mRNA_H-canaliculatus_M_contigs76512.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs76512.1.1
Unique NamemRNA_H-canaliculatus_M_contigs76512.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: Ascorbate (peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G488_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 4.360e-19
Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKKVN 156
            SYF T+PD+ CD ELLKLATDKCLF D GFLP AQKY+ SQ AFF DYKK +
Sbjct:  188 SYFATVPDEGCDSELLKLATDKCLFVDEGFLPLAQKYKASQEAFFEDYKKAH 239
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BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: L-ascorbate (peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G168_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.200e-17
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKKVN 156
            SY+ T+PD++ DPELLKL TDK LF D GFLPFAQKYRDS+ AFF DYKK +
Sbjct:  309 SYYATVPDEASDPELLKLGTDKSLFDDEGFLPFAQKYRDSEEAFFEDYKKAH 360
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BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: Chloroplast (thylakoid bound ascorbate peroxidase (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=Q15GE7_GUITH)

HSP 1 Score: 78.2 bits (191), Expect = 7.100e-16
Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKKVNA 159
            SYFTTIPD + DPELLKL +D+ LF DPGF PFA+K+RDS  AFF  Y K +A
Sbjct:  259 SYFTTIPDPNADPELLKLTSDRTLFEDPGFKPFAEKFRDSNEAFFQSYAKAHA 311
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BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G386_PHATC)

HSP 1 Score: 78.2 bits (191), Expect = 8.260e-16
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKKVN 156
            SYFTTIPD+S DPELLKL+TDK LF D  F PFA+K+RDSQ  FFA Y K +
Sbjct:  266 SYFTTIPDESADPELLKLSTDKTLFGDEDFKPFAEKFRDSQDEFFASYAKAH 317
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BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: Ascorbate (peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA8_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 8.630e-16
Identity = 35/52 (67.31%), Postives = 39/52 (75.00%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKKVN 156
            SYF T+PD     EL KL TDKCLF D GFLPFAQKY++SQ AFF DYKK +
Sbjct:  230 SYFATVPDGEGGSELFKLETDKCLFVDKGFLPFAQKYKESQEAFFEDYKKAH 281
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BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QCR3_9CRYP)

HSP 1 Score: 77.0 bits (188), Expect = 2.200e-15
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKKVNA 159
            SYFTTIPD + DPELLKL+TD+ LF+D GF PFA+KY+ S+ AFF DY + +A
Sbjct:  239 SYFTTIPDTNADPELLKLSTDRILFSDEGFRPFAEKYKASEPAFFGDYAQAHA 291
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BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EZC2_9CRYP)

HSP 1 Score: 76.3 bits (186), Expect = 6.810e-15
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKKVN 156
            SYFTTIPD   DPELLKL +D+ LF DPGF PFA+K+RDS  AFF  Y K +
Sbjct:  293 SYFTTIPDPKADPELLKLTSDRTLFEDPGFKPFAEKFRDSNEAFFESYAKAH 344
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: Ascorbate (peroxidase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G384_PHATC)

HSP 1 Score: 73.9 bits (180), Expect = 1.570e-14
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKKVN 156
            SY+  IPD+S DPELLKL+TDK +F D GF PFA+K+RDSQ AFF  Y K +
Sbjct:  192 SYYKVIPDESADPELLKLSTDKVVFMDDGFRPFAEKFRDSQDAFFESYAKAH 243
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BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MY41_HEMAN)

HSP 1 Score: 73.9 bits (180), Expect = 3.660e-14
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADY 144
            SYFTTIPDDS DPELLKL++DK +F D GF PFA+KY+ S++ FF DY
Sbjct:  305 SYFTTIPDDSSDPELLKLSSDKIVFKDDGFKPFAEKYQKSESDFFKDY 352
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BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Match: L-ascorbate (peroxidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZI9_FISSO)

