mRNA_H-canaliculatus_M_contigs7665.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7665.1.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ4_9PHAE) HSP 1 Score: 274 bits (701), Expect = 4.650e-77 Identity = 225/541 (41.59%), Postives = 266/541 (49.17%), Query Frame = 1
Query: 1 VAVPAFPGDDGGGGGWEREALRREIKNAACRLLPSWDLRSHGGERAKKMLGSSFPAAVSRLLRGAPAPKPTPT--SSPL--------LHGRRRCPPMPDGVQNALTLDANMRRRHREWDAYQAKRANADRNKRKAEGXXXXXXXXXXXXXXXXXXXXXXXXASERVGGDGCDRDDGVGDGDEEADGTVGLVGSRVPKRRSEAQQRATGTSAGAGAGKDKV--GAREWRMPPTCYVCHLPLASVCECTASSLDVERQFWEQRVAVAAGRPLQIDLGMPEYRDDRIHGAEIK-REEIAQHR-RGAVTHRFRMEHSVAMQNRGLLRHPLAVLPSPXXXXXXXXXXXXXXSGASL-----------IGEGDQQTGTPPATDASGTXXXXXXXXXXXXXXXXXXDDNHDFDHYVSA--AAESDEGSDLYERDEAPGVDQPERGDCTVRSESAASAXXXXXXXXXXXXVSAARRKPASPMSPRLEEWRGFPSPAMAFARAAPVENPKGVLPPSPHVLRFIHQMASAKAEGTPALYGTLDESALIAVG 1542
V +PAFP G G R ALR IK+AA RLLPSWD R+ + + G SF +AV RLLRGAPAP+P P SP H RRRCPPMP Q+ LT A + + H +W + KRA D EG ++E G + G G+ + V A+EWRMPPTCYVCHLPLAS+CECTA SLDVERQFW+ RVAV AGRPL++DLGM EY +DR G + R +A+HR + THR NRGLLR+P V PS SL + +G T +T XXXXXXXXXX D D ++A AAE D+ DL + E+ G AAS V+A + K AS PRLEEW GFP P+ AFARAAP+ENPKG LPPSP VLRFIHQ+ASAKAEGTPALYG LDESALIAVG
Sbjct: 1076 VTIPAFPAAAGDG----RGALRVGIKDAASRLLPSWDRRNTDAPD-QGVSGPSFSSAVLRLLRGAPAPEPAPPLPMSPXXXXXXLSPFHSRRRCPPMPRLTQHILTNRAQILKLHADWRSAAQKRAK-DTGIEAEEGHRRLVAGKGIEASGGGVLEGTV--SAEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGGRWAEEGDERSGGSERVAVVSDAKEWRMPPTCYVCHLPLASMCECTAGSLDVERQFWDHRVAVVAGRPLKVDLGMQEYNEDRFFGDVVPTRGSVAKHRLQTGTTHR----------NRGLLRYPFTVEPSALPAHGPASPGAGVAGAGSLSPPTSCSLPAGVLQGASTDTTTRSTGGQKXXXXXXXXXXXAGTVDCGIGDRRCDDDLLAAEAAAELDDELDLGDLHESAG---------NGNGGGAASNATGSAEATMGAAVAAVKPKLASLSRPRLEEWPGFPCPSKAFARAAPMENPKGGLPPSPQVLRFIHQVASAKAEGTPALYGLLDESALIAVG 1589
BLAST of mRNA_H-canaliculatus_M_contigs7665.1.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP6_ECTSI) HSP 1 Score: 249 bits (637), Expect = 1.380e-68 Identity = 197/536 (36.75%), Postives = 242/536 (45.15%), Query Frame = 1
Query: 1 VAVPAFPGDDGGGGGWEREALRREIKNAACRLLPSWDLRSHGGERAKKMLGSSFPAAVSRLLRGAPAPKP------TPTSSPLL-----HGRRRCPPMPDGVQNALTLDANMRRRHREWDAYQAKRANADRNKRKAEGXXXXXXXXXXXXXXXXXXXXXXXXASERVGGDGCDRDDGVGDGDEEADGTVGL---------------------------VGSRVPKRRSEAQQRATGTSAGAGAGKDKVG----AREWRMPPTCYVCHLPLASVCECTASSLDVERQFWEQRVAVAAGRPLQIDLGMPEYRDDRIHGAEIK-REEIAQHR-RGAVTHRFRMEHSVAMQNRGLLRHPLAVLPSPXXXXXXXXXXXXXXSGASLIGEGDQQTGTPPATDASGTXXXXXXXXXXXXXXXXXXDDNHDFDHYVSAAAESDEGSDLYERDEAPGVDQPERGDCTVRSESAASAXXXXXXXXXXXXVSAARRKPASPMSPRLEEWRGFPSPAMAFARAAPVENPKGVLPPSPHVLRFIHQMAS 1476
