mRNA_H-canaliculatus_M_contigs7668.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7668.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7668.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J1_9PHAE)

HSP 1 Score: 605 bits (1559), Expect = 5.060e-207
Identity = 303/373 (81.23%), Postives = 324/373 (86.86%), Query Frame = 1
Query:    1 KVCFFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDTQEDGGADLAGSAALTKAKARVQAKTDGAAVGPGSEGREEERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGGGKRFTGHQESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRGQGCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGPGYTLPPGLAGGGAPGEGHGGXXXXXXXPAEYGAKVRGDATGGEDRARMAEHVKRLRPAVQELAGLEFEAQNIWLGLVHGRF 1119
            +VCFFSATLHSPEIAKLAD+ICDRPTWVDLKGRDTVPQTVHHVVVRVDPD   + G           AKA+VQ +TDG  V  GSEGR+EERAE+LKRMKPQVLL VVEALGMD+AIIFCRTNLDCDLLEEFLT  GGGKRFTGHQESGDQ+A+SCCVLAGMRSMQQRRANL AFK+GDVRFLICTDVAARGVDIKGLPYV+NMTLPDVPENYIHRIGRVGRQDCLGLAVSIVA DGCKEKVWYHKNCRNRGQGCTNR+ LSKGGCT+WYDEPGLLKEVEALLQAPIAE+GPG+ LP GL GGG    G            +YGAK RGDATGGED+ARM EHVK LRPAVQELAGLEF+AQNIWL ++HGRF
Sbjct:  402 QVCFFSATLHSPEIAKLADSICDRPTWVDLKGRDTVPQTVHHVVVRVDPDKDGEVGP--------VPAKAKVQPRTDG--VCAGSEGRDEERAEKLKRMKPQVLLGVVEALGMDRAIIFCRTNLDCDLLEEFLTQAGGGKRFTGHQESGDQDAYSCCVLAGMRSMQQRRANLDAFKDGDVRFLICTDVAARGVDIKGLPYVINMTLPDVPENYIHRIGRVGRQDCLGLAVSIVAQDGCKEKVWYHKNCRNRGQGCTNREALSKGGCTVWYDEPGLLKEVEALLQAPIAELGPGFALPQGLQGGGGKSGG-----TSPAGAVKYGAKGRGDATGGEDKARMTEHVKSLRPAVQELAGLEFQAQNIWLDMMHGRF 759          
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: Atp-dependent (rna helicase ddx1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJD8_9STRA)

HSP 1 Score: 372 bits (954), Expect = 3.600e-116
Identity = 198/373 (53.08%), Postives = 244/373 (65.42%), Query Frame = 1
Query:    1 KVCFFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDTQEDGGADLAGSAALTKAKARVQAKTDG--AAVGPGSEGRE-EERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGGGKRFTGHQESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRGQGCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAE--MGPGYTLPPGLAGGGAPGEGHGGXXXXXXXPAEYGAKVRGDATGGEDRARMAEHVKRLRPAVQELAGLEFEAQNIWLGL 1104
            +VCFFSATLHSPEI +LA  ICDRPTWVDLKG+D+VP+ VHHVVV +DP+        L      T + A     TD   AA     +  E E R++ +KR+KP VLL+++EA  M+Q IIFCRTNLDC+ LE+FL   GGG+ F G  E G +N +SCCVLAGMRSM +RR NL AFKEGDVRFLICTDVAARG+DI+ LP+V+N TLPD  ENYIHR+GRVGR DCLGLA+S+VA  G +EKVWYH  C N+G+GC+NR+   KGGCT+W+DE  +L++VEA L        + P + LPP +                    A+YG  V            +A+HV  LRPAVQEL  LE  AQ  WL L
Sbjct:  412 QVCFFSATLHSPEITELAKAICDRPTWVDLKGKDSVPEAVHHVVVEMDPENSA-----LQTLLHPTSSPAAQHVVTDNVHAASSLSQDPEEVERRSDMIKRLKPLVLLKIIEAYDMEQCIIFCRTNLDCNNLEQFLNFAGGGQMFKGKVEKGKENIYSCCVLAGMRSMDERRRNLQAFKEGDVRFLICTDVAARGIDIQNLPFVINYTLPDAVENYIHRVGRVGRADCLGLAISLVAASGYQEKVWYH-TCTNKGKGCSNREVTDKGGCTVWFDEYDMLRQVEARLHTETIPRLVPPNFALPPAIKSS--------------LGGAKYGEAVSKQVVN----ETVAKHVALLRPAVQELIDLEQRAQTTWLSL 760          
