mRNA_H-canaliculatus_M_contigs7592.1.2 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G589_ECTSI) HSP 1 Score: 489 bits (1258), Expect = 2.050e-155 Identity = 252/338 (74.56%), Postives = 272/338 (80.47%), Query Frame = 1
Query: 40 PCFSSLWGQVDHCPAWDGAWLTILCRARKSTSAAFDWTPYMADIYSFARASIHTPVSMGDAGSAPLMRGRPVAYQYQSFGPSASRRPAAMLKKLSKLMVFLLGKGGPPE----------------------------QRTVSPGALYLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGEGVLRELGRPPSAGELSRDDAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALTCMFRPLMHPRPYLAPYLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPVQGNP 969
P + SLWGQVDHCPAWDGAWLT+LCRARK SA+FDWTPYMADIYS ARASIHT VSMGDAGSAP +R R VAYQY F P+A+ LKKLSK MVFLLGKGG E QRTVSPGAL L+SLFRGLRT+FHPSNGG W+ E+GL+VNYVLK LASRVGGE VLRELG GEL++DDAGLV D LLPLVLEMVYSK+ SVGSLSNMCL+TLASLSP VAPAAAELVLRALDPVASINHTHQAPAAIR +TC+FRPLMHPRPYLAPYLPAILELTLPGLDS+DVFKT+VTLQLYHLILCWIPV G+P
Sbjct: 215 PSWFSLWGQVDHCPAWDGAWLTLLCRARKYASASFDWTPYMADIYSSARASIHTLVSMGDAGSAPPIRSRRVAYQYSVFAPTAATSRGTKLKKLSKFMVFLLGKGGSAEVVKVSDVAIVPPAGEGIGGAQDGHEGGVQRTVSPGALNLISLFRGLRTYFHPSNGGRWSLEMGLMVNYVLKSLASRVGGENVLRELGNTLPPGELTQDDAGLVIDALLPLVLEMVYSKDPSVGSLSNMCLATLASLSPKTVAPAAAELVLRALDPVASINHTHQAPAAIRVMTCIFRPLMHPRPYLAPYLPAILELTLPGLDSSDVFKTSVTLQLYHLILCWIPVLGSP 552
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMM2_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.100e-36 Identity = 86/223 (38.57%), Postives = 122/223 (54.71%), Query Frame = 1
Query: 385 GALYLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGE-------GVLRELGRPPSAGELSRD--------------------DAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALTCMFRPLMHPRPYLAPYLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPVQGNPV 972
G LL+ R LRT+ HPSN G W+ ++ L V ++ LA R+G + GV R +A +D D V LLPL EM+++K+ +V + L LA ++P VA A L+ RALDP+A++NHTHQAP A+RAL + PL+HPRP +AP+LP +L LPG+D ND KT TL+ + +LCW+P+ G P+
Sbjct: 498 GTQLLLTYLRSLRTYIHPSNLGRWSDQIALAVAWLSCALARRLGAQDGAETAGGVSPTRPRLRAACRRVQDXXXXXXXXXXXXXYPALRAADVTAVIAALLPLCHEMLFAKHPTVVDMGERSLRILAGMAPRAVAAATLPLLTRALDPIAAVNHTHQAPCALRALARLAHPLLHPRPLIAPHLPTLLAWALPGVDPNDFTKTLATLEFFDTVLCWVPIVGAPL 720
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: Proteasome (activator complex subunit 4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVD0_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.370e-32 Identity = 105/327 (32.11%), Postives = 152/327 (46.48%), Query Frame = 1
Query: 58 WGQVDHCPAWDGAWLTILCRARK---STSAAFDWTPYMADIYSFARASIHTPVSMGDAGSAPLMRGRPVAYQYQSFGPSASRRPAAMLKKL----SKLMVFLLGKGGPPE-------------------QRTVSPGALYLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGEGVLRELGRPPSAGE-LSRDDAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALTCMFRPLMHPRPYLAPYLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPV 957