V +PAFP G G R LR IK+AA RLLPSWD R + + + G SF +AVSRLLRGAPAP+ + + SP L H RRRCPPMP Q+ LT A + + H +W + RA D + EG V G G D G +GTV + G G + V A+EWRMPPTCYVCHLPL S+CECTA SLDVERQFW+ RVAV AGRPL++DLGM EY +DR G + R +A+HR + THRFRMEH+VAMQNRGLLR+P AV P SL P+ + + +HD +AA D D+ +R +D + + +A +A KPAS PRLEEW GFP P+ AFARAAP+ENPKG LPPS VLRFIHQ+ S
Sbjct: 1239 VTIPAFPAAAAGDG---RGTLRVGIKDAASRLLPSWD-RRNADAPDQGVSGPSFSSAVSRLLRGAPAPEXXXXXXMSRSPSPFLPLSPFHSRRRCPPMPRLTQHILTDRAQILKLHADWRSAAQNRAK-DTGTEEEEGHRRL------------------------VAGKGVDAGGGGA-----LEGTVSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGGRGSEDVAVVSDAKEWRMPPTCYVCHLPLVSMCECTAGSLDVERQFWDHRVAVVAGRPLKVDLGMQEYNEDRFFGDVVPTRGSVARHRLQPGTTHRFRMEHAVAMQNRGLLRYPFAVEPQALPAHGPASPGAGGAGAGSLSPR--------PSCSSPAGVPQDATSDTATKSTREQRERSHDVGGDAAAAGAGD--CDIGDRRCDDELDLRGLRESAKSGNGSRAANNGTGSAEATMGAAAVEPKPASLSRPRLEEWPGFPCPSKAFARAAPMENPKGGLPPSLQVLRFIHQVVS 1730
BLAST of mRNA_H-canaliculatus_M_contigs7665.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU11_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.130e-20 Identity = 62/119 (52.10%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 616 GKDK--VGAREWRMPPTCYVCHLPLASVCECTASSLDVERQFWEQRVAVAAGRPLQIDLGMPEYRDDRIHGAEI--KREEIAQH---RRGAVTHRFRM---EHSVAMQNRGLLRHPLAV 942
GKD+ VG +EWR+PPTCY+CH PLASV QFWEQ +AV AG P QI LGM EY RI E+ KR+ IA+H RRG + EH+V+MQNRGLLR+PL V
Sbjct: 43 GKDERVVGMKEWRVPPTCYICHPPLASV------------QFWEQPMAVVAGWPFQIPLGMLEYDHARIASDEVTPKRDTIAEHHRDRRGNFAAFLSVPPGEHAVSMQNRGLLRYPLWV 149 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7665.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7665.1.1 >prot_H-canaliculatus_M_contigs7665.1.1 ID=prot_H-canaliculatus_M_contigs7665.1.1|Name=mRNA_H-canaliculatus_M_contigs7665.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=514bp VAVPAFPGDDGGGGGWEREALRREIKNAACRLLPSWDLRSHGGERAKKMLback to top mRNA from alignment at H-canaliculatus_M_contigs7665:722..5100+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7665.1.1 ID=mRNA_H-canaliculatus_M_contigs7665.1.1|Name=mRNA_H-canaliculatus_M_contigs7665.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4379bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7665:722..5100+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7665:722..5100+ >mRNA_H-canaliculatus_M_contigs7665.1.1 ID=mRNA_H-canaliculatus_M_contigs7665.1.1|Name=mRNA_H-canaliculatus_M_contigs7665.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1542bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7665:722..5100+ (Hapterophycus canaliculatus Oshoro7m male)back to top |