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVU8_9STRA)

HSP 1 Score: 345 bits (884), Expect = 2.410e-108
Identity = 202/395 (51.14%), Postives = 244/395 (61.77%), Query Frame = 1
Query:    7 CFFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDTQ-EDGGADLAGSAALTKAKARVQAKTDGAAVGPGSEGREEERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGGGKRFTGHQESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRGQGCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGP-GYTLPPGLAGGGAPGEGHGGXXXXXXXPAEYGAKVRGDATGGEDRARMAEHVKRLRPAVQELAGLEFEAQNIWLGLVHGRF*LHQSSLLGTSRLILPPKGKCY 1185
            CFFSATLHSPEIA L+  +C  PTWVDLKG+D VP TVHHVV+RVDP           A ++  T A  R      GA      +G++   +E +K +KPQ LLRV+ AL MD  ++FCRTNLDCDLLEEFL + GGG+RF G  E G +N +SCCVL+GMRSM +RR NL AFKEGDVRFLICTDVAARG+DI+GLPYVVN+TLPDVPENYIHRIGRVGR D +GLAVS+VA    +E+VWY +N     Q  T RD   KGG  +WY+EP LLK++E  +  P+ E+ P  + LP  LA                   + YG     D TGG   A  A H+  L+  V  L  LE  AQ+IWLGL           L G   L  PP G  +
Sbjct:  135 CFFSATLHSPEIADLSTRLCQNPTWVDLKGKDAVPDTVHHVVIRVDPSAPFATSLMTEAWASPTTDACHRGGNLRGGAKALTALQGKDR-LSETIKLVKPQFLLRVINALDMDMCLLFCRTNLDCDLLEEFLVEAGGGRRFNGKAEKGKENRYSCCVLSGMRSMDERRRNLAAFKEGDVRFLICTDVAARGIDIQGLPYVVNVTLPDVPENYIHRIGRVGRADRMGLAVSLVATT--EERVWYCQNKLKPPQSDT-RD-YDKGGNCVWYNEPELLKQIEKRVGQPLLELQPPDFRLPTELA------------------TSNYGEAA--DDTGGYS-ASAAAHLDELQSDVARLMQLEVSAQHIWLGL---------HMLGGVDHLPQPPSGSAH 494          
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BR48_9STRA)

HSP 1 Score: 313 bits (803), Expect = 7.550e-95
Identity = 171/316 (54.11%), Postives = 212/316 (67.09%), Query Frame = 1
Query:    1 KVCFFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDT------QEDGGADLAGSAALTKA-------KARVQAKTDGAAVGPGSEGREEERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGGGKRFTGHQESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRGQGCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGPG-YTLPPGLAG 906
            +VCFFSATLHSPEI KL D IC  PTWVDL G   VP+TVHHV + +D         +++ G+  +G+  +T A       K RV  K   A  G G E  +   +ER+K  KP  LL+V++AL MD  +IFCRTNLDCDLLE+FLTD GGG  F G  E G +N +SCCV++GMRSM++RR +L AFK+GDVR LICTDVAARG+DIKGLP+VVNMTLPD+PENY+HRIGRVGR + +GLAVSIV+     E+VWY +  R   Q  TN     +GG  +WYDEP LL++VE  L   I  +    Y LPP L G
Sbjct:  265 QVCFFSATLHSPEIMKLGDRICSHPTWVDLNGEKHVPETVHHVSLSLDESLVARLLGEQEKGSLSSGATYVTDACHRGGQLKQRVNLK---AMAGGGDE--KAYASERVKLSKPLALLKVIDALDMDMCLIFCRTNLDCDLLEQFLTDAGGGSSFRGKAEKGKENRYSCCVMSGMRSMKERRESLAAFKDGDVRLLICTDVAARGIDIKGLPFVVNMTLPDMPENYVHRIGRVGRAERMGLAVSIVST--VSERVWYCQKGRKPPQNNTN--DYDRGGNCIWYDEPDLLRKVEERLGKSILPLDSDTYKLPPELGG 571          
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: DEAD (box protein 1 n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F4K4_9ALVE)

HSP 1 Score: 298 bits (764), Expect = 4.480e-88
Identity = 177/391 (45.27%), Postives = 230/391 (58.82%), Query Frame = 1
