mRNA_H-canaliculatus_M_contigs766.3.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs766.3.1
Unique NamemRNA_H-canaliculatus_M_contigs766.3.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ61_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 6.610e-114
Identity = 170/191 (89.01%), Postives = 176/191 (92.15%), Query Frame = 1
Query:   43 RRPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAK 615
            RRPSVVGL+GGIASGKST+SK L T CGLEVIDADKLGHESY+PGTRCFGKLVD FG  IVAGDGTIDRR LG AVFGNPSNMA+LQGIVWPEIRLLAE RIEGLG  GAESVVLEAAVLLEAGWD+LCDELWVVQVPPAVAR RLMKRN FDE EADKRIASQPMTN+ERAARATVVLSN GTEEDLVAK
Sbjct:   17 RRPSVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGENIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 207          
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRA4_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 7.890e-112
Identity = 169/194 (87.11%), Postives = 176/194 (90.72%), Query Frame = 1
Query:   43 RRPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKE 624
            RRPSVVGL+GGIASGKST+SK L T CGL VIDADKLGHESY+PGTRCFGKLVD FG KI+AGDGTIDRR LG AVFGNPSNMA+LQGIVWPEIRLLAE RIEGLG  GAESVVLEAAVLLEAGWD+LCDELWVVQVPP VAR RLMKRN FDE EADKRIASQPMTN+ERAARATVVLSN GTEEDLVAK  E
Sbjct:   51 RRPSVVGLIGGIASGKSTVSKALGTACGLAVIDADKLGHESYQPGTRCFGKLVDAFGEKIIAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPEVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAKAGE 244          
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A2A9HEN9_CHLB2)

HSP 1 Score: 199 bits (505), Expect = 1.540e-60
Identity = 108/200 (54.00%), Postives = 137/200 (68.50%), Query Frame = 1
Query:   55 VVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETWASRAGVLR 654
            V+GL GGIASGKST++     E G+ VIDAD LGH +Y PGT  + K+V+TFG  +VA DGTIDR+ LG+ VFG P  + KL  IVWP IR LA +++     AG E VVLEAAVLLEAGW++L DE+WVV V P +A +RL  RN  D   A  RIASQ +TNEER AR  V++ N GT ++L A++++ W S    LR
Sbjct:    3 VIGLTGGIASGKSTVTSFFR-ERGIPVIDADILGHRTYDPGTETYQKVVETFGQDVVAADGTIDRKVLGSKVFGRPEELKKLTDIVWPGIRRLASEQLAEFEAAGNELVVLEAAVLLEAGWEDLVDEIWVVVVDPEIAVQRLAARNGLDPDAARARIASQ-LTNEERIARGDVIIENNGTLDELNARIQQAWDSLQERLR 200          
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1AGZ2_9CHLR)

HSP 1 Score: 194 bits (494), Expect = 8.820e-59
Identity = 103/191 (53.93%), Postives = 132/191 (69.11%), Query Frame = 1
Query:   58 VGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETW 630
            +GL GGIASGKST++  LA + G  +IDAD+LGH +Y+PGT  F ++V  FGA IV  DGTIDR  LG  VFG P  M +L  IVWP I  LA + +     AG E  V+EAAVL EAGW+ L DE+WV+ VPPAVAR+RLM RN F  +EADKRI SQ ++N ER ARA VV+S   + +++ ++V+  W
Sbjct:    4 IGLTGGIASGKSTVTGTLA-DLGATIIDADRLGHRTYEPGTETFAQVVAAFGADIVGEDGTIDRPTLGGKVFGEPGAMTRLTDIVWPGIAALAVEEMAAARAAGVEVAVVEAAVLFEAGWETLVDEVWVISVPPAVARQRLMDRNGFSAEEADKRIGSQ-LSNAEREARADVVISTDCSLDEVRSRVESAW 192          
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ82_9STRA)

HSP 1 Score: 194 bits (494), Expect = 2.760e-58
Identity = 103/206 (50.00%), Postives = 137/206 (66.50%), Query Frame = 1
Query:   46 RPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETWASRAGVLRNRR 663
            RP V+G+ GGIASGKS ++++     G+ V+DAD LGH SY  GT C+ +L+ TFG +IV  DG I+RR LG  VF +P    +L+GIVWPEIR L E+ +  LGE G  + V+EAAV+LEAGW++  DE+WVV   P VA+ RLM RN    ++A +RI +Q MTN+ER  +A  V+ N GT  DL  +V+  W  R G LR RR
Sbjct:   17 RPLVIGVTGGIASGKSMVTRLCQGRYGVSVLDADILGHRSYAKGTPCYRQLLKTFGEEIVGEDGQINRRALGRIVFSSPQERNRLEGIVWPEIRRLMEEDLRALGETGIHAAVVEAAVMLEAGWEDAMDEVWVVAAEPEVAKTRLMSRNNLSAEDALRRIEAQ-MTNQERIEKADRVIWNNGTVADLEKEVERAWEER-GTLRRRR 220          
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E5LXA9_9CHLR)