W +++HC WD WL ++ RA K +T+ +A++ + S+ P G + P+ RP+ + S A + +L S + GG + + +S G L+L L +T FHPSN TT + + + +G E V G P+ E S +D +LPLV +YSK SV L+ + + LA ++P VA LV ALDP ++N TH APAAI+ LT + +PL+ RP LA LP LELTLPG+DSNDVFKT T Y ++L WIP+
Sbjct: 762 WPKIEHCADWDAGWLRVIRRAFKWGGATACVDGDAALVAELMRRVQLSLRLPSPSGF--TPPVRTSRPLYLSPFGTKTAGSAYGAGIAVRLMGQCSATDYYGTHVGGVDQAQVLLTSNSRDELASCLESDKNLSAGFLHLRRLLTATQTLFHPSNADRHTTGIASFAEALCEAFVRYLGRERV----GELPAGDEPFSVEDKRAFVATMLPLVSMGMYSKVRSVVHLAQVSIGQLAYVAPLTVADHFITLVAEALDPN-NLNQTHHAPAAIKMLTVLLQPLLQVRPVLAEALPEFLELTLPGIDSNDVFKTVTTSMFYQVVLSWIPI 1081
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: BLM10_mid (domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VBT5_9STRA) HSP 1 Score: 111 bits (278), Expect = 8.090e-24 Identity = 102/314 (32.48%), Postives = 144/314 (45.86%), Query Frame = 1
Query: 52 SLWGQVDHCPAWDGAWLTILCRA-----RKSTSAAFDWTPYMADIYSFARASIHTPVSMG---DAGSAPLMRGRPVAYQYQSFGPSASRRPAAMLKKLSKLMVFLLGKGGPPEQRTVSPGALYLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGEGVLRELGRPPSAGELSRDDAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALT-CMFRPLMHPRPYLAPYLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPVQGN 966
+LWG V+ WD WL + R R+ T W P++A I S + + + P +G G P + G G +S L SKL V LL +T LLSL L F+HPS+ G + + V YV L+ R+G + L P +++ L+ L +Y+K+ SV S ++ L ++ P+ AP+ E +L LDP A +N THQAP+AI ALT C L + PYLP IL+ TLPG+D ND KT+ TLQLY L ++PV
Sbjct: 207 TLWGSVNSFSEWDFHWLRLFARVVKHQQRRETFDISQWAPHLAFILSKIQQAFNLPSDLGATPSKGKFPTVLGG-------WHGDKSS------LYYASKLTVELL-----EASQTTHTLLQQLLSL---LTPFYHPSSAGNAASAISDFVYYVSAFLSLRLGRDKALHRQPELPHTSLVTK---------LVDLSFLGLYAKSQSVSSKASFTLRNAIAILPS-AAPSIVERILHGLDPSA-VNQTHQAPSAISALTVCGPALLRGDLSWTDPYLPLILQWTLPGIDPNDDAKTSRTLQLYSAWLMYMPVADE 488
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: BLM10_mid (domain-containing protein (Fragment) n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BYR2_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.520e-23 Identity = 107/317 (33.75%), Postives = 148/317 (46.69%), Query Frame = 1
Query: 52 SLWGQVDHCPAWDGAWLTILCRA-----RKSTSAAFDWTPYMADIYSFARASIHTPVSMG---DAGSAPLMRGRPVAYQYQSFGPSASRRPAAMLKKLSKLMVFLLGKGGPPEQRTVSPGALYLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGEGVLRELGRPPSAGELSRDDAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALT-CMFRPLMHPRPYLAPYLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPVQGNPVR 975
