mRNA_H-canaliculatus_M_contigs7671.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW6_ECTSI) HSP 1 Score: 248 bits (632), Expect = 9.270e-73 Identity = 130/174 (74.71%), Postives = 139/174 (79.89%), Query Frame = 1
Query: 31 DSQSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTEEXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVIRCVSAQTFF 552
D +SG LKRSTY EYIREAAGVWQVVLIF + QVLVMGVTVWLARWSRQ+EE VSL RA+LTFFSLVKASHRLHDRMLKR++RAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDF+ICSFMVTGGTLIIFFVNPWVV+ V A +F
Sbjct: 1046 DQESGGLKRSTYGEYIREAAGVWQVVLIFF-SMAGGQVLVMGVTVWLARWSRQSEEEQDRSRNVIVLALLTAAAVVVSLFRAVLTFFSLVKASHRLHDRMLKRVVRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFIICSFMVTGGTLIIFFVNPWVVLSMVPAMWYF 1218
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE) HSP 1 Score: 244 bits (622), Expect = 2.300e-71 Identity = 128/174 (73.56%), Postives = 139/174 (79.89%), Query Frame = 1
Query: 31 DSQSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTEEXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVIRCVSAQTFF 552
D +SG LKRSTY EYIREAAGVWQV+LIF + QVLVMGVTVWLARWSRQ+EE VSL RA+LTFFSLVKASHRLH+RMLKR++RAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDF+ICSFMVTGGTLIIFFVNPWVV+ V A +F
Sbjct: 855 DQESGGLKRSTYLEYIREAAGVWQVLLIFF-SMAGGQVLVMGVTVWLARWSRQSEEEQDRSRYVIVLALLTAAAVVVSLFRAVLTFFSLVKASHRLHNRMLKRVVRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFIICSFMVTGGTLIIFFVNPWVVLSMVPALWYF 1027
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: Multidrug (resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI) HSP 1 Score: 238 bits (606), Expect = 3.240e-69 Identity = 123/174 (70.69%), Postives = 136/174 (78.16%), Query Frame = 1
Query: 31 DSQSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTEEXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVIRCVSAQTFF 552
D +SG LKRSTYWEYIREAAGVWQVVLIF + QVLVMGVTVWLARWSRQ+EE VSL RA+LTFFSLVKASHRLH+RMLKR++RAPVLFFDSNPVGRILNRFTKD+HFMDDLLPMTLYD ++C FMV G TLIIFFVNPWVV+ + A +F
Sbjct: 804 DQESGRLKRSTYWEYIREAAGVWQVVLIFF-SMAGGQVLVMGVTVWLARWSRQSEEEQDRSRNVIVLALLTAAAVVVSLFRAVLTFFSLVKASHRLHNRMLKRVVRAPVLFFDSNPVGRILNRFTKDVHFMDDLLPMTLYDCIMCGFMVMGNTLIIFFVNPWVVLSLLPAMWYF 976
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: Multidrug (resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI) HSP 1 Score: 238 bits (606), Expect = 3.270e-69 Identity = 124/174 (71.26%), Postives = 136/174 (78.16%), Query Frame = 1
Query: 31 DSQSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTEEXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVIRCVSAQTFF 552
D +SG LKRSTYWEYIREAAGVWQVVLIFL + QVLVMGVTVWLARWSRQ+EE V+L RA+L FFSLVKASHRLH+RMLKR++RAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYD + CSFMV G TLIIFFVNPWVV+ + A +F
Sbjct: 835 DQESGRLKRSTYWEYIREAAGVWQVVLIFL-SMAGGQVLVMGVTVWLARWSRQSEEEQDRSRNVIVLALLSAAAVVVALSRAVLAFFSLVKASHRLHNRMLKRVVRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDCITCSFMVMGNTLIIFFVNPWVVLSLLPAMWYF 1007
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE) HSP 1 Score: 229 bits (585), Expect = 2.140e-66 Identity = 122/174 (70.11%), Postives = 135/174 (77.59%), Query Frame = 1
Query: 31 DSQSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTEEXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVIRCVSAQTFF 552
D +SG LKRSTYWEYIREAAG+WQVVLIFL + QVLVMGVTV LARWSRQ+E+ V+L RA+L FFSLVKASHRLH+RML+R++RAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYD V CSFMVTG TLII FVNPWVV+ + A FF
Sbjct: 754 DQESGRLKRSTYWEYIREAAGIWQVVLIFL-SMAGGQVLVMGVTVSLARWSRQSEKEQDRSRNVIVLALLSAAAVVVALSRAVLAFFSLVKASHRLHNRMLERVVRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDCVTCSFMVTGNTLIILFVNPWVVLSLLPALWFF 926
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S2X5_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.720e-25 Identity = 67/162 (41.36%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 40 SGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTEEXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVI 525
+GV++ T+ Y+ +A G VV+ L QV V+ V + W+ ++EE +S+ R++L FF +KASHRLHD+ML ++RA + FFD NP+GRILNRF+ D+ +DDLLP TL+DF +CSFMV GG FV P V+I
