mRNA_H-canaliculatus_M_contigs7603.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ6_ECTSI) HSP 1 Score: 390 bits (1003), Expect = 1.090e-131 Identity = 238/429 (55.48%), Postives = 267/429 (62.24%), Query Frame = 1
Query: 1 MGMHVPSPVEAGEHSSCACVVQPSSSGRQSEHR---RMTLPSPVGLSSIDIEIEDAHTPVPRGGFPGGSPTGEIHGTPGRIQRGETKHSARCCVTLKRKGSRNLVRKTHARSVSTGSVDS----SCCGCGGAXXXXX----------------------------------------------------GGSNIGG----------STP-----------------KMELDSGRSYFVERSTVCDACGFCDDTCEVAWCNGCDERRANLEDVYGPIMLSALEGGAVAGK----------GAEGGGGS--KLAPVLARRYPRKSSYTLCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGGRDCAEDFFFHSRAAKREWRQYRIGSLVACRGEEAATGEGSDGE-GAERSMRTGSDCVIS 990
MGMHVPSPV+AGE S CAC+++P S+GRQ + R RM+LPSP LS I EIEDAHTP+P GGFPGGSPTGE+ GTPGR R E HS VTLKRKG R++VR+ HARS S GSV SC CG XXXXX G ++GG TP ++ DSG SYFVERSTVCDAC +C+DTCEVAWCNGCDE R +LE+ YG +MLSA E G+ GA+ GGGS KLAPVL+RRYPRKSSYTLCEVRRRKVTGACW+VSQGSVYDVTAAL DHPGGKRSVL+NAGGRDCAEDFFFHSRAAK++WRQYRIGSLVACR G+G G G ERSMR S CVIS
Sbjct: 1 MGMHVPSPVDAGEPSPCACLIRPPSAGRQDKDRHDRRMSLPSPAELSVI--EIEDAHTPIPLGGFPGGSPTGEVIGTPGRPHR-ERNHSGGGFVTLKRKGVRDVVRQAHARSASAGSVGGKPAGSCRTCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCGYDERDHVHDLEANEPLGPPSPMPFRRPSGSGSVGGRGSXXXRRGSGTPGSAAAAVASLEDAAQRIAVDPDSGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETRMHLEEAYGKLMLSAAEVAGAGGRHXXXXXXCETGADNGGGSRLKLAPVLSRRYPRKSSYTLCEVRRRKVTGACWVVSQGSVYDVTAALPDHPGGKRSVLKNAGGRDCAEDFFFHSRAAKKQWRQYRIGSLVACR---PGQGDGDGGAAGDERSMRIASSCVIS 423
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGK6_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.340e-19 Identity = 52/150 (34.67%), Postives = 72/150 (48.00%), Query Frame = 1
Query: 463 STVCDACGFCDDTCEVAWCNGCDERRANLEDVYGPIMLSALEGGAVAGKGAEGGGGSKLAPVLARRYPRKSSYTLCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGG-RDCAEDFFFHSRAAKREWRQYRIGSLVACRG 909
S C+AC +C DTC C C + + +S P R +TLC+VR+ + WIV+ +YDVTA + HPGG+ +LR AGG RDC +DF FHS+A +R W +Y++G LV C G
Sbjct: 46 SGPCEACPYCSDTCGDDSCKLCVNKTC--------LEIST--------------------PTCPPRSASLPVFTLCQVRKHCTEKSVWIVAGKDIYDVTAYIDRHPGGRECILRKAGGARDCTDDFQFHSKAGRRGWNKYKVGVLVPCPG 167
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1K2_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.970e-18 Identity = 52/151 (34.44%), Postives = 77/151 (50.99%), Query Frame = 1
Query: 472 CDACGFCDDTCEVAWCNGCDERRANLEDVYGPIM------LSALEGGAVAGKGAEGGGGSKLAPVLARRYPRKSSYTLCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGGR-DCAEDFFFHSRAAKREWRQYRIGSLVAC 903
CDAC C DTC+ A N C + P M L AL +G+ E +++YT+C+++R + WI+ ++YD T + HPGG ++LR +GG DC ED FHS A+REWR++++G+LVAC
Sbjct: 38 CDACPCCRDTCDNA--NSCIPCQKKRNATTMPRMHESSSNLLALLSSICSGESPENNNA-------------QNTYTMCQLKRHNHAESAWILVGDTIYDATPYIRSHPGGTETILRKSGGAADCTEDMRFHSGRAQREWRKFKVGTLVAC 173
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Cytochrome (b5 n=1 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A422NRL8_TRYRA) HSP 1 Score: 84.0 bits (206), Expect = 8.650e-16 Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 679 YTLCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGG-RDCAEDFFFHSRAAKREWRQYRIGSLVA 900
+TL EVR+ + WIV+ VYDVT+ L HPGG ++LR +GG +DC EDF+FHSRAA+R W Y+IG L A
Sbjct: 18 FTLDEVRQHNDRLSTWIVAGNFVYDVTSILDTHPGGANALLRRSGGVKDCTEDFYFHSRAARRTWDHYKIGELDA 92
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Cytochrome (b5, putative n=5 Tax=Trypanosoma cruzi TaxID=5693 RepID=Q4DUS3_TRYCC) HSP 1 Score: 82.8 bits (203), Expect = 1.950e-15 Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 1
