mRNA_H-canaliculatus_M_contigs76310.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs76310.1.1
Unique NamemRNA_H-canaliculatus_M_contigs76310.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ8_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.760e-25
Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 1 
Query:   10 TSKQITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMMMDMPLDRRDQMTPR 183
            T + ITLQNLVKIFGAEEHAREIMGDVNLSG+G INYDEFKTMMMDMPLD R+QMTPR
Sbjct:  453 TRRCITLQNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGREQMTPR 510
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: Calcium-dependent (protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG63_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.710e-11
Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 1 
Query:   19 QITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMMM 144
            +IT+ NL+KIFG+EEHAREIMGDV+++ DGVI Y+EF+ MM+
Sbjct:  443 KITVDNLIKIFGSEEHAREIMGDVDINSDGVIEYEEFRQMML 484
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: Calcium-dependent (protein kinase, isoform 2 (CDPK 2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI14_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 2.790e-10
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:   13 SKQITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMM 141
            S  ITL NLV IFG+E+HAREI+GD++L GDG I++DEF+ MM
Sbjct:  330 SGSITLANLVSIFGSEDHAREIVGDIDLDGDGEISFDEFRQMM 372
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L236_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.860e-10
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:   13 SKQITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMM 141
            S  ITL NLV IFG+E+HAREI+GD++L GDG I++DEF+ MM
Sbjct:  456 SGSITLANLVSIFGSEDHAREIVGDIDLDGDGEISFDEFRQMM 498
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: Calmodulin ((Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UKM4_SYMMI)

HSP 1 Score: 62.0 bits (149), Expect = 9.630e-10
Identity = 26/46 (56.52%), Postives = 38/46 (82.61%), Query Frame = 1 
Query:    4 KNTSKQITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMM 141
            +N S  +T+ +LV I G+EEHARE+ G+++L+GDGVI+Y+EFK MM
Sbjct:  308 QNGSGSLTIPDLVAIMGSEEHAREVAGEIDLNGDGVISYEEFKAMM 353
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: Calcium-dependent (protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T8G8_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 7.980e-8
Identity = 24/40 (60.00%), Postives = 34/40 (85.00%), Query Frame = 1 
Query:   22 ITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMM 141
            IT+Q+LV+  G EE+ARE++GD++ +GDGVI+ DEFK MM
Sbjct:  511 ITVQDLVEALGTEENAREVLGDIDRNGDGVISLDEFKNMM 550
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B6U7_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.050e-7
Identity = 21/40 (52.50%), Postives = 34/40 (85.00%), Query Frame = 1 
Query:   22 ITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMM 141
            IT  +++++FG+E+ A+E+MGD++L GDGVI+Y EF +MM
Sbjct:  586 ITRNDMIRVFGSEKQAQEVMGDIDLDGDGVISYKEFSSMM 625
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: EF-hand (domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418E6X0_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.010e-7
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 1 
Query:    7 NTSKQ--ITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMMMDMPLDRRDQMTPR 183
            +T KQ  IT  +LV+  G+E+HA+E+M +++ +GDG I++DEF  MM    L   D+ TPR
Sbjct:    5 DTKKQGVITKDDLVRFMGSEDHAQEVMDEIDTNGDGAISFDEFCAMMQHKNLG--DEGTPR 63
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAY0_HETAK)