+LWG V+ WD WL + R R+ T W P++ I S + + + P +G G P + G G +S L SKL V LL +T LLSL L F+HPS+ G + + V YV L+ R+G + + L R P S LVA L+ L +Y+K+ SV S ++ L ++ P+ AP+ E +L LDP A +N THQAP+AI ALT C L + PYLP IL+ TLPG+D ND KT+ TLQLY L ++PV + R
Sbjct: 207 TLWGSVNSFSEWDFHWLRLFARVVKHQQRRETFDISQWAPHLTFILSKIQQAFNLPSDLGATPSKGKFPTVLGG-------WHGDKSS------LYYASKLTVELL-----EASQTTHTLLQQLLSL---LTPFYHPSSAGNAASAISDFVYYVSAFLSLRLGRD---KALHRQPELPHTS-----LVAKLV-DLSFLGLYAKSQSVSSKASFTLRNAIAILPS-AAPSIVERILHGLDPSA-VNQTHQAPSAISALTVCGPALLRGDLSWTDPYLPLILQWTLPGIDPNDDAKTSRTLQLYSAWLMYMPVADDTWR 491
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: BLM10_mid (domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZFJ1_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.010e-23 Identity = 102/317 (32.18%), Postives = 145/317 (45.74%), Query Frame = 1
Query: 52 SLWGQVDHCPAWDGAWLTILCRA-----RKSTSAAFDWTPYMADIYSFARASIHTPVSMG---DAGSAPLMRGRPVAYQYQSFGPSASRRPAAMLKKLSKLMVFLLGKGGPPEQRTVSPGALYLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGEGVLRELGRPPSAGELSRDDAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALT-CMFRPLMHPRPYLAPYLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPVQGNPVR 975
+LWG V+ WD WL + R R+ T W P++ I S + + + P +G G P + G G +S L SKL V LL +T LLSL L F+HPS+ G + + V YV L+ R+G + L P +++ L+ L +Y+K+ SV S ++ L ++ P+ AP+ E +L LDP A +N THQAP+AI ALT C L + PYLP IL+ TLPG+D ND KT+ TLQLY L ++PV + R
Sbjct: 207 TLWGSVNSFSEWDFHWLRLFARVVKHQQRRETFDISQWAPHLTFILSKIQQAFNLPSDLGATPSKGKFPTVLGG-------WHGDKSS------LYYASKLTVELL-----EASQTTHTLLQQLLSL---LTPFYHPSSAGNAASAISDFVYYVSAFLSLRLGRDKALHRQPELPHTSLVTK---------LVDLSFLGLYAKSQSVSSKASFTLRNAIAILPS-AAPSIVERILHGLDPSA-VNQTHQAPSAISALTVCGPALLRGDLSWTDPYLPLILQWTLPGIDPNDDAKTSRTLQLYSAWLMYMPVADDTWR 491
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: Uncharacterized (protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JTS7_GUITC) HSP 1 Score: 108 bits (271), Expect = 1.790e-22 Identity = 93/318 (29.25%), Postives = 152/318 (47.80%), Query Frame = 1
Query: 52 SLWGQVDHCPAWDGAWLTIL---CRARKSTSAAFDWTPYMADIYSFARASIHTPV---------SMGDAGSAPLMRGRPVAYQYQSFGPSASRRPAAM--LKKLSKLMVFLLGKGGPPEQRTVSPGALYLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGEGVLRELGRPPSAGELSRDDAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALTCMFRPLMHPRPYL--APYLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPV 957
S+WG V WD W+ +L CR T ++ DW ++ + S I PV +M + S+P G P Y SF R + + K +KL+++L GG + + R + ++ HPSNGG WT L ++ + + L RV E R++ S +L D +A L+LP+ L+ +YSK+++ S + L LASL P P L+ R D + ++ HQ +A+ AL + P++ + A ++P ++ELTL G+DSND+ KT TL+ Y ++L +P+
