mRNA_H-canaliculatus_M_contigs76001.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: Tetracycline (resistance MFS efflux pump n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A3D2FEI5_9RHOB) HSP 1 Score: 294 bits (752), Expect = 1.430e-96 Identity = 141/176 (80.11%), Postives = 158/176 (89.77%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
YL+MA+AG+IW L IGRI+GGITAATHSTANAYIADISKPEDK+ANFGL+GAAFG+GF+LGPLIGGLLAEYGTRAPFYAAAVL+ LNALFGW +L ETVTD IRRPFSL R+NP GA K L KLP I LL VYF+Y +A TVYPA+WSYFGKERFDWDPATIGLSLGLFG+ +A+
Sbjct: 87 YLLMAVAGTIWLLFIGRIIGGITAATHSTANAYIADISKPEDKSANFGLIGAAFGLGFVLGPLIGGLLAEYGTRAPFYAAAVLSGLNALFGWVVLKETVTDAIRRPFSLKRANPFGAFKALSKLPMIGTLLGVYFVYSIAHTVYPAIWSYFGKERFDWDPATIGLSLGLFGIMMAV 262
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: Tetracycline (resistance protein, class C n=1 Tax=Ascidiaceihabitans donghaensis TaxID=1510460 RepID=A0A2R8BC13_9RHOB) HSP 1 Score: 290 bits (742), Expect = 4.790e-95 Identity = 139/176 (78.98%), Postives = 156/176 (88.64%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
Y+VMA+AGSIW LL+GRIVGGITAATHSTANAYIADISKPEDKAANFGL+GAAFGIGF+LGP++GGLLAE+GTRAPFYAAA LAALNA FG+F+L ETVTDKIRRPF R+NP GA K LG+ P I LL VYF+YQVAF VYPA+WSYFGK RFDWDPA IGLSL LFG+ +A+
Sbjct: 87 YIVMAVAGSIWLLLVGRIVGGITAATHSTANAYIADISKPEDKAANFGLIGAAFGIGFVLGPIVGGLLAEFGTRAPFYAAAALAALNAAFGYFVLKETVTDKIRRPFRWARANPFGAFKALGQFPGIRKLLFVYFIYQVAFGVYPAIWSYFGKARFDWDPAMIGLSLALFGIMLAI 262
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: TCR/Tet (family MFS transporter n=1 Tax=Tateyamaria pelophila TaxID=328415 RepID=UPI001CBA9A39) HSP 1 Score: 283 bits (724), Expect = 3.030e-92 Identity = 136/176 (77.27%), Postives = 158/176 (89.77%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
YLVMA+AGSIW LL GR+VGGITAAT +TA AY+ADIS PE KAANFGL+GAAFG+GF++GPLIGGLLAEYGTRAPFYAAA LAALNA+FGW IL+ETVTD+IRRPFS R+NP+G L++LGKLP I LL+VYFLYQ+AFTVYPA+WSYFG+ERF W PATIGLSL LFG+ +A+
Sbjct: 87 YLVMAVAGSIWLLLAGRLVGGITAATPATAAAYMADISPPEKKAANFGLIGAAFGLGFVIGPLIGGLLAEYGTRAPFYAAAALAALNAVFGWMILTETVTDRIRRPFSWARANPLGTLRILGKLPAIGPLLIVYFLYQLAFTVYPAIWSYFGQERFGWSPATIGLSLALFGIMLAV 262
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: Tetracycline (resistance MFS efflux pump n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A3B8R639_9RHOB) HSP 1 Score: 281 bits (720), Expect = 9.310e-92 Identity = 135/176 (76.70%), Postives = 157/176 (89.20%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
YLVMA+ SIW LLIGR+VGGITAAT STA AY+ADISKPE KAANFGL+GAAFG+GF++GPLIGG LAEYGTRAPFYAAA+LAALNA FGW IL+ETVTD+IRRPFS +R+NP+G L++LGKLP I LL+VYFLYQ+AFTVYPA+WSYFG+ERF W PA IGLSL LFG+ +A+
Sbjct: 87 YLVMAMVSSIWLLLIGRLVGGITAATQSTAAAYMADISKPEKKAANFGLIGAAFGMGFVIGPLIGGFLAEYGTRAPFYAAAILAALNAAFGWVILTETVTDRIRRPFSWSRANPVGTLRILGKLPTIGPLLLVYFLYQMAFTVYPAIWSYFGQERFGWSPAIIGLSLALFGIMLAI 262
