073160 RepID=UPI001300A83E) HSP 1 Score: 98.6 bits (244), Expect = 4.020e-24 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 1 ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRGL 276
A E GW + HSLS+A+ + L +Y++D E P+AEPGL++INP GL +++ SN+ S RPDL+V+ DGII TQ+ +LPIRGL
Sbjct: 69 AEADFREFGWRFGIGHSLSLADMEALGLYISDPRSPTETDRPFAEPGLFVINPNGLIHILSVSNTASCRPDLDVLLDGIISTQENDLPIRGL 160
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: redoxin (domain-containing protein n=1 Tax=Roseobacter sp. YSTF-M11 TaxID=2859783 RepID=UPI001C5F8B2D) HSP 1 Score: 88.2 bits (217), Expect = 4.380e-20 Identity = 40/92 (43.48%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 1 ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRGL 276
A + E W PV + LS + +QL ++++D AE P+AEPGL++IN +GL Q++ SNS SVRPDL+++ DGI +++ +PIRGL
Sbjct: 68 AEADVAEFKWQFPVGYDLSFGQMRQLGLFVSDSIKPAETGRPFAEPGLFVINGDGLVQIVEMSNSASVRPDLDLLLDGIRSIKEKGIPIRGL 159
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: AhpC/TSA (family protein n=1 Tax=Roseomonas oryzicola TaxID=535904 RepID=UPI001ADF3998) HSP 1 Score: 88.2 bits (217), Expect = 5.850e-20 Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 1 ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRGLH 279
A + + GW PV + L VA+ Q L +Y++D E P+AEPGL+LINP+G Q++ SN+P RPDL + G Q+ N PIRG H
Sbjct: 80 AAADVAQFGWRFPVGYGLGVAQMQALGLYVSDPRSPQETDRPFAEPGLFLINPDGRVQIVDISNAPFARPDLAAIARGAKRIQEMNYPIRGTH 172
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: AhpC/TSA (family protein n=1 Tax=Roseomonas sp. HJA6 TaxID=2846776 RepID=UPI001C674E23) HSP 1 Score: 86.7 bits (213), Expect = 2.390e-19 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 1 ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRG 273
A + E GW PV + L+VA+ Q+L +Y++ E P+AEPGL+LINPEG Q++ SN+P RPDL + G Q+ N PIRG
Sbjct: 80 ATADVAEFGWRFPVGYGLTVAQMQELGLYVSTPRSAQETDRPFAEPGLFLINPEGRVQIVDISNAPFSRPDLAAIARGAKRIQEMNYPIRG 170
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: redoxin (domain-containing protein n=1 Tax=Roseomonas lacus TaxID=287609 RepID=UPI001669458D) HSP 1 Score: 86.3 bits (212), Expect = 3.300e-19 Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 19 ENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRGLH 279
E GW P+ + LSV + Q L +Y++D E P+AEPGL+LINP G Q++ SN+P RPDL + G QD N PIRG H
Sbjct: 86 EFGWRFPLGYGLSVEQMQALGLYVSDPRSPQETDRPFAEPGLFLINPAGTVQIVDISNAPFSRPDLTAIARGAKRIQDMNYPIRGTH 172
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: Redoxin (domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T3Y8_9HYPH) HSP 1 Score: 85.9 bits (211), Expect = 4.660e-19 Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 1 ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRGLH 279
A + E GW PV + L++ +L +Y++D E P+AEPGL+L+NP+G Q+I SN+P RPDL+++ +G+ +++ P+RG H
Sbjct: 80 AEADVAEQGWRFPVGYGLTIEHMCKLGLYVSDPRSPQETDRPFAEPGLFLVNPQGSAQIIDVSNAPFARPDLQMILNGVKTIIEKSYPVRGTH 172
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: AhpC/TSA (family protein n=2 Tax=Loktanella sp. SALINAS62 TaxID=2706124 RepID=UPI002013B790) HSP 1 Score: 85.5 bits (210), Expect = 6.430e-19 Identity = 36/91 (39.56%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 1 ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRG 273
A++ + E GW PVA LS + +QL +Y+++ E P+AEPG+++ NP+GL Q++ SN+P RPDL+ + +G+ Q+++ PIRG
Sbjct: 79 AQKEVSEEGWKFPVACELSQDQMRQLGLYISEPRSAQETDRPFAEPGIFVTNPDGLLQIVDISNAPFARPDLQSLLNGLKFIQEKDYPIRG 169
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: AhpC/TSA (family protein n=1 Tax=Halomonas sp. Y2R2 TaxID=2562282 RepID=A0A5C1NJU2_9GAMM) HSP 1 Score: 85.5 bits (210), Expect = 6.580e-19 Identity = 37/91 (40.66%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 1 ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRG 273
A T E W PVA++LS + ++L +Y+++ E P+AEPGL++ NP+GL Q++ SN+P RPDL++V +G+ +++N PIRG
Sbjct: 79 ATGTANEENWRFPVAYALSPDQMRELGLYVSEPRFSQETEWPFAEPGLFVTNPDGLLQIVDISNAPFARPDLQIVLNGLKFIREKNYPIRG 169
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Match: AhpC/TSA (family protein n=1 Tax=Tateyamaria sp. Alg231-49 TaxID=1922219 RepID=UPI000D5598AD) HSP 1 Score: 85.5 bits (210), Expect = 6.890e-19 Identity = 38/94 (40.43%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLINPEGLTQVIATSNSPSVRPDLEVVRDGIIGTQDRNLPIRGLHQ 282
A+ ++E G +LP+ + L++ + + L VY++D E P+AEPGL++IN EGL Q++ SN+P +RPDL+ V GI ++ + PIRG H+
Sbjct: 80 AQAMVDEKGLSLPMGYDLNIEQMRALGVYISDPRSPQETDRPFAEPGLFVINAEGLIQMVDVSNAPFLRPDLQSVLKGIAFIRNNDYPIRGTHK 173 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76836.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs76836.1.1 >prot_H-canaliculatus_M_contigs76836.1.1 ID=prot_H-canaliculatus_M_contigs76836.1.1|Name=mRNA_H-canaliculatus_M_contigs76836.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=96bp ARRTIEENGWTLPVAHSLSVAECQQLSVYLTDHEDGAELSGPYAEPGLYLback to top mRNA from alignment at H-canaliculatus_M_contigs76836:9..296+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs76836.1.1 ID=mRNA_H-canaliculatus_M_contigs76836.1.1|Name=mRNA_H-canaliculatus_M_contigs76836.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=288bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76836:9..296+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76836:9..296+ >mRNA_H-canaliculatus_M_contigs76836.1.1 ID=mRNA_H-canaliculatus_M_contigs76836.1.1|Name=mRNA_H-canaliculatus_M_contigs76836.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=288bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76836:9..296+ (Hapterophycus canaliculatus Oshoro7m male)back to top |