mRNA_H-canaliculatus_M_contigs7642.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (endopeptidase complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK43_ECTSI) HSP 1 Score: 315 bits (808), Expect = 6.030e-107 Identity = 154/156 (98.72%), Postives = 156/156 (100.00%), Query Frame = 1
Query: 1 MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEKAAIAAARAGAEEK 468
+QCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEKAAIAA+RAGAEEK
Sbjct: 129 IQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEKAAIAASRAGAEEK 284
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (endopeptidase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I2_9STRA) HSP 1 Score: 251 bits (642), Expect = 7.640e-82 Identity = 120/142 (84.51%), Postives = 131/142 (92.25%), Query Frame = 1
Query: 4 QCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEK 429
QCRMYELRNKERISVAAASKLL+NTM QYRGYGLSMGTMVAGWDKTGPQLYY DDD TRLH ++FSVGSGSTYAYGVLDT+YK+DMTDEEAI+LG+RAIYHATHRDAYSG INNVY+VKPTGW+KV A DV ++H K A EK
Sbjct: 133 QCRMYELRNKERISVAAASKLLANTMLQYRGYGLSMGTMVAGWDKTGPQLYYVDDDATRLHSHMFSVGSGSTYAYGVLDTYYKHDMTDEEAIDLGQRAIYHATHRDAYSGGINNVYLVKPTGWIKVAAVDVMELHDKYAAEK 274
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D216_9STRA) HSP 1 Score: 247 bits (631), Expect = 6.120e-80 Identity = 120/152 (78.95%), Postives = 134/152 (88.16%), Query Frame = 1
Query: 1 MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEKAAIAAARAG 456
MQCR+YELRNKERISVAAASKLL+NTM QYRGYGLSMGTMV GWDKTGPQLYYCD+D TRLHG+LFSVGSGSTYAYGVLD++++ D+T +EAI+LGKRAIYHATHRDAYSG I NVY +K TGWVKV A DVND+HY A+EKAA A G
Sbjct: 135 MQCRLYELRNKERISVAAASKLLANTMYQYRGYGLSMGTMVTGWDKTGPQLYYCDNDATRLHGDLFSVGSGSTYAYGVLDSNHRADLTVDEAIDLGKRAIYHATHRDAYSGGICNVYHMKETGWVKVGAWDVNDLHYLYADEKAAAAGGAGG 286
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (endopeptidase complex n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H536_HETAK) HSP 1 Score: 243 bits (621), Expect = 1.380e-78 Identity = 117/145 (80.69%), Postives = 129/145 (88.97%), Query Frame = 1
Query: 1 MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEKAA 435
MQCR+YELRNKERISVAAASKLL+NTM+ YRGYGLSMGTMV GWD TGPQLYY DDDG+RL NLFSVGSGSTYAYGVLD+ Y++DMT EEAIELGK+AIYHA HRDA SGSINN+Y VK TGWVK+H+ D NDMHY+ AE KAA
Sbjct: 130 MQCRLYELRNKERISVAAASKLLANTMNSYRGYGLSMGTMVTGWDHTGPQLYYVDDDGSRLANNLFSVGSGSTYAYGVLDSEYRWDMTVEEAIELGKKAIYHAAHRDAMSGSINNLYHVKETGWVKIHSIDTNDMHYEYAEAKAA 274
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (endopeptidase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R777_9STRA) HSP 1 Score: 238 bits (608), Expect = 2.520e-77 Identity = 118/156 (75.64%), Postives = 133/156 (85.26%), Query Frame = 1
Query: 1 MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEKAAIAAARAGAEEK 468
MQCR+YELRNKERISVAAASKLL+NTM QYRGYGLSMGTMV GWD+TGPQLYY D+D TRLHGNLFSVGSGSTYAYGVLD+ Y+YD+T EEAI+LGKRAIYHATHRDAYSG N+Y V+ GWVK+ + DVN++HY A+EK A A AEEK
Sbjct: 75 MQCRLYELRNKERISVAAASKLLANTMFQYRGYGLSMGTMVTGWDRTGPQLYYVDNDATRLHGNLFSVGSGSTYAYGVLDSRYRYDLTVEEAIDLGKRAIYHATHRDAYSGGTCNLYHVQENGWVKIGSWDVNELHYLYADEKENAAGA---AEEK 227
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (endopeptidase complex n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2X1_THAPS) HSP 1 Score: 240 bits (612), Expect = 2.650e-77 Identity = 113/143 (79.02%), Postives = 127/143 (88.81%), Query Frame = 1
Query: 1 MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEK 429
MQCR+YELRNK+RI+VA+ASKLL+NTMS YRGYGLSMGTM+ GWD+TGPQLYY DDDGTRLHG FSVGSGSTYAYGVLDT+Y+ D+T EEAI+LGKRAIYHA HRDA SGSINN+Y V GWVK+HA DVNDMHY+ EEK
Sbjct: 127 MQCRLYELRNKKRITVASASKLLANTMSSYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSGSINNLYHVTKDGWVKIHAIDVNDMHYEFLEEK 269
