mRNA_H-canaliculatus_M_contigs7634.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7634.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7634.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: SET (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCQ4_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.530e-68
Identity = 114/141 (80.85%), Postives = 123/141 (87.23%), Query Frame = 1
Query:    1 MAFDPEVAPGALDDFHAWLTKSGVKLGDNAALAGRSRLAGGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADLALADASSTR 423
            MAFDP+V PGALD FHAWLTKSGV+L DNA LAGRS LAGGRGLV+TK IE GQ VLAIPQSL LTAAGLK+SG+A +VKGFEGWTG+TGLIALQ+LWERA   GSKMAPWIAVLPT  EL +PLFW EADL LADASSTR
Sbjct:   76 MAFDPDVTPGALDAFHAWLTKSGVRLTDNAVLAGRSPLAGGRGLVATKAIETGQSVLAIPQSLGLTAAGLKSSGIAQYVKGFEGWTGETGLIALQVLWERALREGSKMAPWIAVLPTEGELEMPLFWGEADLTLADASSTR 216          
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: Putative (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloropl n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE37_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.410e-29
Identity = 61/127 (48.03%), Postives = 87/127 (68.50%), Query Frame = 1
Query:   43 FHAWLTKSGVKLGDNAALAGRSRLAGGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADLALADASSTR 423
            F AWL K+GVK G+     G+S L GGRGL++T P++ GQ  + +P +L +TA  +    ++  +KG++G  GDTGLIALQ+L+E+ QG  S +A W+++LP    L +PLFW E DLA+AD SSTR
Sbjct:   55 FKAWLAKAGVKGGECLLEIGQSSLDGGRGLMTTAPLKAGQAAVTVPATLCITADKVVKGALSSHLKGYDGCLGDTGLIALQLLYEQQQGSKSAIAAWLSLLPAQGTLDMPLFWPEKDLAVADGSSTR 181          
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FGC7_HETAK)

HSP 1 Score: 102 bits (255), Expect = 8.060e-23
Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 1
Query:   40 DFHAWLTKSGVKLGDNAALAGRSR--LAGGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADLALADASSTR 423
            D  AWL  +GVK  D +   G S+  L  G+GL+ TK ++ G   L IPQSL L+ +    S +  ++K FEGWTG+ G+IAL +L+E++ G  SK  P+IA LP  E++  PLFW+E  L LA  SST+
Sbjct:   55 DLEAWLADNGVK--DLSVTVGDSKGKLGMGKGLIVTKAMKRGTAALNIPQSLCLSVSSALESQIGKYLKNFEGWTGEVGIIALHLLYEKSIGNDSKFGPFIAALP--EQIEHPLFWNEETLELAQKSSTK 180          
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: SET (domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GD31_VITBC)

HSP 1 Score: 87.0 bits (214), Expect = 3.450e-17
Identity = 44/132 (33.33%), Postives = 76/132 (57.58%), Query Frame = 1
Query:   31 ALDDFHAWLTKSGVKLGDNAALAGRSRLAGGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADLALADASSTRV 426
            ALD F  WL   GVK  D+ ++  +     G GL+ TKPI+ G+   ++P SL++T      + +   ++G      +  ++AL +L+E+++G  S++APW+AVLPT +EL  P+ W + + A    S+T+ 
Sbjct:   78 ALDSFKQWLANKGVK-SDSVSVDVKPSDVAGLGLICTKPIKRGEAAASVPMSLSITKESATQTPMREHLEGAMSDNSEMAMLALYLLYEKSKGDASEIAPWLAVLPTKDELNNPILWSDGERAELARSTTKA 208          
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FAY5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.420e-15
Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 1
Query:   43 FHAWLTKSGVKLGDNAALAGRSRLA--GGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELG---IPLFWDEADLALADASSTR 423
            F  WL ++GV+   + A  GR+  +   G G+   K +  G  V+A+P  L +T    ++S V P ++ F+GWTG TG+IA Q+L+E++QG  SK  PWI +LP A   G   +PLF     +A  D  STR
Sbjct:   77 FMDWLEQNGVQ--SDTAEVGRADASRGSGMGIRLKKKVGKGDKVVAVPLQLCMTVETARSSAVGPLLENFDGWTGATGIIAAQLLFEKSQGARSKFFPWIELLPPARTPGALELPLF---GGMAGVDKCSTR 203          
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: SET (domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P2S8_9CHLO)

HSP 1 Score: 63.9 bits (154), Expect = 4.220e-9
Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 1
Query:  118 GGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADL 396
            GGRG+V+T PI  G  ++++P +LAL++A     G    V G   W      +A  +L ERA G  S++AP++A LP A ++G+P  W E +L
Sbjct:   83 GGRGIVTTFPITPGAALVSVPPALALSSAAPPPPGTPAAVWGAAPWQA---RLAALLLAERAAGASSRLAPFVAALPGAGDVGLPATWPEEEL 172          
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A866_TRICV)