Query:   10 FFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDTQEDGGADLAGSAALTKAK-ARVQAKTDGAAVGPGSEGRE---EERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGGGKRFTGHQESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRGQGCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGPGYTLPPGLAG--GGAPGEGHG--------------------------GXXXXXXXPAEYGAKVRGDATGGEDRARMAEHVKRLRPAVQELAGLEFEAQ 1086
            FFSATLH PE+ +  +++CD+PTWVDLKGR ++P TVH V   +DP         L  SA+ T    A  + +TDG      +  ++   E  +E +K  KPQ L+ + +AL M+  ++FCRTNLDCD LE++L  +GGG+ F+G  E+G +N +SC VLAGMR  ++RR NL  FK GDVRFLICTDVAARG+DIK LP+++ MTLPD P+ + HR+GRVGR D +GLAVS+ A +  KEKVWYHK C NRG+GC N   + +GGCT+WYDEPG LK +E  +   I  M P      G+     G PG+G G                          G          YG K R DA   E  A    H+K L PAVQ+L  LE  AQ
Sbjct:  402 FFSATLHGPEVRQAIESLCDKPTWVDLKGRPSIPDTVHFVRYAIDPRRP----LPLLKSASKTSTPPALSRPQTDGVHARDDTRPQQTTPEAFSENIKFQKPQALVLIADALRMETCLVFCRTNLDCDNLEKYLNQLGGGRGFSGKAETGKENPYSCVVLAGMRQQEERRRNLEHFKSGDVRFLICTDVAARGLDIKELPFLMMMTLPDDPDQFFHRVGRVGRADRMGLAVSLSASE--KEKVWYHK-CPNRGRGCENTRLVEQGGCTIWYDEPGYLKAIEERVGKQIPVMDPLDLSVEGVLSPSSGQPGQGKGEEGAXXXXXXXXXXXXXXXXXGGTQPGVAGKAGAMVMYG-KAREDAGMKETLA----HLKSLSPAVQKLLELEAAAQ 780          
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: DEAD (box protein 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U292_CHLSO)

HSP 1 Score: 301 bits (771), Expect = 7.130e-88
Identity = 180/375 (48.00%), Postives = 228/375 (60.80%), Query Frame = 1
Query:    1 KVCFFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDTQEDGGADLAGSAALTKAKARVQAKTDGAAVGPGSEGREEERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGGGKR-FTGHQESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRG------QGCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGPGYTLPPGLAGGGAPGEGHGGXXXXXXXPAEYGAKVRGDATGGEDRARMAEHVKRLRPAVQELAGLEFEAQNIWLGL 1104
            +V  FSATLHSPE+  LAD IC  P  +DLKG+D VP+TV HV+VR DP  QED     +     T     + A       G  +    E  +E +KR+K + L R+++A  MDQ +IFCRTN DCD LE+FL  +GGG   F G +E+G +N +SCCVLAG RSM +RRA L AFKEGDVRFLICTDVAARG+DI+GLPYV+NMTLPD  E+YIHR+GRVGR D +GLA+S+V+     EKVWY   C  +G          N  T  +GG T+WYDEP LL++VE  L  PI  +    +LP  +A   A      G        A+YG +      GG     + E V+ +RPAVQELA LE +AQ  +  L
Sbjct:  589 QVLLFSATLHSPEVRALADKICQNPIIIDLKGKDAVPETVDHVLVRCDP--QEDRSWLQSNPEVFTD---NIHALDR---TGQPNLDTRENWSEAVKRLKQRYLQRIIDAFQMDQCLIFCRTNFDCDNLEKFLNSLGGGAGGFRGKRETGKENPYSCCVLAGARSMDERRAALEAFKEGDVRFLICTDVAARGIDIQGLPYVINMTLPDRSEDYIHRVGRVGRADTMGLAISLVS--SVPEKVWY---CTVKGIKPWLAPDAKNTRTNEQGGHTIWYDEPQLLQDVEKRLTRPIPALAADLSLPSEIAARVA------GTQAGSGGAAQYGQQ-----RGGGVSKDVMERVQAVRPAVQELARLEHQAQTSFFQL 939          
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: DEAD (box protein 1 n=3 Tax=Micromonas pusilla TaxID=38833 RepID=C1N2M1_MICPC)

HSP 1 Score: 298 bits (762), Expect = 8.220e-88
Identity = 179/369 (48.51%), Postives = 220/369 (59.62%), Query Frame = 1
Query:    1 KVCFFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDTQEDGGADLAGSAALTKAKARVQAKTDGAAVGPGSEGREEERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGG--GKRFTGHQ-ESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRGQ----GCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGPGYTLPPGLAGGGAPGEGHGGXXXXXXXPAEYGAKVRGDATGGEDRARMAEHVKRLRPAVQELAGLEFEAQ 1086
