mRNA_H-canaliculatus_M_contigs75923.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs75923.1.1
Unique NamemRNA_H-canaliculatus_M_contigs75923.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs75923.1.1 vs.
Match: Chain (A, Crystal Structure Of Human Phosphohistidine Phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT0_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 8.120e-17
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1 
Query:   28 YSMQFGPANLPRVAELCRKQYPSDYEVTWTEGGY 129
            YSMQFGPANLPRVA+LCRKQ+PSDYEVTWTEGGY
Sbjct:  125 YSMQFGPANLPRVADLCRKQFPSDYEVTWTEGGY 158
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BLAST of mRNA_H-canaliculatus_M_contigs75923.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ6_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 5.880e-16
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1 
Query:   28 YSMQFGPANLPRVAELCRKQYPSDYEVTWTEGGY 129
            YSMQFGPANLPRVA+LCRKQ+PSDYEVTWTEGGY
Sbjct:  237 YSMQFGPANLPRVADLCRKQFPSDYEVTWTEGGY 270
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75923.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Chain8.120e-1794.12A, Crystal Structure Of Human Phosphohistidine Pho... [more]
Uncharacterized5.880e-1694.12protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75923contigH-canaliculatus_M_contigs75923:301..432 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog69319.XP_008547351.1
Preferred namePHPT1
PFAMsOcnus
Model size132
Max annot lvl33208|Metazoa
KEGG koko:K01112
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000003,GO:0002682,GO:0002683,GO:0002791,GO:0002793,GO:0003006,GO:0003674,GO:0003824,GO:0004721,GO:0005246,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007548,GO:0008150,GO:0008152,GO:0008200,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010647,GO:0010648,GO:0010817,GO:0016247,GO:0016248,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0019855,GO:0022414,GO:0023051,GO:0023056,GO:0023057,GO:0032024,GO:0032502,GO:0032879,GO:0032880,GO:0032956,GO:0032970,GO:0033043,GO:0035774,GO:0035971,GO:0036211,GO:0040012,GO:0040017,GO:0042578,GO:0043086,GO:0043170,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044325,GO:0044424,GO:0044444,GO:0044464,GO:0046883,GO:0046887,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050708,GO:0050714,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050796,GO:0050854,GO:0050856,GO:0050858,GO:0050860,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051222,GO:0051223,GO:0051270,GO:0051272,GO:0051338,GO:0051339,GO:0051348,GO:0051350,GO:0051493,GO:0060341,GO:0061178,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0071704,GO:0090087,GO:0090276,GO:0090277,GO:0098772,GO:0099106,GO:0101006,GO:0140096,GO:1901564,GO:1903530,GO:1903532,GO:1904951,GO:2000145,GO:2000147,GO:2000249,GO:2000983,GO:2000984
Exons1
Evalue0.000326
EggNOG OGs2CUCZ@1|root,2S4DR@2759|Eukaryota,3A611@33154|Opisthokonta,3BT9Q@33208|Metazoa,3D9EE@33213|Bilateria,420IY@6656|Arthropoda,3SNZ3@50557|Insecta,46MFH@7399|Hymenoptera
Ec32 ortholog descriptionJanus
Ec32 orthologEc-20_003030.1
EC3.9.1.3
DescriptionJanus/Ocnus family (Ocnus)
Cds size132
COG categoryS
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854096.725808-CDS-H-canaliculatus_M_contigs75923:300..4321696854096.725808-CDS-H-canaliculatus_M_contigs75923:300..432Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs75923 301..432 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75923.1.1prot_H-canaliculatus_M_contigs75923.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs75923 301..432 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs75923.1.1

>prot_H-canaliculatus_M_contigs75923.1.1 ID=prot_H-canaliculatus_M_contigs75923.1.1|Name=mRNA_H-canaliculatus_M_contigs75923.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=44bp
PAKNLRLGRYSMQFGPANLPRVAELCRKQYPSDYEVTWTEGGY*
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mRNA from alignment at H-canaliculatus_M_contigs75923:301..432+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs75923.1.1 ID=mRNA_H-canaliculatus_M_contigs75923.1.1|Name=mRNA_H-canaliculatus_M_contigs75923.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=132bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75923:301..432+ (Hapterophycus canaliculatus Oshoro7m male)
CCCGCAAAAAACTTGCGGTTGGGCAGGTACAGCATGCAGTTCGGACCGGC
AAACCTCCCTAGAGTGGCCGAGCTCTGCCGCAAGCAGTACCCCTCGGACT
ACGAGGTCACCTGGACGGAAGGAGGCTACTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75923:301..432+

>mRNA_H-canaliculatus_M_contigs75923.1.1 ID=mRNA_H-canaliculatus_M_contigs75923.1.1|Name=mRNA_H-canaliculatus_M_contigs75923.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=132bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75923:301..432+ (Hapterophycus canaliculatus Oshoro7m male)
CCCGCAAAAAACTTGCGGTTGGGCAGGTACAGCATGCAGTTCGGACCGGC
AAACCTCCCTAGAGTGGCCGAGCTCTGCCGCAAGCAGTACCCCTCGGACT
ACGAGGTCACCTGGACGGAAGGAGGCTACTGA
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