mRNA_H-canaliculatus_M_contigs7634.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLW8_ECTSI) HSP 1 Score: 426 bits (1096), Expect = 1.270e-146 Identity = 209/258 (81.01%), Postives = 234/258 (90.70%), Query Frame = 1
Query: 1 MGFFDQENTPLETAWFSVLAVFSLVCFPFGIWMGRRFTILAAKLVPVISVLLVYENIIQAISNLIDDEYVLVQIGRTTHAAVIPLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHRRAVEPCSWVLRNFVRILATMIFVLGVLVNYDIA-GNDHKAGGTGLLDTKDASAHLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPECCFRVVNESGQVLFLLSLIAIGREIGREVQ 771
MGFFDQ NT LET WF+VLA SL+CFPFGIWMGRRFTILAAKLVPV+ +LL YEN++ A+SN++ D+ VQIGRTT AAVIPLFLVV FEVAYAVHKRRSVQFCGIVFDQGHRR VEPCSWVLRNFV I++ ++FV+ +LVNYDI G+D+KAGGTGL++T+DAS HLLLALLPTTGM A+ALYIAVYMWKYGN ASIVVQSTVCNGWMFLFLGTLALLGGQ+PPE CFRVVNE+GQVLFLLS+IAIGREIGREVQ
Sbjct: 1 MGFFDQANTTLETVWFAVLAAVSLLCFPFGIWMGRRFTILAAKLVPVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQDASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQ 258
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ6_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.790e-69 Identity = 116/255 (45.49%), Postives = 164/255 (64.31%), Query Frame = 1
Query: 7 FFDQENTPLETAWFSVLAVFSLVCF-PFGIWMGRRFTILAAKLVPVISVLLVYENIIQAISNLIDDEYVLVQIGRTTHAAVIPLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHRRAVEPCSWVLRNFVRILATMIFVLGVLVNYDIAGNDHKAGGTG-LLDTKDASAHLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPECCFRVVNESGQVLFLLSLIAIGREIGRE 765
FF +N+ ETA F AV + +C P ++ R + A L+P++ +L+ Y NII A+ + +++ + +A V+PLFLV +FE+AY VHK RSV+FCGIVFDQGHR EPCSW LR+ VR+ A +F+LG+LV + G+D A GTG AS +L L+P T MAA++LY++++MW+YGN+ASIVV ST CN WM L LG+L +L GQIPP FR N GQ + L +++ + E+ RE
Sbjct: 5 FFGLDNSEAETAIFISCAVVNGICLVPAAVFWRRTPGMTATWLMPLLCILMCYVNIILALGDSVNNNNPACLLANVVYALVVPLFLVALFEMAYTVHKTRSVKFCGIVFDQGHRINTEPCSWFLRHAVRMCALGLFILGILVYFHSIGSDDAAAGTGGYTQFGGASVQFILCLVPATAMAAVSLYLSIFMWRYGNNASIVVHSTACNRWMLLLLGSLCMLAGQIPPAPAFRASNALGQTILLATMLVVYHEVERE 259
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y231_HETAK) HSP 1 Score: 169 bits (428), Expect = 1.290e-47 Identity = 95/260 (36.54%), Postives = 144/260 (55.38%), Query Frame = 1
Query: 1 MGFFDQENTPLETAWFSVLAVFSLVCFPFGIWMGRRFTILA--AKLVPVISVLLVYENIIQAISNLIDDEYVLVQIGRTTHAAVIPLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHRRAVEPCSWVLRNFVRILATMIFVLGVLVNYDIAGNDHKAGGTGLLDTKDASA-HLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPECCFRVVNESGQVLFLLSLIAIGREIGREVQ 771
M FF +E + LE +F + SL+ I +R L P+ V++ EN + A+ +D + V H+ V+PLFLV+ F++AY VHK RSV F I FD+GHR+ VEP SWV+RN +R++A + + LVNY++ G AG +G LD A + L+LLP T +AA L IA +W YG ++V+ +TV N W+ LFLG + L G + P + V + +G++ L+ +I I I ++ Q