            +V  FSATLHSPEIA L+D +C+ PTWVDLKG+D  P+TVHH +V +D D   D  A L+  A      A    K D AA           R++R K  KP  L  +V+   MDQ +IFCRTN DCD LE FL  +GG  G++  G + E G QN +SC VL G RSM++RR NL  FKEGDVRFL+CTDVAARG+DIKGLP+VVNMTLPD  E+Y+HR+GRVGR D  GLA+S+V+    KEKVWY   C  +G       T  D  +      WYDEP LLKE+EA L   +  +   Y+LP  +AG           XXXXXX       V G   G E+ A     ++   PAV+ LA LEFEAQ
Sbjct:  440 QVLLFSATLHSPEIASLSDVLCENPTWVDLKGKDATPETVHHAMVMIDDDESVDVDA-LSPRAVTDNVHAFDDVKNDPAA----------RRSQRTKLRKPHALKAIVDKYNMDQCLIFCRTNFDCDNLETFLNTIGGDGGRKHAGRKLEKGPQNPYSCVVLGGARSMEERRRNLKLFKEGDVRFLVCTDVAARGLDIKGLPFVVNMTLPDRSEDYVHRVGRVGRADTYGLAISLVS--AAKEKVWY---CSMKGHKPWFNPTREDCATH---VAWYDEPKLLKEIEARLGGDVKALNADYSLPASIAG-----------XXXXXXXXXXXXIVYGQRRGNEESAETCARLEAYAPAVRRLAQLEFEAQ 778          
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: ATP-dependent (RNA helicase DDX1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S313_9CHLO)

HSP 1 Score: 296 bits (759), Expect = 1.140e-87
Identity = 178/376 (47.34%), Postives = 232/376 (61.70%), Query Frame = 1
Query:    1 KVCFFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDTQEDGGADLAGSAALTKAKARVQAKTDGAAVGPGSEGREEERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGGGK--RFTGHQESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRG----QGCTNRD--TLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGPGYTLPPGLAG--GGAPGEGHGGXXXXXXXPAEYGAKVRGDATGGEDRARMAEHVKRLRPAVQELAGLEFEAQNIWL 1098
            +V  FSATLHS E+  +A  IC  P+ VDLKGR+ VP TV HV+V VDP         L  S  +         +T  +   P      E  +  +KR+KP+VL R+++A  M+Q +IFCRTN DCD LE+FL  +GGG+  R+ G +ESG +N +SCCVLAG RS  QRR  L AFK G+VRFLICTDVAARG+DI GLPYV+N+TLPD  E+YIHR+GRVGR + LGLA+S+V+    +EKVWY   C  +G    +  T +D  T  +GG T+WYDEP LL+++EA L+  IA + P  +LP  +A     APG             A YG    GD T  +D   + EHV+ L+PAV ELA LE  AQ+ +L
Sbjct:  401 QVLMFSATLHSDEVKDIASRICQDPSLVDLKGREAVPDTVDHVLVAVDPKADRSW---LQSSPEVPSDNVHALDRTGTSVDTP------ENWSAAIKRLKPRVLQRLIDAYKMEQCLIFCRTNFDCDNLEKFLNSLGGGRGGRWAGRRESGKENPYSCCVLAGARSTDQRRDALQAFKHGEVRFLICTDVAARGIDISGLPYVINLTLPDRAEDYIHRVGRVGRAEKLGLAISLVST--VREKVWY---CSKKGYRPWERPTQKDVETNEQGGHTIWYDEPQLLEDIEARLRQKIASVNPDLSLPKDIAARISAAPGS------------AAYGQHKGGD-TASKD---IMEHVEALKPAVAELARLETLAQSFYL 746          
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: DEAD (box protein 1 n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FBU8_VITBC)

HSP 1 Score: 296 bits (757), Expect = 2.680e-87
Identity = 170/376 (45.21%), Postives = 225/376 (59.84%), Query Frame = 1
Query:   10 FFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDTQEDGGADLAGSAALTKAKARVQAKTDGAAVGPGSEGREEERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGGGKRFTGHQESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRGQGCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGPG-YTLPPGLAGGGAPGEGHGGXXXXXXXPAEY-GAKVRGDATG---------GEDRARMAEHVKRLRPAVQELAGLEFEAQNIWLGL 1104
