mRNA_H-canaliculatus_M_contigs7634.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: SET (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCQ4_9PHAE) HSP 1 Score: 224 bits (571), Expect = 1.530e-68 Identity = 114/141 (80.85%), Postives = 123/141 (87.23%), Query Frame = 1
Query: 1 MAFDPEVAPGALDDFHAWLTKSGVKLGDNAALAGRSRLAGGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADLALADASSTR 423
MAFDP+V PGALD FHAWLTKSGV+L DNA LAGRS LAGGRGLV+TK IE GQ VLAIPQSL LTAAGLK+SG+A +VKGFEGWTG+TGLIALQ+LWERA GSKMAPWIAVLPT EL +PLFW EADL LADASSTR
Sbjct: 76 MAFDPDVTPGALDAFHAWLTKSGVRLTDNAVLAGRSPLAGGRGLVATKAIETGQSVLAIPQSLGLTAAGLKSSGIAQYVKGFEGWTGETGLIALQVLWERALREGSKMAPWIAVLPTEGELEMPLFWGEADLTLADASSTR 216
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: Putative (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloropl n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE37_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.410e-29 Identity = 61/127 (48.03%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 43 FHAWLTKSGVKLGDNAALAGRSRLAGGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADLALADASSTR 423
F AWL K+GVK G+ G+S L GGRGL++T P++ GQ + +P +L +TA + ++ +KG++G GDTGLIALQ+L+E+ QG S +A W+++LP L +PLFW E DLA+AD SSTR
Sbjct: 55 FKAWLAKAGVKGGECLLEIGQSSLDGGRGLMTTAPLKAGQAAVTVPATLCITADKVVKGALSSHLKGYDGCLGDTGLIALQLLYEQQQGSKSAIAAWLSLLPAQGTLDMPLFWPEKDLAVADGSSTR 181
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FGC7_HETAK) HSP 1 Score: 102 bits (255), Expect = 8.060e-23 Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 40 DFHAWLTKSGVKLGDNAALAGRSR--LAGGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADLALADASSTR 423
D AWL +GVK D + G S+ L G+GL+ TK ++ G L IPQSL L+ + S + ++K FEGWTG+ G+IAL +L+E++ G SK P+IA LP E++ PLFW+E L LA SST+
Sbjct: 55 DLEAWLADNGVK--DLSVTVGDSKGKLGMGKGLIVTKAMKRGTAALNIPQSLCLSVSSALESQIGKYLKNFEGWTGEVGIIALHLLYEKSIGNDSKFGPFIAALP--EQIEHPLFWNEETLELAQKSSTK 180
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: SET (domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GD31_VITBC) HSP 1 Score: 87.0 bits (214), Expect = 3.450e-17 Identity = 44/132 (33.33%), Postives = 76/132 (57.58%), Query Frame = 1
Query: 31 ALDDFHAWLTKSGVKLGDNAALAGRSRLAGGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADLALADASSTRV 426
ALD F WL GVK D+ ++ + G GL+ TKPI+ G+ ++P SL++T + + ++G + ++AL +L+E+++G S++APW+AVLPT +EL P+ W + + A S+T+
Sbjct: 78 ALDSFKQWLANKGVK-SDSVSVDVKPSDVAGLGLICTKPIKRGEAAASVPMSLSITKESATQTPMREHLEGAMSDNSEMAMLALYLLYEKSKGDASEIAPWLAVLPTKDELNNPILWSDGERAELARSTTKA 208
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FAY5_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.420e-15 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 1
Query: 43 FHAWLTKSGVKLGDNAALAGRSRLA--GGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELG---IPLFWDEADLALADASSTR 423
F WL ++GV+ + A GR+ + G G+ K + G V+A+P L +T ++S V P ++ F+GWTG TG+IA Q+L+E++QG SK PWI +LP A G +PLF +A D STR
Sbjct: 77 FMDWLEQNGVQ--SDTAEVGRADASRGSGMGIRLKKKVGKGDKVVAVPLQLCMTVETARSSAVGPLLENFDGWTGATGIIAAQLLFEKSQGARSKFFPWIELLPPARTPGALELPLF---GGMAGVDKCSTR 203
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: SET (domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P2S8_9CHLO) HSP 1 Score: 63.9 bits (154), Expect = 4.220e-9 Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 118 GGRGLVSTKPIENGQWVLAIPQSLALTAAGLKNSGVAPFVKGFEGWTGDTGLIALQILWERAQGGGSKMAPWIAVLPTAEELGIPLFWDEADL 396
GGRG+V+T PI G ++++P +LAL++A G V G W +A +L ERA G S++AP++A LP A ++G+P W E +L
Sbjct: 83 GGRGIVTTFPITPGAALVSVPPALALSSAAPPPPGTPAAVWGAAPWQA---RLAALLLAERAAGASSRLAPFVAALPGAGDVGLPATWPEEEL 172
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A866_TRICV) HSP 1 Score: 58.5 bits (140), Expect = 3.140e-7 Identity = 45/127 (35.43%), Postives = 63/127 (49.61%), Query Frame = 1
Query: 127 GLVSTKPIENGQWVLAIP--QSLALTAAG--LKNSGVAPFVKGFEGWTGDTGLIALQILWERAQ------GGGS--------KMAP--------WIAVLPTAEELGI--PLFWDEADLALADASSTR 423
GL++T + +G L++P +L TA G + G+ P +G++GWTGD GLIA+ +L E A+ GGG K P WI LPT E+ PL W E D + +SSTR
Sbjct: 128 GLIATDDVRSGDVALSVPYDDALQFTAKGSSVTFGGILP--EGYDGWTGDAGLIAMSVLNELARTAAADDGGGDGGAGVPLPKRKPPVQNLIEAWIKSLPTPSEMSSSHPLLWSEDDQEILQSSSTR 252 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7634.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7634.1.1 >prot_H-canaliculatus_M_contigs7634.1.1 ID=prot_H-canaliculatus_M_contigs7634.1.1|Name=mRNA_H-canaliculatus_M_contigs7634.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=144bp MAFDPEVAPGALDDFHAWLTKSGVKLGDNAALAGRSRLAGGRGLVSTKPIback to top mRNA from alignment at H-canaliculatus_M_contigs7634:289..720- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7634.1.1 ID=mRNA_H-canaliculatus_M_contigs7634.1.1|Name=mRNA_H-canaliculatus_M_contigs7634.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=432bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7634:289..720- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7634:289..720- >mRNA_H-canaliculatus_M_contigs7634.1.1 ID=mRNA_H-canaliculatus_M_contigs7634.1.1|Name=mRNA_H-canaliculatus_M_contigs7634.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=432bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7634:289..720- (Hapterophycus canaliculatus Oshoro7m male)back to top |