Sbjct: 1 MTFFGEEESNLELTFFGIFTGISLILLIPAIIFAKRNVRFGYFVWLTPIQCVIMAIENFMLALGENLDSDSSGVTFYLALHSLVVPLFLVISFDIAYMVHKNRSVNFFCISFDEGHRKRVEPHSWVMRNLMRMVAACLVAVNALVNYNVLGAAADAGRSGYLDWSAADPLEVTLSLLPGTVLAAFNLGIAFRLWLYGTQRALVIHATVWNEWILLFLGAMGQLAGLVAPTELYSVTSNAGEIFLLMCIIFIQYTIKKDFQ 260
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8D5_9STRA) HSP 1 Score: 144 bits (364), Expect = 8.490e-38 Identity = 81/259 (31.27%), Postives = 144/259 (55.60%), Query Frame = 1
Query: 1 MGFFDQENTPLETAWFSVLAVFSLVCFPFGIWMGRRFTILAAKLVPVISVLLVYENIIQAISNLIDDEYVLVQIGRTTHAAVIPLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHRRAVEPCSWVLRNFVRILATMIFVLGVLVNYDIAG-NDHKAGGTGLLDT-KDASAHLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPECCFRVVNESGQVLFLLSLIAIGREIGREVQ 771
M F + N E A +SV + ++ + + A L + + ++++EN + + +D+E L HA +IPL LV +FE+AY VHK RSV+FCGI FD+GHR++ S+++R + +AT I + +LVN+D+ +D AG TG + +AH++ A+LP+ +A YI+V +W YG++ S+ V ++ N W +F+G +A + GQI + + V + G+ + L ++ + I R+++
Sbjct: 36 MTFLGESNENYEYACYSVFIL--VLSLDLAVAVSYASVFRTACLGAITAAIMIFENAVLLAGDRVDEEGALAGATGIVHAFIIPLLLVYVFELAYQVHKHRSVKFCGITFDEGHRKSFGLKSFLVRRSTQFIATAIVAMNILVNFDLLSVDDEDAGSTGYAGLERGENAHIIFAILPSIILALYVAYISVALWLYGSNNSMTVYTSFVNPWGIVFVGGIAQVAGQIFNDEHYPVTSNGGETVLLSTIAFLIPHIVRDLE 292
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KLA8_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.300e-37 Identity = 93/256 (36.33%), Postives = 138/256 (53.91%), Query Frame = 1
Query: 1 MGFFD---QENTPLETAWFSVLAVFSLVCFPFGIWMGR-----RFTILAAKLVPVISVLLVYENIIQAISNLIDDEYV----LVQIGRTTHAAVI------PLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHR-RAVEPCSWVLRNFVRILATMIFVLGVLVNYD-IAGN---DHKAGGTG---LLD---TKDASAHLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPE 681
M F D Q TP A + +L + SL C + I +GR R L P+ ++L EN A S + + + +V++ A + P+ L+VMFEV Y +HKRRSV FCG+ FD+G R + S +LRN +R LAT++ V+G++VN+D I N D AG G L + T HLLL+LLP + A++ Y++ MW+YG +S++V S++CN W + F GTLA+ GQ+ E
Sbjct: 1 MTFIDPTQQPPTPGLIAGYVILTLVSLACTIWAIQLGRHRTHYRLFFSVRVLFPIAILILALENATLAASGKLMAQTIEGISVVEVHPLVRAIFVLQTFEVPILLIVMFEVTYLIHKRRSVNFCGMYFDEGRRLNNTQAMSCMLRNSIRSLATVLLVMGLMVNFDFITSNVPIDELAGRAGWWTLFEEEGTFQQELHLLLSLLPIAVLVAVSFYLSTMMWRYGTSSSMIVHSSICNPWFYCFFGTLAMAAGQLFAE 256
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZR4_TRICV) HSP 1 Score: 143 bits (361), Expect = 3.970e-37 Identity = 92/264 (34.85%), Postives = 146/264 (55.30%), Query Frame = 1
Query: 46 FSVLAVFSLVCFPFGIWMGR-----RFTILAAKLVPVISVLLVYENIIQAISNLIDDEYV----LVQIGRTTHAAVIPLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHRRA---VEPC-SWVLRNFVRILATMIFVLGVLVNYDIAGN----DHKAGGTG----LLDTKDAS--AHLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPECCFRVVNESGQVLFLLSLIAIGREIGREV 768