            FFSATLHSPE+ +  ++I  RPTWVDLKGR ++P TVH V   +DP+             A       V+  TDG        G     ++++K MKPQVL+++ +   M+  ++FCRTN+DCD LE+FL  +GGG+ F G  ESG +N +SC VLAGMR  Q+R+ NL  FK GDVRFLI TDVAARG+DI+ LP++V +TLPD P  + HR+GRVGR D +GLA+SIVA +  KEKVWYHK C NRG+GCTN   + +GGCT+WYDEP  LKE+E  +   IA M P  +++   L   GA    H           E+  A V G A G          ++     +H++ L PAV EL  LE   Q  ++ L
Sbjct:  400 FFSATLHSPEVRQAIESITVRPTWVDLKGRPSIPDTVHFVAYTIDPNK----------GLAFRPVNEAVRPTTDGVHARDPPSG-PLGCSQQIKEMKPQVLVKLADTFKMESCLVFCRTNVDCDNLEKFLNSLGGGRGFAGKAESGKENPYSCVVLAGMRDQQERQRNLAHFKAGDVRFLIATDVAARGIDIRELPFLVMLTLPDDPNQFFHRVGRVGRADRMGLAISIVATE--KEKVWYHK-CPNRGRGCTNTKLVEEGGCTIWYDEPTYLKEIEERVGQRIAAMHPSNFSVKGVLDPLGAEQAHHKDDGRSKRHKKEHVSAPVAGQAGGMLMYGKMKDDQNTKATLKHLQELSPAVGELQQLERVIQQRYVTL 761          
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S3T1_9CHLO)

HSP 1 Score: 286 bits (732), Expect = 4.870e-87
Identity = 177/376 (47.07%), Postives = 220/376 (58.51%), Query Frame = 1
Query:    1 KVCFFSATLHSPEIAKLADTICDRPTWVDLKGRDTVPQTVHHVVVRVDPDTQEDGGADLAGSAALTKAKARVQAKTDGAAVGPGSEGREEERAERLKRMKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGG--GKRFTGHQESGDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGLPYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNCRNRGQ------GCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGPGYTLPPGLAGGGAPGEGHGGXXXXXXXPAEYGAKVRGDATGGEDRARMAEHVKRLRPAVQELAGLEFEAQNIWLGL 1104
            +V  FSATLHSPE+  LA  IC  P  VDLKGR+ VP+ V H VV VDP  +ED    L G   +    A    KT  A   P      E  +E +KR+KP++L R+++   M+QA+IF RTN D D LE FL  +GG  G +F G  ESG + A+SC VL G RSM++RRA L AFKEGDVRFLI TDVAARG+DIK LPYV+NMTLPD  E+YIHR+GRVGR D +GLA+S+VA     EKVWY   C  +G          N  T  +GG T+WYDEP LL+ VE  L   +A +G   +LPPG+A                    E G +  G A GG     +AEH+  +   VQ+L  LE  AQ  +L L
Sbjct:  105 QVLLFSATLHSPEVRALAGQICQDPLLVDLKGREHVPEAVDHAVVVVDP--REDRSW-LQGQPQVWTDGAHALDKTGPAVSTP------ECWSEAVKRLKPRLLQRLIDRYKMEQALIFVRTNHDADNLERFLAALGGNAGAKFRGKAESGKEGAYSCVVLGGARSMEERRAALAAFKEGDVRFLIATDVAARGLDIKELPYVINMTLPDKSEDYIHRVGRVGRADTMGLAISLVA--ALPEKVWY---CTVKGYKPWLEPDAKNTRTQEQGGHTIWYDEPALLQAVEKRLGRDVARLGADLSLPPGMAA-----------------KLEGGGEKYGQARGGGTSKEVAEHLAAIHQNVQQLGSLEVAAQGSFLAL 449          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7668.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.060e-20781.23protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Atp-dependent3.600e-11653.08rna helicase ddx1 n=2 Tax=Monodopsidaceae TaxID=42... [more]
Hypothetical2.410e-10851.14protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Hypothetical7.550e-9554.11protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
DEAD4.480e-8845.27box protein 1 n=1 Tax=Chromera velia CCMP2878 TaxI... [more]
DEAD7.130e-8848.00box protein 1 n=1 Tax=Chlorella sorokiniana TaxID=... [more]
DEAD8.220e-8848.51box protein 1 n=3 Tax=Micromonas pusilla TaxID=388... [more]
