mRNA_H-canaliculatus_M_contigs76054.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 153 bits (387), Expect = 4.420e-40 Identity = 86/169 (50.89%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 1 MDPAEERVERERALENSVEEAVQNGLSTDGACCLRDILGRRVNAFRRALRGDPPARVEPMRVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPKRD----TFRLVSDYQAVNSQVEQSPAVMPNHE-DMRDLLGAKYFGKLDLLQGY 492
M PAEE R AL+ +V+ A GLS G LR ++ RR N FRR +RGDPPA V PM V+ K K VK++ R YNP KT WL +C+AALVA L+ N+QA+WAS M PKR T+R V D++AVN Q+E+SP MP+ E DM+ L A +G LD+LQGY
Sbjct: 589 MTPAEEEAGRADALDRAVDSAADAGLSPWGLDRLRQVVDRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGY 757
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 144 bits (363), Expect = 7.500e-37 Identity = 84/166 (50.60%), Postives = 104/166 (62.65%), Query Frame = 1
Query: 1 MDPAEERVERERALENSVEEAVQNGLSTDGACCLRDILGRRVNAFRRALR-GDPPARVEPMRVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPKRDTFRLVSDYQAVNSQVEQSPAVMPNHE-DMRDLLGAKYFGKLDLLQGY 492
M P EE R +L+++V A GL LR I+ R NAFRR LR GDPPA VEP+RV KP + VK++PR YNP+KT WLA L+ N+QAVWAS AMA PK+ +RLVSD++A N QVE+ P VMPN E + L AK++G LDLLQ Y
Sbjct: 697 MSPEEEASARSASLDSAVSSAAAAGLEEPHVGRLRGIISERWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWLAG-------LGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWY 855
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE) HSP 1 Score: 144 bits (362), Expect = 7.810e-37 Identity = 82/166 (49.40%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 1 MDPAEERVERERALENSVEEAVQNGLSTDGACCLRDILGRRVNAFRRALR-GDPPARVEPMRVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPKRDTFRLVSDYQAVNSQVEQSPAVMPNHE-DMRDLLGAKYFGKLDLLQGY 492
M P EE R +L+++V AV GL LR I+ R NAFR +R GDPPA VEP+RV KP VK++PR YNP+KT WLA C+A+ V L+ N+QAV AS AMA PK+ +RL+SD++A N+QVE+ P VMPN E M K+ G LDLL+ Y
Sbjct: 471 MSPEEEASARSASLDSAVSSAVVAGLDEPHVGRLRSIIRERWNAFRPGMRPGDPPANVEPLRVTLKPGALPVKARPRTYNPIKTAWLAGCMASPVVLGLVFLNMQAVSASAAMATPKKGGYRLLSDFRAANNQVEKVPGVMPNPEASMAQFSATKFHGSLDLLRAY 636
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: CCHC-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE) HSP 1 Score: 105 bits (261), Expect = 3.820e-23 Identity = 58/116 (50.00%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 166 RVEPMRVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPK------RDTFRLVSDYQAVNSQVEQSPAVMPNHEDMRDLL-GAKYFGKLDLLQGY 492
+VEP+++ KP V+ V+ K R Y+P K WL+ C+AALVA ++V IQAVWASPAM VPK +RL +DY N Q E+ P V+P+ E +L GA FGKLDLLQGY
Sbjct: 393 KVEPLKMTLKPGVQHVQEKARVYSPAKATWLSGCMAALVAMGMVVKTIQAVWASPAMTVPKPGRVGREGEYRLGNDYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGY 508
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYH1_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.980e-15 Identity = 53/146 (36.30%), Postives = 75/146 (51.37%), Query Frame = 1
Query: 64 VQNGLSTDGACCLRDILGRRVNAFRRALRGDPPARVEPMRVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPKRDT--FRLVSDYQAVNSQVEQSPAVMPNHED-MRDLLGAKYFGKLDLLQGY 492
V NGL+ A LR++L R + FR + GDPP +VEP++V+ KP VK RRY P +L + L L+ N +A WAS VPK+D R+ D Q +N+ E MPN + M L+G + L+ +GY
Sbjct: 40 VHNGLTNQDAGRLREMLLRYADVFREDVEGDPPVKVEPIKVRLKPGSVPVKCSMRRYPPAHMDFLKRHVEQLERAGLVYKNNRATWASAPRIVPKKDPGDLRMTIDSQPINACTEPMSWPMPNLDSAMTILVGTTVYFTLNWTKGY 185
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: Reverse (transcriptase domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RML2_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 7.210e-15 Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = 1
Query: 37 ALENSVEEAVQNGLSTDGACCLRDILGRRVNAFRRALRGDPPARVEPMRVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPK---RDTFRLVSDYQAVNSQVEQSPAVMPNHEDMRDLLGAK-YFGKLDLLQGY 492