Sbjct: 137 AGVVQSRTFINYM-QAMGGPIVVVGMLILFAAAQVSVLYTVVVVGEWAEKSEEEQRSLETIGFVLGMMGTVVFLSVTRSVLGFFFAIKASHRLHDKMLGVVLRAKIEFFDCNPLGRILNRFSADVGIIDDLLPTTLFDFTMCSFMVIGGIATTAFVLPLVLI 297
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: multidrug (resistance-associated protein 4-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03D2CB) HSP 1 Score: 107 bits (268), Expect = 8.210e-24 Identity = 60/175 (34.29%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 10 DLALFGRDSQSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTEEXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVIRCV 534
DL + D G + TYW+Y R +V + +C QV+++ VWL+ +++++E S +RA +LV+ S RLHD+M+ ++ APVLFFDSNPVGRILNRF+KD+ ++D+LLP T + + +++ T++ F NPWV+ V
Sbjct: 711 DLEISEEDCTIGSVTLMTYWDYFRSGLHTLAIVGL-VCLFFIAQVMIVSPDVWLSFLTKKSKEEQKDKFNFIFYGCLVLGSLIFSSIRAYAFLRTLVRCSQRLHDKMVVAVVEAPVLFFDSNPVGRILNRFSKDVGYLDELLPKTFLTAIQLTLLISASTVVPTFTNPWVLFAVV 884
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: Multidrug (resistance-associated protein 4 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RGW9_STYPI) HSP 1 Score: 107 bits (268), Expect = 8.500e-24 Identity = 60/175 (34.29%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 10 DLALFGRDSQSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTEEXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVIRCV 534
DL + D G + TYW+Y R +V + +C QV+++ VWL+ +++++E S +RA +LV+ S RLHD+M+ ++ APVLFFDSNPVGRILNRF+KD+ ++D+LLP T + + +++ T++ F NPWV+ V
Sbjct: 711 DLEISEEDCTIGSVTLMTYWDYFRSGLHTLAIVGL-VCLFFIAQVMIVSPDVWLSFLTKKSKEEQKDKFNFIFYGCLVLGSLIFSSIRAYAFLRTLVRCSQRLHDKMVVAVVEAPVLFFDSNPVGRILNRFSKDVGYLDELLPKTFLTAIQLTLLISASTVVPTFTNPWVLFAVV 884
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: ATP-binding (cassette sub-family C member 4-like isoform X1 n=8 Tax=Haliotis TaxID=6452 RepID=UPI00201EC0B2) HSP 1 Score: 105 bits (262), Expect = 5.500e-23 Identity = 66/195 (33.85%), Postives = 93/195 (47.69%), Query Frame = 1
Query: 37 QSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTE-----------------------EXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVIRCVSAQTFF 552
Q G + Y +Y + G++ +L+ L +L+ +M WL+RWS + E LLRA+L F V AS LH+RM +I+RAP+ FFD+NPVGRILNRF+KD+ MDDLLP+T +DFV C ++ G ++ +NPWV I V F
Sbjct: 693 QEGTVGFGVYVKYFKAGTGIFMFILLVLLNLLAQTAYIMSDW-WLSRWSNEEELRYAATQVFQEQMTLFNSSNITVPEVDTNVNIYIFTSIVVSVFLFGLLRALLFFKIAVDASQALHNRMFAKILRAPISFFDNNPVGRILNRFSKDVGHMDDLLPITFFDFVQCFLLIIGIIIVAGVINPWVFIPTVPLCVLF 886
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UKF9_POCDA) HSP 1 Score: 105 bits (261), Expect = 7.380e-23 Identity = 58/172 (33.72%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 10 DLALFGRDSQSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVMGVTVWLARWSRQTEEXXXXXXXXXXXXXXXXXXXXVSLLRAILTFFSLVKASHRLHDRMLKRIIRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFVICSFMVTGGTLIIFFVNPWVVI 525
DL + D G + +TYW+Y R +V +F C QV+++ VWL+ +++++E S +RA ++ V+ + RLHD+M+ I++APVLFFDSNPVGRILNRF+KD+ ++D+LLP T + + ++ T++ F N WV++
Sbjct: 693 DLEISKEDRTIGSVTLTTYWDYFRSGLHALAIVGLF-CLFFIAQVMIVSPDVWLSFLTKKSQEEQKDKLNFIFYGCLVLGSLIFSSIRAYAFLWTSVRCAERLHDKMVAAIVQAPVLFFDSNPVGRILNRFSKDVGYLDELLPKTFLTAIQLTLLILASTIMPTFTNFWVLL 863 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7671.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7671.2.1 >prot_H-canaliculatus_M_contigs7671.2.1 ID=prot_H-canaliculatus_M_contigs7671.2.1|Name=mRNA_H-canaliculatus_M_contigs7671.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=184bp MSNDLALFGRDSQSGVLKRSTYWEYIREAAGVWQVVLIFLCDLIKFQVLVback to top mRNA from alignment at H-canaliculatus_M_contigs7671:3140..4868- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7671.2.1 ID=mRNA_H-canaliculatus_M_contigs7671.2.1|Name=mRNA_H-canaliculatus_M_contigs7671.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1729bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7671:3140..4868- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7671:3140..4868- >mRNA_H-canaliculatus_M_contigs7671.2.1 ID=mRNA_H-canaliculatus_M_contigs7671.2.1|Name=mRNA_H-canaliculatus_M_contigs7671.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=552bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7671:3140..4868- (Hapterophycus canaliculatus Oshoro7m male)back to top |