ATP-dependent1.140e-8747.34RNA helicase DDX1 n=1 Tax=Coccomyxa sp. Obi TaxID=... [more]
DEAD2.680e-8745.21box protein 1 n=2 Tax=Vitrella brassicaformis TaxI... [more]
Hypothetical4.870e-8747.07protein (Fragment) n=1 Tax=Chlamydomonas leiostrac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7668contigH-canaliculatus_M_contigs7668:243..4401 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog29176.XP_003879798.1
PFAMsDEAD,Helicase_C,SPRY
Model size1740
Max annot lvl5794|Apicomplexa
KEGG koko:K13177
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.91e-70
EggNOG OGsCOG0513@1|root,KOG0349@2759|Eukaryota,3YB70@5794|Apicomplexa,3YKC1@5796|Coccidia,3YQWX@5809|Sarcocystidae
EC3.6.4.13
DescriptionBelongs to the DEAD box helicase family
Cds size828
COG categoryA
BRITEko00000,ko01000,ko03016,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7668.1.1prot_H-canaliculatus_M_contigs7668.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7668 537..3783 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854105.1695719-UTR-H-canaliculatus_M_contigs7668:242..5361696854105.1695719-UTR-H-canaliculatus_M_contigs7668:242..536Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs7668 243..536 +
1696854105.2469614-UTR-H-canaliculatus_M_contigs7668:3783..44011696854105.2469614-UTR-H-canaliculatus_M_contigs7668:3783..4401Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs7668 3784..4401 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854105.1840756-CDS-H-canaliculatus_M_contigs7668:536..5481696854105.1840756-CDS-H-canaliculatus_M_contigs7668:536..548Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7668 537..548 +
1696854105.1947503-CDS-H-canaliculatus_M_contigs7668:1185..12411696854105.1947503-CDS-H-canaliculatus_M_contigs7668:1185..1241Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7668 1186..1241 +
1696854105.2052832-CDS-H-canaliculatus_M_contigs7668:1722..18671696854105.2052832-CDS-H-canaliculatus_M_contigs7668:1722..1867Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7668 1723..1867 +
1696854105.217157-CDS-H-canaliculatus_M_contigs7668:2361..25771696854105.217157-CDS-H-canaliculatus_M_contigs7668:2361..2577Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7668 2362..2577 +
1696854105.2303956-CDS-H-canaliculatus_M_contigs7668:3384..37831696854105.2303956-CDS-H-canaliculatus_M_contigs7668:3384..3783Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7668 3385..3783 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7668.1.1

>prot_H-canaliculatus_M_contigs7668.1.1 ID=prot_H-canaliculatus_M_contigs7668.1.1|Name=mRNA_H-canaliculatus_M_contigs7668.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=276bp
MKPQVLLRVVEALGMDQAIIFCRTNLDCDLLEEFLTDVGGGKRFTGHQES
GDQNAFSCCVLAGMRSMQQRRANLTAFKEGDVRFLICTDVAARGVDIKGL
PYVVNMTLPDVPENYIHRIGRVGRQDCLGLAVSIVACDGCKEKVWYHKNC
RNRGQGCTNRDTLSKGGCTMWYDEPGLLKEVEALLQAPIAEMGPGYTLPP
GLAGGGAPGEGHGGGGAAPAGPAEYGAKVRGDATGGEDRARMAEHVKRLR
PAVQELAGLEFEAQNIWLGLVHGRF*