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (endopeptidase complex n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XUA7_9STRA) HSP 1 Score: 240 bits (613), Expect = 3.500e-77 Identity = 113/150 (75.33%), Postives = 132/150 (88.00%), Query Frame = 1
Query: 1 MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEKAAIAAAR 450
MQCR+YELRN++RI+VAAASKLL+NTM+ Y+GYGLSMGTMV GWD+TGPQLYY DDDG RL GN+FSVGSGSTYAYGVLDT+Y+ DMT EEAI+LG+RAIYHATHRDAYSG +NN+Y V GW K+H+ DVNDMHY+ AE+K IA AR
Sbjct: 144 MQCRLYELRNRKRITVAAASKLLANTMNSYKGYGLSMGTMVTGWDETGPQLYYIDDDGPRLKGNMFSVGSGSTYAYGVLDTYYRNDMTVEEAIDLGRRAIYHATHRDAYSGGLNNLYHVTKEGWKKIHSIDVNDMHYEFAEDKERIAEAR 293
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (endopeptidase complex n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RND0_THAOC) HSP 1 Score: 238 bits (608), Expect = 4.370e-77 Identity = 113/143 (79.02%), Postives = 125/143 (87.41%), Query Frame = 1
Query: 1 MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEK 429
+QCRMYELRNK+RISVAAASKLL+NTM YRGYGLSMGTM+ GWD+TGPQLYY DDDGTRLHG FSVGSGSTYAYGVLDT+Y+ D+T EEAI+LGKRAIYHA HRDA SGSINN+Y V GWVK+HA D NDMHY+ EEK
Sbjct: 99 IQCRMYELRNKKRISVAAASKLLANTMRSYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSGSINNLYHVTKDGWVKIHAIDTNDMHYQFMEEK 241
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (subunit beta type-5 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWW3_9STRA) HSP 1 Score: 236 bits (602), Expect = 8.190e-77 Identity = 113/147 (76.87%), Postives = 128/147 (87.07%), Query Frame = 1
Query: 1 MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEKAAIA 441
MQCR+YELRNKERISVAAASKLL+NT QYRGYGLSMGTM+ GWD+ GPQL+Y DDDGTRL G+LFSVGSGSTYAYGVLD+ +YDMT EEAIELG+RAIYHATHRDAYSG +NN+Y +K TGW + A DVND+HYK AE+KA A
Sbjct: 51 MQCRLYELRNKERISVAAASKLLANTTRQYRGYGLSMGTMICGWDRKGPQLFYVDDDGTRLEGDLFSVGSGSTYAYGVLDSGLRYDMTPEEAIELGRRAIYHATHRDAYSGGLNNLYWMKETGWEFMGAVDVNDLHYKYAEDKAKAA 197
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Match: Proteasome (endopeptidase complex n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBP1_TRICV) HSP 1 Score: 236 bits (603), Expect = 1.310e-76 Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 1
Query: 1 MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEK 429
+QCRMYELRN++RI+VAAASKLL+NTM+ YRGYGLSMGTMVAGWD+TGPQLYY DDDGTRL G +SVGSGSTYAYGVLDT Y+ D+T EEAI+LGKRAIYHATHRDAYSG INN+Y V GWVK+H+ DVNDMHY+ EEK
Sbjct: 80 VQCRMYELRNRKRITVAAASKLLANTMNSYRGYGLSMGTMVAGWDETGPQLYYVDDDGTRLKGKYYSVGSGSTYAYGVLDTLYRPDLTVEEAIDLGKRAIYHATHRDAYSGGINNLYHVTKEGWVKIHSIDVNDMHYEFIEEK 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7642.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7642.2.1 >prot_H-canaliculatus_M_contigs7642.2.1 ID=prot_H-canaliculatus_M_contigs7642.2.1|Name=mRNA_H-canaliculatus_M_contigs7642.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=162bp MQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQback to top mRNA from alignment at H-canaliculatus_M_contigs7642:57..1077+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7642.2.1 ID=mRNA_H-canaliculatus_M_contigs7642.2.1|Name=mRNA_H-canaliculatus_M_contigs7642.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1021bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7642:57..1077+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7642:57..1077+ >mRNA_H-canaliculatus_M_contigs7642.2.1 ID=mRNA_H-canaliculatus_M_contigs7642.2.1|Name=mRNA_H-canaliculatus_M_contigs7642.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=486bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7642:57..1077+ (Hapterophycus canaliculatus Oshoro7m male)back to top |