HSP 1 Score: 73.6 bits (179), Expect = 4.140e-14
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 1 
Query:    1 SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKKVN 156
            SYFTT+ D   DPELLKL+TDK LF D GF PFA+K+RDSQ AFF  Y K +
Sbjct:  267 SYFTTMADSKADPELLKLSTDKTLFDDDGFKPFAEKFRDSQDAFFESYAKAH 318
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76512.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Ascorbate4.360e-1973.08peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
L-ascorbate1.200e-1771.15peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
Chloroplast7.100e-1666.04thylakoid bound ascorbate peroxidase (Fragment) n=... [more]
Predicted8.260e-1669.23protein n=1 Tax=Phaeodactylum tricornutum (strain ... [more]
Ascorbate8.630e-1667.31peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
Hypothetical2.200e-1564.15protein n=1 Tax=Cryptomonas curvata TaxID=233186 R... [more]
Hypothetical6.810e-1565.38protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S... [more]
Ascorbate1.570e-1463.46peroxidase n=2 Tax=Phaeodactylum tricornutum TaxID... [more]
Hypothetical3.660e-1468.75protein n=1 Tax=Hemiselmis andersenii TaxID=464988... [more]
L-ascorbate4.140e-1465.38peroxidase n=2 Tax=Fistulifera solaris TaxID=15195... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76512contigH-canaliculatus_M_contigs76512:365..523 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G168
Preferred nameAPX7
PFAMsperoxidase
Model size159
Max annot lvl2759|Eukaryota
KEGG rclassRC00092
KEGG koko:K00434
KEGG ReactionR00644
KEGG Pathwayko00053,ko00480,map00053,map00480
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000302,GO:0003674,GO:0003824,GO:0004130,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009409,GO:0009507,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009631,GO:0009636,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0010019,GO:0010033,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0023052,GO:0031976,GO:0031984,GO:0033554,GO:0034357,GO:0034599,GO:0042221,GO:0042651,GO:0042737,GO:0042743,GO:0042744,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055035,GO:0055114,GO:0065007,GO:0070887,GO:0071588,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748
Exons1
Evalue1.97e-18
EggNOG OGsCOG0685@1|root,2QS7Q@2759|Eukaryota
EC1.11.1.11
DescriptionBelongs to the peroxidase family
Cds size159
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854103.8495624-CDS-H-canaliculatus_M_contigs76512:364..5231696854103.8495624-CDS-H-canaliculatus_M_contigs76512:364..523Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs76512 365..523 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76512.1.1prot_H-canaliculatus_M_contigs76512.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs76512 365..523 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs76512.1.1

>prot_H-canaliculatus_M_contigs76512.1.1 ID=prot_H-canaliculatus_M_contigs76512.1.1|Name=mRNA_H-canaliculatus_M_contigs76512.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=53bp
SYFTTIPDDSCDPELLKLATDKCLFADPGFLPFAQKYRDSQAAFFADYKK
VNA
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mRNA from alignment at H-canaliculatus_M_contigs76512:365..523-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs76512.1.1 ID=mRNA_H-canaliculatus_M_contigs76512.1.1|Name=mRNA_H-canaliculatus_M_contigs76512.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=159bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76512:365..523- (Hapterophycus canaliculatus Oshoro7m male)
AGCTACTTCACCACAATCCCTGACGACTCGTGCGACCCTGAGCTCCTCAA
GCTGGCCACGGACAAGTGCCTGTTCGCCGACCCAGGGTTCCTCCCCTTCG
CCCAGAAGTACCGAGACAGCCAGGCCGCTTTCTTCGCGGACTACAAGAAG
GTGAACGCT
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76512:365..523-

>mRNA_H-canaliculatus_M_contigs76512.1.1 ID=mRNA_H-canaliculatus_M_contigs76512.1.1|Name=mRNA_H-canaliculatus_M_contigs76512.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=159bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76512:365..523- (Hapterophycus canaliculatus Oshoro7m male)
AGCTACTTCACCACAATCCCTGACGACTCGTGCGACCCTGAGCTCCTCAA
GCTGGCCACGGACAAGTGCCTGTTCGCCGACCCAGGGTTCCTCCCCTTCG
CCCAGAAGTACCGAGACAGCCAGGCCGCTTTCTTCGCGGACTACAAGAAG
GTGAACGCT
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