+SVL +L+C ++GR R A L P++ + + EN A S L ++ V VQ A +PL L+V FE+ Y VHKRRSV FCG+ FD+G R + P S+VLRNF+R+LA + +G++ N+D+ G+ D AG G + D + S HLLL+LLP+ + Y + +W+YG ++S+VV S++ N + F GTLAL GQ+ PE F + + G ++F ++L+ + E+ +++
Sbjct: 19 YSVLCAVALLCSVRACYIGRTRSHYRTLASARFLFPLVCLFIAIENAALAASGLFYEDKVEDNRFVQAIFALQATQVPLLLIVTFELTYLVHKRRSVNFCGMYFDEGRRVSKIITTPMKSFVLRNFIRMLAVFLLAMGIMGNFDLLGDVTQVDSLAGRAGWWALVQDPRGWSKKGHLLLSLLPSAVLVLCCFYFSFLLWRYGTESSMVVHSSILNPYFSPFFGTLALATGQLFPERWFPLTSNVGLLVFCITLLLLMSEVDKDM 282
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT76_PYTOL) HSP 1 Score: 139 bits (351), Expect = 1.000e-35 Identity = 79/251 (31.47%), Postives = 142/251 (56.57%), Query Frame = 1
Query: 28 PLETAWFSVLAVFSLVCFPFGIWMGRRF-TILAAKLVPVISVLLVYENIIQAISNLIDDEYVLVQIGRTTHAAVIPLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHRRAV--EPCSWVLRNFVRILATMIFVLGVLVNYDIAGNDHKAGGTGLLDTKDASAHLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPECCFRVVNESGQVLFLLSLIAIGREIGREVQ 771
P A+F + A +LV F F + R++ T+ A L P I L+++N + A S L D V+ H+ VIP+ L+V +EVAY VHK++SV FCGI F+ GHRR + S R FV ++A + V+ +L +Y + L+ D++ H + +++P + ++LYI + +W YG S +V +T N W+++ +G++ALL G + PE + + + +G+++ + +++ + RE+ ++Q
Sbjct: 12 PAFRAFFWIFAAVALVLFYFAMGYARKYRTVAAFVLPPFICFCLIFDNAVMATSGLNRDSST-VRAMLAFHSCVIPMILLVCYEVAYLVHKQKSVNFCGISFESGHRRMLGRNALSTCQRFFVWLIAIALLVIDLLASYHWQNEPAEIKSVYALEG-DSTTHAVFSVVPALVLVLLSLYIGLQLWNYGTFYSYMVHATCFNPWIWMLVGSIALLTGYLMPEPLYALTSNAGELIMVATIVRMFREVHHDMQ 260
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6D2G5_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.400e-35 Identity = 76/204 (37.25%), Postives = 121/204 (59.31%), Query Frame = 1
Query: 199 DEYVLVQIGRTTHAAVIPLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHRR----AVEPCSWVLRNFVRILATMIFVLGVLVNYDIAGN----DHKAGGTG----LLDTK--DASAHLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPECCFRVVNESGQVLFLLSLIAIGREIGREV 768
+E LVQ A +P+ LVV FE+ Y VHK+R V FCG+ FD+G R S++LRN +RILA ++F +G++ N+D+ G+ D AG G + D + D HLLL+LLPT +A + Y + +W+YG ++S+VV S++ N W F GTLAL GQ+ E F + + G ++F+++L+ + E+ +++
Sbjct: 78 EENKLVQAVYALQALEVPILLVVSFELTYLVHKKRGVNFCGMYFDEGRRVQKIITTPVKSFLLRNLIRILAVILFAMGIVGNFDLLGDVSTVDELAGRAGWWSLVKDPRPWDQKWHLLLSLLPTAVLALCSFYFSFLLWRYGTESSMVVHSSILNPWFNPFFGTLALAVGQVFSEKWFPLTSNIGLLIFVITLLLLMVEVDKDM 281
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GID0_PHYRM) HSP 1 Score: 133 bits (335), Expect = 8.480e-34 Identity = 81/271 (29.89%), Postives = 140/271 (51.66%), Query Frame = 1
Query: 10 FDQENTPLETAWFSVLAVFSLVCFPFGIWMGRRFTILAAKLV-PVISVLLVYENIIQAISNLIDDEYVLVQIGRTTHAAVIPLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHRRAVEPCS-------------WV---LRNFVRILATMIFVLGVLVNYDIAGNDHKAGGTGLLDTKDASAHLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPECCFRVVNESGQVLFLLSLIAIGREIGREVQ 771
