mRNA_H-canaliculatus_M_contigs7616.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: WD (repeat-containing protein 60 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE1_ECTSI) HSP 1 Score: 434 bits (1116), Expect = 3.110e-136 Identity = 280/506 (55.34%), Postives = 312/506 (61.66%), Query Frame = 1
Query: 121 AVARGIFSVDTLLAEKKEGRRKNSGFRMADAKALTRALAKGDPRTERVLAVRAASRLEVESSRLFDQAPILPIDLYHRRLRGQLATIRQAGSQTNEDARSVDVQTEEIFRMDKEVQFHLGHDDTALENLMRRLRSNRRRPAVFDHSSSSGMGENKVGDEEKSHQRTVPE------ENGAGLSTTTFKGLYGGRSDDLDALPAVRS----RTGVENLSSSGGSLTTSLSGVGTLQPPPPLRLGKFLRQASVVMETLCEENLLYASTASSARGQGEGGILDPAARMAGDGEAQDDRIGR---SLFSEGGGRNGEGWEEVGGTEAWAFGPGMAATAGAQRRGEEEKKPNVNGVGVDNEDTMG-ALGRLLEGSEVAGIEFSRVKWSMLVTAHARPAEQGRKRRRNINDAGGSGDPSESSEQGVALEGCGIICVWNADNPNAAPVSVLCGEGRLSCLCLPLRHAHVVVAGTAEGCLLLWDLREPASSSRAAVSRGLGLRCGIRPPTYSTAG 1596
AVA+G FSVD K+ RK SGF+MADAKALTRALAKGDPR ERV A+R ASRLEVES RLFDQ PILPIDLYHRRLRGQ A IRQAG+QTN+DARSV+ QT+EI + KEVQFHLGHDDTALENLMRRLRSNRR P G ++ QRTV + +G G +TTTFKG+Y G P + R G + SSG +S G TL PPPLRLGKFLRQASVVMETLCEENLL+A + +G LDPA GE +D +GR +LFS GGR GEGWEEV ATA A G D G G LLEGSEV G+EFS+VK SMLVTAHARP RR + E+ LEGCG++CVWN +N APVSVLCGEG SCLCL AHVV+ GT EGCLLLWDLRE AS RAA SR LGL CGIR PTY TAG
Sbjct: 340 AVAKGKFSVDASADVKRS--RKGSGFKMADAKALTRALAKGDPRAERVRAIRGASRLEVESVRLFDQVPILPIDLYHRRLRGQPALIRQAGTQTNDDARSVEGQTDEIVQSHKEVQFHLGHDDTALENLMRRLRSNRRPPERHQAKGEEGG---------QTQQRTVVDGGEDVPASGPGSATTTFKGIYNGNGMVAGTDPGEQEYPAPRYGTDFDGSSGR--VSSAGGSDTL--PPPLRLGKFLRQASVVMETLCEENLLHAPV----KRRGGSHPLDPAR-----GE-HEDAVGRERGALFSGAGGREGEGWEEVXXXXXXXXXXXXXATAAATEDTGSSTAEEKRRQGGDEGRVRGRGAGALLEGSEVVGVEFSKVKRSMLVTAHARPVG----RRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNTENVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLRETASEGRAAESRELGLHCGIRAPTYVTAG 816
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDF6_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.860e-10 Identity = 61/183 (33.33%), Postives = 84/183 (45.90%), Query Frame = 1
Query: 1066 MAATAGAQRRGEEEKKPNVNGVGVDNEDTMGALGR------LLEGSEVAGIEFSRVKWSMLVTAH--ARPAEQGRKRRRNINDAGGSGDPSESSEQGVALEGCGIICVWNADNPNAAPVSVLCGEGRLSCLCLPLRHAHVVVAGTAEGCLLLWDLREPASSSRAAVSRGLGLRCGIRPPTYST 1590
MAA A A RRG E K E AL R LLEG + + FS+ L+ A+ A P +G + E G +G G++CV++ N +A +++C GR +C L +HV VAGT+EG L++WDLRE R S L + G+R TYST
Sbjct: 291 MAAAARAARRGGESKSDGS----FSTETVHIALKRRAKSNALLEGRALVDVCFSQAAQHELLVAYGAATPIAKG-----------------VADELGAIAQG-GLLCVYDIHNMDAPKFALVC-PGRPTCCALSPHRSHVAVAGTSEGSLVMWDLRESNKMHRTDASVDLDVYTGLRRATYST 450
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: WD (repeat-containing protein 60-like isoform X1 n=3 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425A049) HSP 1 Score: 72.8 bits (177), Expect = 1.010e-9 Identity = 48/142 (33.80%), Postives = 70/142 (49.30%), Query Frame = 1