HSP 1 Score: 193 bits (491), Expect = 4.660e-58
Identity = 105/200 (52.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query:   31 WRGSRRPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETW 630
            W GS R   +GL GGIASGKST+++    E G+ VIDAD LGH +Y PGT  F  +VD FG+ IVA DG+IDRR LG  VFG P  + +L  IVWP IR LA Q +  L  AG +  +LEAAVLLEAGW ++ DE+WV  V   +A  RL +RN  DE  A  RI SQ ++NEER A A+VV+ N GT E+L  ++K  W
Sbjct:   21 WIGSERVHTIGLTGGIASGKSTVAEFFR-EQGVPVIDADILGHRTYDPGTSTFADVVDAFGSDIVAADGSIDRRALGGKVFGKPEELTRLTDIVWPGIRALASQELSDLEVAGTKIALLEAAVLLEAGWQDMVDEVWVTTVEVDIAVARLAERNGLDETAARARIDSQ-LSNEERIAIASVVIENNGTREELADRIKAVW 218          
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2YSE9_9GAMM)

HSP 1 Score: 190 bits (482), Expect = 3.460e-57
Identity = 98/196 (50.00%), Postives = 143/196 (72.96%), Query Frame = 1
Query:   52 SVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLG-EAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETWAS 636
            +++GL GGIASGKST++++     G  VIDADKLGH +Y+PGTR F  +V+ FG +I+A DG+IDR+ LG+ VFG+   + +L GIVWPEIR +AE+ I     E    +VVLEAAVLLEAGW+++ DE+WVV + P VA ER MKR+  + +  + R+A+Q ++N ER A+A V++ N+G+EE+L+A++ + W S
Sbjct:    2 TIIGLTGGIASGKSTVAEITGQR-GAYVIDADKLGHAAYEPGTRAFSAVVEEFGDEILAEDGSIDRKVLGSKVFGSEGGLDRLTGIVWPEIRAMAEEEISTQKIEDPNRTVVLEAAVLLEAGWEDVVDEVWVVVIDPEVAIERAMKRDGVEREAIEARLAAQ-LSNAEREAKADVIIDNSGSEEELLAEIDKKWRS 195          
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7V1VZL7_9CHLR)

HSP 1 Score: 188 bits (478), Expect = 1.440e-56
Identity = 102/193 (52.85%), Postives = 133/193 (68.91%), Query Frame = 1
Query:   55 VVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETWA 633
            V+GL GGIA+GKSTI+ +LA E G  VIDADK+GHE+Y+ GT  +  LV+ FG +I+  DG IDRR LGA VF +P+    LQ IVWP ++ +  QR+  L  AGA   V+EAAVL+EA W +L DE+WVVQVP AVA +RLM RN   E EA  R+ +Q ++N ERAA A V++ N GT  +  A+V+  WA
Sbjct:    3 VIGLTGGIAAGKSTIAHILA-ELGAVVIDADKVGHEAYRRGTEAWRALVEHFGERILGPDGEIDRRTLGAIVFADPAERQALQAIVWPRMKEMIRQRLAELRAAGARVAVIEAAVLIEASWTDLVDEVWVVQVPEAVALQRLMARNNLTEDEARARLRAQ-LSNAERAAHADVIIDNRGTVAEARAQVERAWA 193          
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=3 Tax=root TaxID=1 RepID=A0A2E7LGZ1_9GAMM)