Query: 679 YTLCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGG-RDCAEDFFFHSRAAKREWRQYRIGSL 894
+TL EVR+ + WIV+ SVYDVT L HPGG ++LR GG +DC EDF+FHSRAA+R W +IG L
Sbjct: 18 FTLDEVRQHNDRSSIWIVAGNSVYDVTHILDTHPGGLNALLRRGGGVKDCTEDFYFHSRAARRTWNSLKIGEL 90
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Cytochrome (b5 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1F7_PLAHL) HSP 1 Score: 82.8 bits (203), Expect = 9.960e-15 Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 685 LCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGGRDCAEDFFFHSRAAKREWRQYRIGSLVAC 903
+CEV+ +CW+VS G VYDVT + DHPGG RS+LR AGG DCA D FHS+ A++ + IG L C
Sbjct: 161 MCEVKLHCSLDSCWLVSSGQVYDVTGQVTDHPGGVRSILRKAGGPDCARDMKFHSKNARKIMEKCFIGKLRQC 233
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQE5_HYAAE) HSP 1 Score: 81.6 bits (200), Expect = 5.810e-14 Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 685 LCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGGRDCAEDFFFHSRAAKREWRQYRIGSLVAC 903
+CEV+ + +CW+VS G VYDVT + HPGG RS+LR AGG DCA D FH+++A++ + IG L C
Sbjct: 219 MCEVKLHRSLESCWLVSSGQVYDVTGLVIAHPGGVRSILRKAGGPDCARDMKFHTKSARKMMEKCFIGKLEQC 291
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNE4_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 9.720e-14 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 685 LCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGGRDCAEDFFFHSRAAKREWRQYRIGSLVAC 903
+CEV+ + +CW+VS G VYDVT + HPGG RS+LR AGG DCA D FH++ A++ + IG L C
Sbjct: 210 MCEVKLHRSLESCWLVSSGQVYDVTGLITVHPGGIRSILRKAGGPDCARDMKFHTKKARKMMEKCFIGKLEQC 282
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=1 Tax=Porcisia hertigi TaxID=2761500 RepID=A0A836GYK1_9TRYP) HSP 1 Score: 77.0 bits (188), Expect = 2.530e-13 Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 649 LARRYPRKSSYTLCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGG-RDCAEDFFFHSRAAKREWRQYRIGSLV 897
L +R+P S E+R + WIVS GSVYDVT L HPGG+ ++LR GG +DC D+ FHSR A+REW ++G +
Sbjct: 11 LKKRWPVLSEE---EIRIHNTRRSLWIVSGGSVYDVTGMLGSHPGGEAAILRRGGGSKDCEVDYKFHSRYARREWDSRKVGEIT 91
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2PHH2_PHYPN) HSP 1 Score: 79.7 bits (195), Expect = 2.950e-13 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 685 LCEVRRRKVTGACWIVSQGSVYDVTAALADHPGGKRSVLRNAGGRDCAEDFFFHSRAAKREWRQYRIGSLVACRGEEAATGE 930
+CEV+ + +CW+V G VYDVT + HPGG RS+LR AGG DCA D FH++ A++ + IG L C + +GE
Sbjct: 226 MCEVKLHRSLESCWLVCSGQVYDVTGLVTAHPGGVRSILRKAGGPDCARDMKFHTKNARKMMEKCFIGKLQQCGDDVDCSGE 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7603.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7603.2.1 >prot_H-canaliculatus_M_contigs7603.2.1 ID=prot_H-canaliculatus_M_contigs7603.2.1|Name=mRNA_H-canaliculatus_M_contigs7603.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=331bp MGMHVPSPVEAGEHSSCACVVQPSSSGRQSEHRRMTLPSPVGLSSIDIEIback to top mRNA from alignment at H-canaliculatus_M_contigs7603:1558..4275- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7603.2.1 ID=mRNA_H-canaliculatus_M_contigs7603.2.1|Name=mRNA_H-canaliculatus_M_contigs7603.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2718bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7603:1558..4275- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7603:1558..4275- >mRNA_H-canaliculatus_M_contigs7603.2.1 ID=mRNA_H-canaliculatus_M_contigs7603.2.1|Name=mRNA_H-canaliculatus_M_contigs7603.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=993bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7603:1558..4275- (Hapterophycus canaliculatus Oshoro7m male)back to top |