Query: 1174 LEGSEVAGIEFSRVKWSMLVTAHARPAEQGRKRRRNINDAGGSGDPSESSEQGVALEGCGIICVWNADNPNAAPVSVLCGEGRLSCLCLPLRHAHVVVAGTAEGCLLLWDLREPA-SSSRAAVSRGLGLRCGIRPPTYSTAG 1596
LEG +V ++F V+ ++L+TAH P +K + S L GCG+IC+WN + P P VL + +SC C V AGT +G ++ WDLREP+ S V+ G + ++ PTYST G
Sbjct: 587 LEGRDVLQVQFHPVQTNLLLTAHTLPRLDDKKAK-------------TKSISKHPLSGCGLICLWNLNMPTK-PQKVLSCQSPISCCCFSPSKTSSVFAGTEDGSVVAWDLREPSFMHSFYPVNEG---KVEVQVPTYSTDG 711
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: WD (repeat-containing protein 60-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A462B) HSP 1 Score: 65.9 bits (159), Expect = 1.520e-7 Identity = 43/141 (30.50%), Postives = 69/141 (48.94%), Query Frame = 1
Query: 1174 LEGSEVAGIEFSRVKWSMLVTAHARPAEQGRKRRRNINDAGGSGDPSESSEQGVALEGCGIICVWNADNPNAAPVSVLCGEGRLSCLCLPLRHAHVVVAGTAEGCLLLWDLREPASSSRAAVSRGLGLRCGIRPPTYSTAG 1596
LEG V +F+ V+ +L+TAH G+ S ++ +L+G G++C WN + P+ + C SC P++ + +V AG +G +++WDLRE SSS + + IR PT+STAG
Sbjct: 667 LEGRRVLDTKFNLVQTHLLLTAHD------------------CGEVETSEDKDSSLQGRGVVCYWNVNEPSQPQKILYCESSPKSCCFSPVKSS-LVFAGLEDGSVVVWDLRE--SSSIHSTINNKDRQWVIRRPTFSTAG 786
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.450e-7 Identity = 45/124 (36.29%), Postives = 62/124 (50.00%), Query Frame = 1
Query: 196 FRMADAKALTRALAKGDPRTER------VLAVRAASRLEVESSRLFDQAPILPIDLYHRRLRG--------QLATIRQAGSQTNEDARSVDVQTEEIFRMDKEVQFHLGHDDTALENLMRRLRS 525
+R+A+AKA+++ L R R + AA+RL E L+ AP+ P++ YH RLR QT +D R V QTE D E QFH+G DDTALEN++ R R+
Sbjct: 190 YRLAEAKAVSQRLGGAAARGARCGXXXXARSAAAAARLSTERFVLYSAAPVGPLERYHARLRSGGXXXXXXXXXXXXXXXXQTRDDDRDVGTQTETARAADAEAQFHMGSDDTALENMLARARA 313
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: WD (repeat domain 60 n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672JCP7_SALFA) HSP 1 Score: 63.5 bits (153), Expect = 7.330e-7 Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 1333 VALEGCGIICVWNADNPNAAPVSVLCGEGRLSCLCLPLRHAHVVVAGTAEGCLLLWDLREPASSSRAAVSRGLGLRCG-----IRPPTYST 1590
V L+ C +IC+WN P+ P +L E + C C A +V AGT+ G ++LWDLREPASS + L+ G R PT+ST
Sbjct: 476 VPLDSCTVICIWNIWEPSR-PQKILVYESEVKCCCFSPGKATLVFAGTSVGSVVLWDLREPASSHQQ-------LQLGEEEWTFRQPTFST 558
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRM8_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 7.410e-7 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 166 KKEGRRKNSGFRMAD--AKALTRALAKGDPRTERVLAVRAASRLEVESSRLFDQAPILPIDLYHRRLRGQLATIRQAGSQTNEDARSVDVQTEEIFRMDKEVQFHLGHDDTALENLMRRLR 522
K RRK + + D A R + DPR R+ +++ +E FDQ P P+++Y RR+RG+ I Q +QTN+DAR+V+VQTEE ++E+QF G DDT E + +R