HSP 1 Score: 58.5 bits (140), Expect = 3.140e-7
Identity = 45/127 (35.43%), Postives = 63/127 (49.61%), Query Frame = 1
Query:  127 GLVSTKPIENGQWVLAIP--QSLALTAAG--LKNSGVAPFVKGFEGWTGDTGLIALQILWERAQ------GGGS--------KMAP--------WIAVLPTAEELGI--PLFWDEADLALADASSTR 423
            GL++T  + +G   L++P   +L  TA G  +   G+ P  +G++GWTGD GLIA+ +L E A+      GGG         K  P        WI  LPT  E+    PL W E D  +  +SSTR
Sbjct:  128 GLIATDDVRSGDVALSVPYDDALQFTAKGSSVTFGGILP--EGYDGWTGDAGLIAMSVLNELARTAAADDGGGDGGAGVPLPKRKPPVQNLIEAWIKSLPTPSEMSSSHPLLWSEDDQEILQSSSTR 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
SET1.530e-6880.85domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Putative1.410e-2948.03ribulose-1,5-bisphosphate carboxylase/oxygenase la... [more]
Hypothetical8.060e-2344.62protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
SET3.450e-1733.33domain-containing protein n=1 Tax=Vitrella brassic... [more]
Hypothetical1.420e-1538.64protein n=2 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
SET4.220e-938.71domain-containing protein n=1 Tax=Raphidocelis sub... [more]
Hypothetical3.140e-735.43protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7634contigH-canaliculatus_M_contigs7634:289..720 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LLW9
PFAMsRubis-subs-bind,SET
Model size432
Max annot lvl2759|Eukaryota
KEGG rclassRC01974
KEGG koko:K00592
KEGG ReactionR05179
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.52e-67
EggNOG OGsKOG1337@1|root,KOG1337@2759|Eukaryota
EC2.1.1.127,2.1.1.259
Descriptionpeptidyl-lysine monomethylation
Cds size432
COG categoryI
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854101.8872395-CDS-H-canaliculatus_M_contigs7634:288..7201696854101.8872395-CDS-H-canaliculatus_M_contigs7634:288..720Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7634 289..720 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7634.1.1prot_H-canaliculatus_M_contigs7634.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7634 289..720 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7634.1.1

>prot_H-canaliculatus_M_contigs7634.1.1 ID=prot_H-canaliculatus_M_contigs7634.1.1|Name=mRNA_H-canaliculatus_M_contigs7634.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=144bp
MAFDPEVAPGALDDFHAWLTKSGVKLGDNAALAGRSRLAGGRGLVSTKPI
ENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWER
AQGGGSKMAPWIAVLPTAEELGIPLFWDEADLALADASSTRVR*
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mRNA from alignment at H-canaliculatus_M_contigs7634:289..720-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7634.1.1 ID=mRNA_H-canaliculatus_M_contigs7634.1.1|Name=mRNA_H-canaliculatus_M_contigs7634.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=432bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7634:289..720- (Hapterophycus canaliculatus Oshoro7m male)
ATGGCCTTCGATCCGGAGGTTGCACCCGGCGCTCTTGATGATTTCCACGC CTGGCTGACCAAGTCGGGGGTGAAGCTTGGGGATAACGCTGCCCTCGCCG GTAGATCCCGACTGGCCGGTGGAAGGGGTCTCGTGAGCACCAAGCCGATC GAGAACGGGCAGTGGGTTCTTGCGATTCCGCAGTCTCTCGCCCTGACTGC CGCGGGGCTGAAGAACTCCGGGGTCGCGCCATTCGTGAAAGGTTTCGAGG GTTGGACGGGGGACACGGGCTTGATCGCGCTGCAGATCTTGTGGGAGAGG GCTCAGGGAGGAGGATCCAAGATGGCGCCTTGGATCGCGGTCTTGCCGAC AGCGGAGGAGCTGGGGATTCCCCTATTCTGGGACGAGGCTGATCTAGCGC TCGCGGACGCGTCCTCGACGAGGGTGAGGTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7634:289..720-

>mRNA_H-canaliculatus_M_contigs7634.1.1 ID=mRNA_H-canaliculatus_M_contigs7634.1.1|Name=mRNA_H-canaliculatus_M_contigs7634.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=432bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7634:289..720- (Hapterophycus canaliculatus Oshoro7m male)
ATGGCCTTCGATCCGGAGGTTGCACCCGGCGCTCTTGATGATTTCCACGC
CTGGCTGACCAAGTCGGGGGTGAAGCTTGGGGATAACGCTGCCCTCGCCG
GTAGATCCCGACTGGCCGGTGGAAGGGGTCTCGTGAGCACCAAGCCGATC
GAGAACGGGCAGTGGGTTCTTGCGATTCCGCAGTCTCTCGCCCTGACTGC
CGCGGGGCTGAAGAACTCCGGGGTCGCGCCATTCGTGAAAGGTTTCGAGG
GTTGGACGGGGGACACGGGCTTGATCGCGCTGCAGATCTTGTGGGAGAGG
GCTCAGGGAGGAGGATCCAAGATGGCGCCTTGGATCGCGGTCTTGCCGAC
AGCGGAGGAGCTGGGGATTCCCCTATTCTGGGACGAGGCTGATCTAGCGC
TCGCGGACGCGTCCTCGACGAGGGTGAGGTAG
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