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mRNA from alignment at H-canaliculatus_M_contigs7668:243..4401+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7668.1.1 ID=mRNA_H-canaliculatus_M_contigs7668.1.1|Name=mRNA_H-canaliculatus_M_contigs7668.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4159bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7668:243..4401+ (Hapterophycus canaliculatus Oshoro7m male)
AAGGTGTGCTTCTTCTCCGCCACCCTCCATTCTCCGGAGATAGCGAAGTT AGCGGACACCATCTGCGACCGCCCCACGTGGGTGGATCTCAAGGGACGAG ACACGGTACCCCAAACGGTGCACCACGTGGTAGTAAGAGTGGACCCAGAT ACGCAAGAGGACGGCGGCGCCGATCTCGCTGGCTCCGCCGCCCTTACCAA GGCGAAGGCGAGGGTCCAGGCGAAAACGGATGGGGCGGCGGTGGGTCCCG GGTCGGAGGGGAGGGAGGAGGAGAGAGCGGAGAGGCTCAAGCGGATGAAG CCGCAGGTGCGTCCGCGCCGAAAATCGTCGTGGTTGTTATGGCGGCCCGT GAACCTGTTCGCTTGCAAGGAGATATCCCTGTAGCGCCCGTGGGGGGGAT AGGTCCGGAGATTAAATCGTGGCGGAAGAAAGTGCTGGCACGGCGCCCGA GGAACGGATTTGACTTGCTGGTCCCTCGATTGAGGGAAAGCCCTTCCTCT ACGAGATGAACGTTGAGTTTTGCATCAGATTCACCGAGGAGCACCAGAGG GTCCCATGCGATGTATTCGCGCTTGGACGCGCTGAATCAGACACAGACGA TCCTCCAAAACACGGGAGGGCTGTGTACTGCTTTATCCCGCCCATTTTTT TCCTATTTTTTATTTTCTTCCTGGTTGCTCCTGTCGTATGCCGTAAACGT GCTGGTGTGCGCGTGACGTGGGTGCAACAGCCGGCTCCGCGGGTAGTGAT TGCTTTTAGAACTTCAGTTTTTTTTTAGTGTGCAACGTTGCGAGGAGTGT CCCCCGTTTTGTCGATGATACTGGTACCACGGCGCTCGAGTCGTGGTGAC GCCATCATAAGCCGAAAAATGCAGTATAAGCCGTTCTGTGTGTCGCTACC TTTGTCGATGGCAATGCCTATACCACCGTCTCTGCTGATGCAGGTCTTGC TCCGTGTGGTCGAGGCTCTGGGGATGGACCAGGCGATTATTTTCTGCAGG TGGGATGTAGTGACGCACAGCGATACGTTATGCTTTCACCGACATGGCTG GTCTGACTTAGTGTCAATCGCTTCGCAGCCGGCACACGAAACACAGATCC GTAGTAGGTTGCCGTGCCCCGTCGAAGTTCCACCGCACTACCCCCCGGCT ACTTGAAGGTCACGCTTACCGTGTAAAAAACGCTTGGGGCGGACGTCAAC GAATCATGCCGTAACAACCGCAGAAGCACAGCTCCTGGTCACGGATAGGA ATGCGATCGAAAAGGATAAAAGAACATTTCAAAGCAAATTCGAAGTCCGT GTGGTGCAGGCGCGCACCCAGCAGGTCGCGCGTCGTCCAAGGGGTTCTGA AACCTTTGACGGCAAGTGCAGCCGCTGACGTTCACTTTGTCGTTGCTATG ACCTCATTCCGAAAAGCTCTGACTATGTAATACCGGTGATTCATGCGTTT CCCTCTTCCTCTCATATTTTTCCTCGGCAGAACCAACCTTGACTGCGATC TCCTGGAGGAGTTCCTCACAGATGTTGGCGGAGGGAAGCGCTTCACCGGC CACCAGGAGAGCGGAGATCAAAACGCGTTCTCATGCTGCGTGCTCGCCGG CATGCGATCCATGCAGCAAAGGCGGGTGAGACACCGCTGTGCGAGGACGG AGAGGGAGAGGGAGGACATGATTGGATGAGTCAACACCCTTCTTTGTCAG AGAGGCTTTTCAGGGATACTGGATTCCTGCGTCTAACCTTTCTGCAGCAA CGGGCAAGGCGGAGTCGTTTCACCGCAGCGATTGCAGGCGCCCTCTTCGG TTGCGACCGCTGACAACACGTGGCGGCGTCACAAAGACACCGCGCACTAC GCGCGGCATGCGCATGTTGGCCGGCGTTTCATGTTTTTTGCAGCCTCTCG CATTGCTCCCCCCGTCGGTGGCGTGCCGATCTCCAGATTGAGAAAATGAT GTCACGCAATGGCTGGGCTTTGTGTTTGTGCGAGGTGTTCTTTTCGTTCT GTAGTTTGCGATCGCGTGACGGAACGATTCTGTGGATGCGATGAACCGGT TCGATTCAACTCTTCTGTATCTTCAGCGTTGGGCGGCAGCCGACAATCTT TCTCGTTATGGATGAACAGGCCAACCTCACTGCCTTCAAGGAGGGCGACG TCCGGTTCCTTATCTGCACCGACGTCGCGGCCCGGGGGGTGGACATCAAG GGGCTACCGTACGTGGTGAACATGACGCTCCCCGATGTGCCCGAGAACTA CATCCACAGGATAGGCCGCGTAGGGCGACAGGACTGCCTCGGCCTGGCGG TGTCCATCGTGGCATGCGACGGCTGTAAGGAGAAGGTAGGCGTGTCGCGA GCTTTGCGAGTACACCCAGAAGAACGTTTTTGGTTCGTTTCTTATTTTTC GTGCATGGTGCTCGAACGCCGCGTGCCAAACACACGGTAACTGCTTGTAA CCGATCGTCTGTCTTGCTCTGGTTCTGTACACCACAATGACGCAAAAAAT