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: TCR/Tet (family MFS transporter n=1 Tax=Roseobacter sp. YSTF-M11 TaxID=2859783 RepID=UPI001C607147) HSP 1 Score: 278 bits (710), Expect = 3.520e-90 Identity = 137/176 (77.84%), Postives = 157/176 (89.20%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
YLVMA+AGSI+ LL GRIVGGITAAT STANAY+ADIS PED+AANFGL+GAAFGIGF+LGPL+GGLLAEYGTRAPFYAAAVLAALNA+FG+F+L ETVTD IRRPF +R+NP+G+++ L LP + LL VYFLYQVAF VYPAVWS+FGKERF WDPATIGLSL LFGV +A+
Sbjct: 87 YLVMAVAGSIFLLLAGRIVGGITAATQSTANAYMADISGPEDRAANFGLIGAAFGIGFVLGPLLGGLLAEYGTRAPFYAAAVLAALNAVFGYFVLRETVTDAIRRPFRWSRANPLGSVRQLSSLPGVGPLLAVYFLYQVAFMVYPAVWSFFGKERFGWDPATIGLSLALFGVMMAI 262
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: TCR/Tet (family MFS transporter n=1 Tax=Roseobacter sp. MH60115 TaxID=2785324 RepID=UPI0018A2EECD) HSP 1 Score: 274 bits (700), Expect = 1.140e-88 Identity = 129/176 (73.30%), Postives = 159/176 (90.34%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
YLVMA+AGSI+ LL+GR+VGGITAAT STANAY+ADIS P+D+AANFGL+GAAFG+GF+LGPL+GG+LAEYGTRAPFYAAA LAALNA+FG+F+L ETVTD IRRPF R+NP+G+++ LG++P + LL+V+FLYQVAF VYPA+WSYFGKERF W+PATIGLSL LFG+ +A+
Sbjct: 87 YLVMAVAGSIFLLLLGRVVGGITAATQSTANAYMADISGPDDRAANFGLIGAAFGVGFVLGPLLGGVLAEYGTRAPFYAAAGLAALNAIFGYFVLRETVTDDIRRPFRWARANPLGSIRQLGRVPGVGPLLIVFFLYQVAFMVYPAIWSYFGKERFGWEPATIGLSLALFGIMMAV 262
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: TCR/Tet (family MFS transporter n=1 Tax=Pseudosulfitobacter sp. DSM 107133 TaxID=2883100 RepID=UPI000DF1AF52) HSP 1 Score: 270 bits (691), Expect = 2.320e-87 Identity = 127/176 (72.16%), Postives = 153/176 (86.93%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
Y++MA+AGS+W LL+GRI+GG+ A+T STANA +AD+S PEDK+ANFGL+GAAFGIGF+LGPLIGGLLAEYGTRAPF+AAA+LA LNA+FGW +LSETVTD+IRR FS R+NP+G L+ LGKLP I LLVVYF+YQ AF YP VW+YFG RFDW PA IGLSLGLFGV++A+
Sbjct: 87 YVLMAVAGSMWLLLVGRIIGGVAASTQSTANACMADLSAPEDKSANFGLIGAAFGIGFVLGPLIGGLLAEYGTRAPFWAAAILAGLNAIFGWLVLSETVTDRIRRAFSWRRANPLGTLRALGKLPQIRRLLVVYFIYQFAFIAYPTVWAYFGHARFDWSPAMIGLSLGLFGVSMAV 262
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: TCR/Tet (family MFS transporter n=1 Tax=Roseobacter litoralis TaxID=42443 RepID=UPI001652B827) HSP 1 Score: 270 bits (691), Expect = 2.690e-87 Identity = 129/176 (73.30%), Postives = 156/176 (88.64%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
YL+MA+AGSI LLIGRIVGGITAAT STANAY+ADIS+PED+AANFGL+GAAFG+GF+LGPL+GG LAEYGTRAPFYAAA LAALNALFG+F+L ETVT +RPF R+NP+G+++ LG+LP + LL+V+FLYQVAF VYPA+W++FGKERF WDPATIGLSL LFG+ +A+