++ P F V A +V F F + ++++ AA L+ P I +V++N + A + ID + Q HA V P+ L+V +E+AY VHK +SV FCGI F+ GHR C WV LR FV ++ + VL +LV Y + + D++AH + A+LP + A+ALYI + +W YG + S +V +T N W+++ +G +ALL G + P + + + +G+++ + +++ + RE+ ++Q
Sbjct: 6 YEVHVLPAFVPIFWVFAAVGIVLFYFSLGYAKKYSTTAAFLLTPFICFSIVFDNAVMATTG-IDRRHASTQAMLAFHACVTPMLLLVCYELAYLVHKHKSVNFCGISFESGHRERGSSCDNAGAASDLAKRRWWVSTCLRFFVWLVGCALLVLNLLVAYRWTSDLTPEIASMYALHGDSTAHAVCAILPALVLVALALYIGLRLWNYGTNYSYMVHATCFNPWIWMLVGAVALLIGYLMPSPIYALSSNAGELIMMATIVRMFREVHHDMQ 275
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RTW4_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.110e-33 Identity = 92/292 (31.51%), Postives = 147/292 (50.34%), Query Frame = 1
Query: 1 MGFFDQENTPLETAWFS---VLAVFSLVCFPFGIWMGR-----RFTILAAKLVPVISVLLVYENIIQAISNLID-----DEYVLVQIGRTTHAAVIPLFLVVMFEVAYAVHKRRSVQFCGIVFDQGHRR----AVEPC-SWVLRNFVRILATMIFVLGVLVNYDIAGN----DHKAGGTG---LLDTKD----------ASAHLLLALLPTTGMAAIALYIAVYMWKYGNDASIVVQSTVCNGWMFLFLGTLALLGGQIPPECCFRVVNESGQVLFLLSLIAIGREIGREVQ 771
M F D P T + +L + L CF + +G+ R L+P+ +L E A S + D+ V +QI A +P+ L FE Y VHKRRSV FCG+ FD+G R A P S++LRNF+R +A ++ V+G++VN+D+ N D AG G L + K+ + HL L+LLPT + + Y + +W+YG ++S+VV S+ N W LF GT+ L G+ E + + + +G VLF++S + + E+ ++++
Sbjct: 1 MTFIDPSAEPPTTGMITGYIILVIAFLFCFLKAVRLGQTRSHYRSFFAIRFLLPLCCFILAVETATLAASGIYSENKSLDDNVWIQIVYVIQAFEVPILLQSTFETCYLVHKRRSVNFCGMYFDEGRRVNRGIATTPMKSFILRNFIRAIAVLLLVMGLVVNFDLLRNVVEVDRLAGRAGWWPLFERKNNAEGQQLDFSENTHLFLSLLPTAILILCSFYFSALLWRYGTESSMVVHSSCWNPWFSLFFGTIFLFIGECFSEKWYPISSNTGFVLFIISYLHLMTEVDKDMK 292 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7634.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7634.2.1 >prot_H-canaliculatus_M_contigs7634.2.1 ID=prot_H-canaliculatus_M_contigs7634.2.1|Name=mRNA_H-canaliculatus_M_contigs7634.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=257bp MGFFDQENTPLETAWFSVLAVFSLVCFPFGIWMGRRFTILAAKLVPVISVback to top mRNA from alignment at H-canaliculatus_M_contigs7634:1149..5139+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7634.2.1 ID=mRNA_H-canaliculatus_M_contigs7634.2.1|Name=mRNA_H-canaliculatus_M_contigs7634.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3991bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7634:1149..5139+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7634:1149..5139+ >mRNA_H-canaliculatus_M_contigs7634.2.1 ID=mRNA_H-canaliculatus_M_contigs7634.2.1|Name=mRNA_H-canaliculatus_M_contigs7634.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=771bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7634:1149..5139+ (Hapterophycus canaliculatus Oshoro7m male)back to top |