Sbjct: 182 KHAPRRKQAVKKYVDFGASIQVRKVQSDDPRLARLKSIQEKVAMEEGRFVAFDQNPQTPLEVYFRRMRGR-GLIAQTFTQTNDDARTVEVQTEETATQEQEIQFVFG-DDTEFERRLASVR 300
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: WD (repeat-containing protein 60 isoform X1 n=4 Tax=Salarias fasciatus TaxID=181472 RepID=UPI001176C305) HSP 1 Score: 63.5 bits (153), Expect = 8.100e-7 Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 1333 VALEGCGIICVWNADNPNAAPVSVLCGEGRLSCLCLPLRHAHVVVAGTAEGCLLLWDLREPASSSRAAVSRGLGLRCG-----IRPPTYST 1590
V L+ C +IC+WN P+ P +L E + C C A +V AGT+ G ++LWDLREPASS + L+ G R PT+ST
Sbjct: 778 VPLDSCTVICIWNIWEPSR-PQKILVYESEVKCCCFSPGKATLVFAGTSVGSVVLWDLREPASSHQQ-------LQLGEEEWTFRQPTFST 860
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: WD (repeat domain 60 n=3 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3JG91_MONAL) HSP 1 Score: 63.2 bits (152), Expect = 1.030e-6 Identity = 37/91 (40.66%), Postives = 48/91 (52.75%), Query Frame = 1
Query: 1333 VALEGCGIICVWNADNPNAAPVSVLCGEGRLSCLCLPLRHAHVVVAGTAEGCLLLWDLREPASSSRAAVSRGLGLRCG-----IRPPTYST 1590
V L+ C IIC+WN P+ P +L E + C C A +V AGT+ G ++LWDLREPASS L+ G R PT+ST
Sbjct: 642 VRLDSCTIICIWNIWEPSR-PQKILVYESEIQCCCFSPGKAILVFAGTSVGSVVLWDLREPASSHWC-------LKIGEDEWTFRQPTFST 724
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTV7_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 5.020e-6 Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 1354 IICVWNADNPNAAPVSVLCGEGRLSCLCLPLRHAHVVVAGTAEGCLLLWDLREPASSSRAAVSRGLGLRCGIRPPTYSTAG 1596
++CVW+ N APV L EG +SC L V+AG+ EG + LWDLR+P ++ GL L+ + PP+YSTAG
Sbjct: 476 LLCVWDV-NQTTAPVRWLRCEGSVSCCNLGPNREMFVLAGSDEGDVQLWDLRQPVAAHFEVAFGGLKLK--VAPPSYSTAG 553 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7616.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7616.1.1 >prot_H-canaliculatus_M_contigs7616.1.1 ID=prot_H-canaliculatus_M_contigs7616.1.1|Name=mRNA_H-canaliculatus_M_contigs7616.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=532bp SSSSSQSIRGAKGAKGAKSAAAATVAGGEAAAGGSGGSLTAVARGIFSVDback to top mRNA from alignment at H-canaliculatus_M_contigs7616:395..5238+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7616.1.1 ID=mRNA_H-canaliculatus_M_contigs7616.1.1|Name=mRNA_H-canaliculatus_M_contigs7616.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4844bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7616:395..5238+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7616:395..5238+ >mRNA_H-canaliculatus_M_contigs7616.1.1 ID=mRNA_H-canaliculatus_M_contigs7616.1.1|Name=mRNA_H-canaliculatus_M_contigs7616.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1596bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7616:395..5238+ (Hapterophycus canaliculatus Oshoro7m male)back to top |