HSP 1 Score: 188 bits (478), Expect = 2.770e-56
Identity = 105/199 (52.76%), Postives = 134/199 (67.34%), Query Frame = 1
Query:   37 GSRRPSVVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESV-VLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETW 630
            GS R  VVGL GGIASGKST + +L  E G  +IDAD LGH+ Y PGT  F  +V TFG  IVA DGTIDRR LG+ VFGN   + +L  IVWPEIR LAE  I  +G+    +V VLEAAVLLEAGWD + DE+WVV V P +A ER M+R+  D +  + RI SQ ++N+ER A+A +V+ N+  +  LV+++   W
Sbjct:   17 GSTRLRVVGLTGGIASGKSTAATLLG-ELGAHIIDADVLGHQVYNPGTSAFQTVVKTFGEDIVADDGTIDRRALGSKVFGNGDALTRLTDIVWPEIRRLAELEIRKIGDENPNAVIVLEAAVLLEAGWDNIADEIWVVVVDPEIAIERAMQRDGADREAIEARINSQ-LSNDERTAKAHLVIDNSKDQATLVSQINAAW 213          
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Match: Dephospho-CoA (kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6G1SRY1_9CHLR)

HSP 1 Score: 187 bits (476), Expect = 3.700e-56
Identity = 105/192 (54.69%), Postives = 131/192 (68.23%), Query Frame = 1
Query:   55 VVGLVGGIASGKSTISKVLATECGLEVIDADKLGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKLQGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQVPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEEDLVAKVKETW 630
            V+GL GGIASGKST ++ LA E G  VIDAD+LGH  Y+PGT  F K+V+ FG  IVA DGTIDRR LG  VFG P  M +L  I WPEI+ LA Q I+   + G + +VLEAAVLLEAGW++L DE+WVV    A A ERL  RN   E  A  RI+SQ M+N+ER+ RA V + N+G+ +DL  +V+  W
Sbjct:    3 VIGLTGGIASGKSTAAQYLA-ESGAHVIDADRLGHRVYEPGTPGFQKVVNAFGHDIVAKDGTIDRRILGGKVFGAPEQMERLNEIAWPEIKKLAAQEIKDAKQRGDDVIVLEAAVLLEAGWEDLVDEVWVVTTKVATAVERLRTRNGLSEDAAMARISSQ-MSNKERSDRADVKIENSGSVDDLQRRVQRHW 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs766.3.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.610e-11489.01protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.890e-11287.11protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Dephospho-CoA1.540e-6054.00kinase n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A2... [more]
Dephospho-CoA8.820e-5953.93kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724... [more]
Uncharacterized2.760e-5850.00protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Dephospho-CoA4.660e-5852.50kinase n=1 Tax=Dehalococcoidia bacterium TaxID=202... [more]
Dephospho-CoA3.460e-5750.00kinase n=1 Tax=Gammaproteobacteria bacterium TaxID... [more]
Dephospho-CoA1.440e-5652.85kinase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7... [more]
Dephospho-CoA2.770e-5652.76kinase n=3 Tax=root TaxID=1 RepID=A0A2E7LGZ1_9GAMM[more]
Dephospho-CoA3.700e-5654.69kinase n=1 Tax=Dehalococcoidia bacterium TaxID=202... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs766contigH-canaliculatus_M_contigs766:7846..10199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJ61
Preferred nameCOASY
PFAMsCTP_transf_like,CoaE
Model size768
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K00859,ko:K02318
KEGG ReactionR00130,R03035
KEGG Pathwayko00770,ko01100,map00770,map01100
KEGG ModuleM00120
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001667,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004140,GO:0004595,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005759,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006928,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007300,GO:0007303,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010631,GO:0015936,GO:0015937,GO:0016020,GO:0016301,GO:0016310,GO:0016477,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019867,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030707,GO:0030855,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046390,GO:0046483,GO:0046907,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090130,GO:0090132,GO:0090407,GO:0098588,GO:0098805,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons4
Evalue1.08e-114
EggNOG OGsCOG0237@1|root,KOG3220@2759|Eukaryota
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-02_004890.1
EC2.7.1.24,2.7.7.3
Descriptiondephospho-CoA kinase activity
Cds size768
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854104.3375807-CDS-H-canaliculatus_M_contigs766:7845..79981696854104.3375807-CDS-H-canaliculatus_M_contigs766:7845..7998Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs766 7846..7998 -
1696854104.3542848-CDS-H-canaliculatus_M_contigs766:8342..84871696854104.3542848-CDS-H-canaliculatus_M_contigs766:8342..8487Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs766 8343..8487 -
1696854104.3692324-CDS-H-canaliculatus_M_contigs766:9225..94281696854104.3692324-CDS-H-canaliculatus_M_contigs766:9225..9428Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs766 9226..9428 -
1696854104.3804405-CDS-H-canaliculatus_M_contigs766:9932..101991696854104.3804405-CDS-H-canaliculatus_M_contigs766:9932..10199Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs766 9933..10199 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs766.3.1prot_H-canaliculatus_M_contigs766.3.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs766 7846..10199 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs766.3.1