TGCACGTGTATCGCACGAAAAACGAACGGAAGACGGAATCAAGCGTCCGC CAATACGGAAGTCTGACTTCTTCACGGCTTTCGGGCCATGCCCCCGTTGG TGTTTAGCTTCTTGTATGCGGAAATGAGGGGTGCCGTGCCATGCCATGCC ACACCGTCACTTGCAAAGCTGTGCCAGGATATTGTTCCGCATGTCGAATA TTCCACGGTCTAGTGAAATAGCTCGACACACCTGTCTTCCAGAACGGGCC CCGATTCTTGTCGCGCTTTTTCCCCGTGTATCCATCCATCTCGAACACGA TGGATGGGAAGCGTGGCAACAGGGTCAACGCGCACGTGGCATCAGCGGTA GATAGTCTTCCCGCCGCAGCCAACTTTGGGATGTCAAGCGTGAAATGCGG CAGCAGTTCACGTGGGAACCGAGAACGTCGATGAAATTGAAGCCTTAGGC ATGCAGCAAGTGATTCTCTTGGAGCCGGGCATTCACATCCATTATTCGCC AGAAACCAGCACCCCCAAGAGCGCTGGGACTTCGGCCGTGTTTCTTTGTG GAAAGCTATCCGGTGTTCGCGGTAACGTAACTCCAAGCATGCAATAGATG AGACGCCCCGCCCCCGTCCCTACCGGGCGTTCCACCGTCCAGGTCTGGTA CCACAAGAACTGTCGAAACCGAGGGCAAGGCTGCACCAACCGTGATACCC TCTCGAAAGGGGGATGCACGATGTGGTACGACGAGCCAGGCCTGCTCAAA GAGGTGGAAGCCCTCCTGCAGGCACCGATCGCCGAGATGGGTCCTGGTTA TACCTTACCCCCGGGTCTCGCAGGCGGCGGGGCTCCTGGTGAGGGTCATG GAGGCGGTGGCGCCGCCCCAGCTGGTCCTGCCGAGTACGGAGCCAAGGTC AGGGGGGACGCGACCGGTGGCGAAGACAGGGCGAGGATGGCTGAGCACGT CAAGCGCTTGAGGCCAGCGGTGCAGGAGTTGGCCGGGCTTGAGTTTGAAG CGCAGAATATCTGGCTTGGGCTAGTGCACGGACGGTTTTGATTGCACCAG TCTTCGCTGTTGGGCACAAGCAGGTTGATACTTCCTCCAAAAGGAAAGTG CTACTTTGGGCGCTGTTGGGCTGGACAAACACGAGCGTGTTGGGTATCTG TGGGAATTTGTCTGATCTATTCCGCGGCGCATGCGTCAATCTATGTTGGT ATCGTGTCGCCCCGCGGGAGCAAGATCTGCAATGCGCATGCAAGAACGTG AAATATCCGCCATGTTTTGGGGAAACATTGCCATGTTTTGGAAAAACGCG CCAGGTACAGTAGACCGCCAAGGAAACCATATTTTGTGCCTGGCACGCGT TGCTCCCCGGAGACTCCGACACGCCGTCACTTTCATCGGCTACCCATGAA AGAAACTGCGACGGCCGTAGTGGCACCACCGCGGTGCAGATCAGGTGTTT TTGTCGTCTAGACTACCTGGCGCCAGCGTCGGATGCAAGGACGCTGAGGA ATTATCGTCGTGTGTGAACTCGACGTTGAAAGAGAGAAGACCTTGAGCAT CTAGGTACGCAAACGCAATTCATCACCTCTCTCCGTGGGATTTAAATCGT GTGAAGGAAAGGCCGGGGGGCGAGGGTGGACGCAAAATAATACTCCGTTT TGTCTTGGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7668:243..4401+

>mRNA_H-canaliculatus_M_contigs7668.1.1 ID=mRNA_H-canaliculatus_M_contigs7668.1.1|Name=mRNA_H-canaliculatus_M_contigs7668.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=828bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7668:243..4401+ (Hapterophycus canaliculatus Oshoro7m male)
ATGAAGCCGCAGGTCTTGCTCCGTGTGGTCGAGGCTCTGGGGATGGACCA
GGCGATTATTTTCTGCAGAACCAACCTTGACTGCGATCTCCTGGAGGAGT
TCCTCACAGATGTTGGCGGAGGGAAGCGCTTCACCGGCCACCAGGAGAGC
GGAGATCAAAACGCGTTCTCATGCTGCGTGCTCGCCGGCATGCGATCCAT
GCAGCAAAGGCGGGCCAACCTCACTGCCTTCAAGGAGGGCGACGTCCGGT
TCCTTATCTGCACCGACGTCGCGGCCCGGGGGGTGGACATCAAGGGGCTA
CCGTACGTGGTGAACATGACGCTCCCCGATGTGCCCGAGAACTACATCCA
CAGGATAGGCCGCGTAGGGCGACAGGACTGCCTCGGCCTGGCGGTGTCCA
TCGTGGCATGCGACGGCTGTAAGGAGAAGGTCTGGTACCACAAGAACTGT
CGAAACCGAGGGCAAGGCTGCACCAACCGTGATACCCTCTCGAAAGGGGG
ATGCACGATGTGGTACGACGAGCCAGGCCTGCTCAAAGAGGTGGAAGCCC
TCCTGCAGGCACCGATCGCCGAGATGGGTCCTGGTTATACCTTACCCCCG
GGTCTCGCAGGCGGCGGGGCTCCTGGTGAGGGTCATGGAGGCGGTGGCGC
CGCCCCAGCTGGTCCTGCCGAGTACGGAGCCAAGGTCAGGGGGGACGCGA
CCGGTGGCGAAGACAGGGCGAGGATGGCTGAGCACGTCAAGCGCTTGAGG
CCAGCGGTGCAGGAGTTGGCCGGGCTTGAGTTTGAAGCGCAGAATATCTG
GCTTGGGCTAGTGCACGGACGGTTTTGA
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