HSP 1 Score: 53.5 bits (127), Expect = 4.730e-7
Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 1 
Query:   22 ITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMMMDMPLDRR 165
            IT ++LV+IFG+EE A +I+GDV+   DG I+Y+EFK MM++    RR
Sbjct:   96 ITREDLVRIFGSEEQAHQILGDVDRDQDGQISYEEFKRMMVESFTPRR 143
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BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V6M5_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 6.690e-7
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 1 
Query:    7 NTSKQ--ITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMMMDMPLDRRDQMTPR 183
            +T KQ  IT  +LV+  G+E+HA+E+M +++ +GDG I++DEF  MM    L   D+ TPR
Sbjct:   43 DTKKQGVITKDDLVRFMGSEDHAQEVMDEIDTNGDGAISFDEFCAMMQHKNLG--DEGTPR 101
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76310.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
Uncharacterized2.760e-2587.93protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Calcium-dependent1.710e-1166.67protein kinase n=1 Tax=Tribonema minus TaxID=30337... [more]
Calcium-dependent2.790e-1065.12protein kinase, isoform 2 (CDPK 2) n=1 Tax=Ectocar... [more]
Uncharacterized2.860e-1065.12protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Calmodulin9.630e-1056.52(Fragment) n=1 Tax=Symbiodinium microadriaticum Ta... [more]
Calcium-dependent7.980e-860.00protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Hypothetical2.050e-752.50protein n=2 Tax=Corethron hystrix TaxID=216773 Rep... [more]
EF-hand3.010e-744.26domain-containing protein (Fragment) n=1 Tax=Aphan... [more]
Hypothetical4.730e-752.08protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Uncharacterized6.690e-744.26protein (Fragment) n=1 Tax=Aphanomyces astaci TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76310contigH-canaliculatus_M_contigs76310:321..503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008617220.1
PFAMsEF-hand_1,EF-hand_5,EF-hand_6,EF-hand_7,EF-hand_8,Pkinase
Model size183
Max annot lvl2759|Eukaryota
KEGG koko:K13412
KEGG Pathwayko04626,ko05145,map04626,map05145
Hectar predicted targeting categoryother localisation
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0015630,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032496,GO:0032675,GO:0032680,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0035556,GO:0035924,GO:0036211,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044351,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045859,GO:0045860,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0070935,GO:0071310,GO:0071363,GO:0071704,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0098657,GO:0140096,GO:1900034,GO:1901564,GO:1901568,GO:1901700,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1903311,GO:1903312,GO:1903555
Exons1
Evalue1.44e-06
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size183
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854101.70612-CDS-H-canaliculatus_M_contigs76310:320..5031696854101.70612-CDS-H-canaliculatus_M_contigs76310:320..503Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs76310 321..503 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76310.1.1prot_H-canaliculatus_M_contigs76310.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs76310 321..503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs76310.1.1

>prot_H-canaliculatus_M_contigs76310.1.1 ID=prot_H-canaliculatus_M_contigs76310.1.1|Name=mRNA_H-canaliculatus_M_contigs76310.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=61bp
TKNTSKQITLQNLVKIFGAEEHAREIMGDVNLSGDGVINYDEFKTMMMDM
PLDRRDQMTPR
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mRNA from alignment at H-canaliculatus_M_contigs76310:321..503-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs76310.1.1 ID=mRNA_H-canaliculatus_M_contigs76310.1.1|Name=mRNA_H-canaliculatus_M_contigs76310.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=183bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76310:321..503- (Hapterophycus canaliculatus Oshoro7m male)
ACGAAAAACACTTCAAAACAGATCACTCTCCAAAACCTGGTGAAGATTTT
CGGGGCCGAGGAGCATGCCCGTGAGATCATGGGCGATGTGAATTTGTCCG
GCGACGGCGTGATCAACTACGACGAGTTCAAGACGATGATGATGGACATG
CCCCTGGACCGGAGGGATCAGATGACCCCCCGC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76310:321..503-

>mRNA_H-canaliculatus_M_contigs76310.1.1 ID=mRNA_H-canaliculatus_M_contigs76310.1.1|Name=mRNA_H-canaliculatus_M_contigs76310.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=183bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76310:321..503- (Hapterophycus canaliculatus Oshoro7m male)
ACGAAAAACACTTCAAAACAGATCACTCTCCAAAACCTGGTGAAGATTTT
CGGGGCCGAGGAGCATGCCCGTGAGATCATGGGCGATGTGAATTTGTCCG
GCGACGGCGTGATCAACTACGACGAGTTCAAGACGATGATGATGGACATG
CCCCTGGACCGGAGGGATCAGATGACCCCCCGC
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