Sbjct: 87 YLLMAVAGSIALLLIGRIVGGITAATQSTANAYMADISRPEDRAANFGLVGAAFGLGFVLGPLLGGFLAEYGTRAPFYAAAALAALNALFGYFVLRETVTKDTQRPFRWARANPLGSIRQLGRLPGVGALLIVFFLYQVAFMVYPAIWAFFGKERFGWDPATIGLSLALFGIMLAI 262
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: TCR/Tet (family MFS transporter n=1 Tax=Roseobacter ponti TaxID=1891787 RepID=A0A858SWG2_9RHOB) HSP 1 Score: 266 bits (680), Expect = 1.100e-85 Identity = 127/176 (72.16%), Postives = 154/176 (87.50%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
YLVMA+AGSIW LL GR+VGGITAAT STANAY+ADIS PE++AANFGL+GAAFG+GF+LGPL+GGLLA +GTRAPFYAAA LAALN +FG+F+L ETVTD IRRPFS R+NP+G+L+ L +LP + LL+V+F+YQVAF VYPA+WS+FGK RF WDPA IGLSL LFG+ +A+
Sbjct: 87 YLVMAVAGSIWLLLAGRVVGGITAATQSTANAYMADISAPENRAANFGLVGAAFGLGFVLGPLMGGLLAGFGTRAPFYAAAALAALNGVFGYFVLKETVTDAIRRPFSRARANPMGSLRQLRRLPGLGRLLMVFFIYQVAFMVYPAIWSFFGKARFGWDPAMIGLSLALFGIMMAV 262
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Match: TCR/Tet (family MFS transporter n=1 Tax=Sulfitobacter sabulilitoris TaxID=2562655 RepID=A0A5S3PML6_9RHOB) HSP 1 Score: 266 bits (679), Expect = 1.700e-85 Identity = 128/176 (72.73%), Postives = 153/176 (86.93%), Query Frame = 1
Query: 1 YLVMAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAFGIGFILGPLIGGLLAEYGTRAPFYAAAVLAALNALFGWFILSETVTDKIRRPFSLTRSNPIGALKVLGKLPNIANLLVVYFLYQVAFTVYPAVWSYFGKERFDWDPATIGLSLGLFGVTIAL 528
YLVMA+AGSIW LL GR+VGGITAAT STANAY+ADIS+ +D+AANFGL+GAAFGIGF+LGPL+GGLLAEYGTRAPFYAAA LAALN +FG+F+LSET+ +RRPFSL R+NP+G ++ L +LP I LL VYFLYQVAF VYPAVWS+FG+ RF W P+TIGLSL LFG+ +A+
Sbjct: 87 YLVMAVAGSIWLLLAGRVVGGITAATGSTANAYMADISQQKDRAANFGLIGAAFGIGFVLGPLVGGLLAEYGTRAPFYAAAALAALNVIFGYFVLSETLGQAVRRPFSLRRANPLGVVRQLNRLPGIGALLAVYFLYQVAFMVYPAVWSFFGQARFGWGPSTIGLSLALFGIMMAV 262 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76001.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs76001.1.1 >prot_H-canaliculatus_M_contigs76001.1.1 ID=prot_H-canaliculatus_M_contigs76001.1.1|Name=mRNA_H-canaliculatus_M_contigs76001.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=173bp MAIAGSIWWLLIGRIVGGITAATHSTANAYIADISKPEDKAANFGLLGAAback to top mRNA from alignment at H-canaliculatus_M_contigs76001:3..530+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs76001.1.1 ID=mRNA_H-canaliculatus_M_contigs76001.1.1|Name=mRNA_H-canaliculatus_M_contigs76001.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=528bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76001:3..530+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76001:3..530+ >mRNA_H-canaliculatus_M_contigs76001.1.1 ID=mRNA_H-canaliculatus_M_contigs76001.1.1|Name=mRNA_H-canaliculatus_M_contigs76001.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=519bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76001:3..530+ (Hapterophycus canaliculatus Oshoro7m male)back to top |