>prot_H-canaliculatus_M_contigs766.3.1 ID=prot_H-canaliculatus_M_contigs766.3.1|Name=mRNA_H-canaliculatus_M_contigs766.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=256bp
MKLGGGGGVLWRGSRRPSVVGLVGGIASGKSTISKVLATECGLEVIDADK
LGHESYKPGTRCFGKLVDTFGAKIVAGDGTIDRRELGAAVFGNPSNMAKL
QGIVWPEIRLLAEQRIEGLGEAGAESVVLEAAVLLEAGWDELCDELWVVQ
VPPAVARERLMKRNAFDEQEADKRIASQPMTNEERAARATVVLSNAGTEE
DLVAKVKETWASRAGVLRNRRRRRRSMAFLGMAAIAAAAVVAAASLVVRR
GREFR*
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mRNA from alignment at H-canaliculatus_M_contigs766:7846..10199-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs766.3.1 ID=mRNA_H-canaliculatus_M_contigs766.3.1|Name=mRNA_H-canaliculatus_M_contigs766.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2354bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs766:7846..10199- (Hapterophycus canaliculatus Oshoro7m male)
ATGAAGCTCGGTGGAGGAGGAGGAGTGCTGTGGCGTGGCAGTCGACGCCC ATCTGTCGTAGGGCTCGTCGGAGGCATTGCCTCTGGCAAGAGCACTATTT CGAAGGTGCTGGCCACGGAGTGCGGGCTGGAGGTGATCGACGCGGATAAG CTTGGCCACGAGAGCTACAAGCCGGGCACGCGCTGCTTCGGCAAGCTGGT GGACACCTTCGGCGCCAAGATTGTGGCCGGGGATGGCACGATCGACCGAC GAGAACTTGGAGCAGCGGTACGGTCTGTCGCGGGTTGCAGCCGCACACCG CAGCAGTTTCCCCTGAGTGCGATGTCCCTCGTTGCTGCCATGTGATATTC GTGTAGCCCCACGAATCTTAGTCTGGGCTTCAGCTCACTAAATCGTTGCG TGTCAGAAATATTGGGGATGTCGCCTACTTTATCCTTTTCCCTCTACGTG TACTGCGGGATATCTGATACCATCCTCCATCCGCAAGGCAGCGTGAGCTT GGTTCCCAACAGCCGCAGCCCATGACCGCGCTTTTTACCATGCAGCCTCT TTGCGGGTTTGTGTTTCGAGGAGTGGTAAGCTACAGCACCAAACATACCA CCAGTGAAGTCTCTGCCGCCTCAACAGAGCATAACGCATCGCCAAGCCAT TGTTCCTGGTCGTACTTGCATCGTCGCTCCAGGAGTAATAGGTACTCCTG AGCTAAGTTGCAGTCGCATCATCGCCAACACCGTGATCGAAAACATCAAC CACAACATCATCATCCAACAGGTGTTCGGGAACCCCTCCAACATGGCCAA GCTGCAAGGTATCGTCTGGCCAGAGATACGCCTCTTGGCAGAGCAGAGGA TCGAGGGTCTCGGCGAGGCCGGTGCAGAGTCCGTGGTTCTCGAGGCGGCC GTACTGCTGGAGGCCGGGTGGGACGAGCTGTGTGACGAGCTGTGGGTTGT GCAGGTGCCCCCGGCCGTGGCGCGGTGAGTCCATCCATGAAAAATAGTCA GCGAAACATCAGAAGTCTCCTCTCAGGGATATGTGACACTTAGGGGGGCG GCGGGGGAGGTGCATCAGTGAATATGTTGCGGTGAGGGTTCAGTACGCCG CCCGGGACAGGGAACCCCTGAATGGAAGGGTCTTGCAAGCTTTCAAGATA GTATTTGCAGGGGCTCAGGCGCAAGTTAGCGAAATAGGCACCGACCGGCC CAAGTTAACCCCAACCCTAATCCGTAACCGTACTCGTACCCGAACCCGTC TAGACCCTGACTTGGTGGCCGAACCGGTGGCCTGTTCTGTCAGCACCAAA GGCGTACCTAAAGCTACGCATTACTTGGCACGTCGCCGTGAAAAAGATGC GCGATGGGTTGTGTGGGTGTCCCCCTGTACGTTTTTTGTTGCGAGTGCAT TTTGGAGCTGCCCCCGGCACACAAGCATCGATAGGAAAAAAGAGAAACGT TCCGAGAAGATCTTCCCGCGTGAGTCTCCAGCGACTTGAGTAGCGAAAAT CGTGTTGGCTTTTTATTAATTTCCGACGTTGATGCTGTTCTGGGCTTTCC TTCGAAGTGTACCGCACCTGAACCCGCACCGCAAAGCGTCAGCGGCACTT ACACCCAGCGCGTTAAACTGTAGCATCTTCACCAGTGTCCTTTTCTCACG CCGTCCACGTATACTTTTCAACGATGTGGCCACTCCCCACGCGCAAACGA ACACGTCCACAGGGAGCGTCTCATGAAGCGAAACGCTTTCGACGAGCAGG AGGCCGACAAGAGGATAGCCTCGCAGCCCATGACGAACGAAGAGAGAGCC GCCCGCGCGACCGTCGTCCTCTCCAACGCGGGCACGGAAGAAGACTTAGT GGCGAAGGTCAGCTCTCTATGTCCTTTCACTGTCATTCTCTTGCTCGAGA AAAGGACGGGTTGCACTGGGGTATGGTTTTGTGGGGAGGCGGGTGGCGGG CATTCCAATTTCTTGCTCGATTTTGTCCTTTTGGGTAGTTGGGCGTACAT CCCTCTTGGAGACTGGCCGAGCGGTCCTTTTTTTTTGTTACACGCGTGTG TGTTTGCGCATTTGCCTGAGGACGCAACCTCTCGGAACCCCGAAGAATGT AACTCGTTCACACCGGACTCGGTTGTCCACCAGTTACGATAAGGTTTGGC TGCGCGTTTCATCCATACTCACAGCGACTTCTTGCCACTTGTTTTACGTA GGTGAAGGAGACGTGGGCTTCAAGGGCCGGGGTGCTTCGGAACCGAAGGC GTCGACGGCGGTCGATGGCTTTTTTGGGTATGGCGGCCATCGCGGCGGCC GCAGTGGTAGCCGCGGCGTCCTTGGTCGTTCGACGCGGCAGGGAGTTCAG ATGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs766:7846..10199-