AL VE AV NGL T+ A +R++L + + +R DPPA VEP++V + +S PR+Y P++ ++ + +LV L+ N + WA + V K +D FRL DY+ VN MP+ D K FG+ D QG+
Sbjct: 74 ALVQLVERAVANGLPTEHAETVRELLAQYPDVWREGFGQDPPANVEPLQVTLRQDAVPFRSPPRKYAPLQVQFIREYVKSLVDNGLVEQNNASRWACAVVPVRKPGTKDKFRLTIDYRPVNRVTVPIAGTMPSVATTVDAFNGKNVFGRFDFTQGF 229
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TS63_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 6.650e-13 Identity = 54/167 (32.34%), Postives = 83/167 (49.70%), Query Frame = 1
Query: 1 MDPAEERVERERALENSVEEAVQNGLSTDGACCLRDILGRRVNAFRRALRGDPPARVEPMRVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPKRD-TFRLVSDYQAVNSQVEQSPAVMPNHEDMRDLLGAK--YFGKLDLLQGY 492
++ A++ E L + +A + GL + L L ++ FR + GDPP +VEP+RV+ KP VK RRY P+ +L +A L L+ N ++ WA VPK +R+ D + VN+ E P MPN + + +L K YF LD ++GY
Sbjct: 191 LEQAKQEAEVCEVLSAKINKAEKEGLPEVSSKKLTQFLRENIDVFRLEMVGDPPIKVEPLRVRVKPGAVPVKCGLRRYPPLYMEYLEGHVAELERAGLVYRNNRSRWACAPRIVPKDPGDYRMTFDSRPVNACTEPMPWPMPNLDAVLSILAGKSVYFS-LDWMKGY 356
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 4.930e-12 Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 181 RVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPKRDTFRLVSDYQAVNSQV 399
+V KP + VK+K R Y+P K WL C+AALVA ++V IQAVWASPAMAVPKR + Q +N V
Sbjct: 548 KVTLKPGAQPVKAKARVYSPAKATWLTGCMAALVAMGMVVRTIQAVWASPAMAVPKRGRAVMTEILQGLNCMV 620
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WJF9_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 7.100e-11 Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 1
Query: 121 RVNAFRRALRGDPPARVEPMRVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPKR-DTFRLVSDYQAVNSQVEQSPAVMPNHE-DMRDLLGAKYFGKLDLLQGY 492
R + +R L DPPARV PMRV++KP K + K R+Y P ++ LV + N ++ W P + V K +R +DY+ VN+ VE +MP+ D+ + A++FG D ++GY
Sbjct: 382 RFDLWRVRLGADPPARVPPMRVRFKPGAKPYRCKDRQYPPEVRRFMKDFNDNLVQLGWVYENQESRWVRPVLPVRKSCGEYRQTADYKPVNALVEAIVGLMPDLPIDLEVVKDAEFFGLFDFIKGY 507
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1R1_BRELC) HSP 1 Score: 66.2 bits (160), Expect = 1.160e-9 Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 1
Query: 49 SVEEAVQNGLSTDGACCLRDILGRRVNAFRRALRGDPPARVEPMRVQWKPQVKAVKSKPRRYNPMKTGWLASCIAALVAFDLLVHNIQAVWASPAMAVPKRDTFRLVSDYQAVNSQVEQSPAVMPNHEDMRDLLGAKYFGKLDLLQGY 492
+ EE +GL+ + L ++ + + +R L DPPA+V+P+RVQ+ V SK R Y K+ +L +A LV L+ N + W+SPA+ + K V DY VNS MP DMR L+ AK++ + D +G+
Sbjct: 321 NAEECDDDGLADE----LFNLAMKYKSVWRSKLGADPPAKVDPLRVQFAEGAVQVTSKARPYPREKSDFLRVYVADLVRLGLVTRNNHSHWSSPALLIRKSP----VDDYTRVNSLSVSIAGAMP---DMRTLV-AKFYARFDNYKGF 456 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76054.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs76054.1.1 >prot_H-canaliculatus_M_contigs76054.1.1 ID=prot_H-canaliculatus_M_contigs76054.1.1|Name=mRNA_H-canaliculatus_M_contigs76054.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=164bp MDPAEERVERERALENSVEEAVQNGLSTDGACCLRDILGRRVNAFRRALRback to top mRNA from alignment at H-canaliculatus_M_contigs76054:1..492- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs76054.1.1 ID=mRNA_H-canaliculatus_M_contigs76054.1.1|Name=mRNA_H-canaliculatus_M_contigs76054.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=492bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76054:1..492- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76054:1..492- >mRNA_H-canaliculatus_M_contigs76054.1.1 ID=mRNA_H-canaliculatus_M_contigs76054.1.1|Name=mRNA_H-canaliculatus_M_contigs76054.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=492bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76054:1..492- (Hapterophycus canaliculatus Oshoro7m male)back to top |