>mRNA_H-canaliculatus_M_contigs766.3.1 ID=mRNA_H-canaliculatus_M_contigs766.3.1|Name=mRNA_H-canaliculatus_M_contigs766.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=768bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs766:7846..10199- (Hapterophycus canaliculatus Oshoro7m male)
ATGAAGCTCGGTGGAGGAGGAGGAGTGCTGTGGCGTGGCAGTCGACGCCC
ATCTGTCGTAGGGCTCGTCGGAGGCATTGCCTCTGGCAAGAGCACTATTT
CGAAGGTGCTGGCCACGGAGTGCGGGCTGGAGGTGATCGACGCGGATAAG
CTTGGCCACGAGAGCTACAAGCCGGGCACGCGCTGCTTCGGCAAGCTGGT
GGACACCTTCGGCGCCAAGATTGTGGCCGGGGATGGCACGATCGACCGAC
GAGAACTTGGAGCAGCGGTGTTCGGGAACCCCTCCAACATGGCCAAGCTG
CAAGGTATCGTCTGGCCAGAGATACGCCTCTTGGCAGAGCAGAGGATCGA
GGGTCTCGGCGAGGCCGGTGCAGAGTCCGTGGTTCTCGAGGCGGCCGTAC
TGCTGGAGGCCGGGTGGGACGAGCTGTGTGACGAGCTGTGGGTTGTGCAG
GTGCCCCCGGCCGTGGCGCGGGAGCGTCTCATGAAGCGAAACGCTTTCGA
CGAGCAGGAGGCCGACAAGAGGATAGCCTCGCAGCCCATGACGAACGAAG
AGAGAGCCGCCCGCGCGACCGTCGTCCTCTCCAACGCGGGCACGGAAGAA
GACTTAGTGGCGAAGGTGAAGGAGACGTGGGCTTCAAGGGCCGGGGTGCT
TCGGAACCGAAGGCGTCGACGGCGGTCGATGGCTTTTTTGGGTATGGCGG
CCATCGCGGCGGCCGCAGTGGTAGCCGCGGCGTCCTTGGTCGTTCGACGC
GGCAGGGAGTTCAGATGA
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