Sbjct: 211 SIWGWVVAYADWDLHWMVLLASLCRYTYRTRSS-DWKVFIPSLMSHILHIIDLPVGVSRIHIYGNMESSLSSP--EGSPF-YSLASFVHLDDNRTKILQLVHKSAKLIIYLQQPGGGEPLGMLG-------KIIRAIESYLHPSNGGYWTHRLSQLLASLCEYLMERVRAE---RDVADSESY-KLKPSDISNIARLILPVALQGLYSKSNTATLQSCVALKYLASLDPNNTLP---PLLDRISDALTTLTQVHQTSSALEALAAVIFPVIRAGNFESGAKHIPDLMELTLSGIDSNDLPKTWATLRFYTVLLSGLPL 510
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5T6_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.170e-22 Identity = 101/309 (32.69%), Postives = 145/309 (46.93%), Query Frame = 1
Query: 55 LWGQVDHCPAWDGAWLTILCRARKSTSA--AFD---WTPYMADIYSFARASIHTPVSMGDAGSAPLMRGRPVAYQYQSFGPSASRRPAAMLKKLSKLMVFLLGKGGPPEQRTVSPGALYLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGEGVLRELGRPPSAGELSRDDAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALTCMFRPLMHPRPYLAPYLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPVQGN 966
+W +V+ WD WL + R K A FD W P+ +++ + + P D G +P P A + A L +KL+V+ L P AL LL L L FFHPS+ G + +V Y+ L+ R G + + GR + L + L+ L VY+K+++V S ++ L + LS A APA E +LR LDP A+++ THQAP+AI ALT L+ A LPAIL LTLPG+D ND KT+ TLQLY L ++P+ +
Sbjct: 211 VWARVNTLLEWDLHWLRLFARVAKHQQARGTFDAATWAPHFPFLFAKIQHCLALP---SDMGPSPPRGTWPRALKGLHGDKHA-------LYYAAKLVVYTLSPASEPL-------ALQLLHL---LEPFFHPSSAGTAANAIADLVYYLSAFLSLRTGQD---QARGRALATTPL--------VNALVHLAFLGVYAKSTTVSSKASFTLRNVLCLSRA-TAPAIVEKLLRGLDP-AAVSQTHQAPSAIAALTTCGPALLRGDLVWAEALPAILHLTLPGVDPNDDTKTSRTLQLYSTWLMYLPLSND 486
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EFN2_HEMAN) HSP 1 Score: 105 bits (262), Expect = 1.910e-21 Identity = 95/313 (30.35%), Postives = 144/313 (46.01%), Query Frame = 1
Query: 55 LWGQVDHCPAWDGAWLTILCRARKST--SAAFDWTPYMADIYSFARASIHTPVSMG-----DA--GSAPLMRGRPVAYQYQSFGPSASR-RPAAMLKKLSKLMVFLLGKGGPPEQRTVSPGALYLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGEGVLRELGRPPSAGELSRDDAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALTCMFRPLMHPRPYLA--PYLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPV 957
LW V WD L +L K T S +W DI+S + PV DA GS P G P + F SR R ++K +KL+V+LL GG + L L + +F HPSN G WT L ++ + + RV E R G P + + D + ++LPL L+ +YSK++S S L L L + P + V +AL ++ HQ +A++AL + P++ + A +LPA+++LTL G+DSND+ KT TL+LY ++L +P+
Sbjct: 209 LWSWVTSYMDWDMMMLNVLSSLCKHTYISKGPEWESMTRDIFSRVLHIVDLPVGPSRIHIYDAREGSLPAGDGYP-RFSLSVFVTKGSRTRVVHNVRKCAKLIVYLLPPGGGLAWQL-------LAKLMNSVESFMHPSNHGYWTHRLSDLLCALCENFYKRVSTE---RLKGIEPC---VLKTDVEEFSRIMLPLALQGLYSKSASASLQSCTALKFLGMLDASNALPPLLDQVYQALT---TLTEVHQTTSAMQALAAVVFPMVKSENFSAGAEHLPALMQLTLDGIDSNDLHKTWTTLRLYTVLLSGLPL 504
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F3H2_9CRYP) HSP 1 Score: 102 bits (255), Expect = 2.010e-20 Identity = 86/322 (26.71%), Postives = 147/322 (45.65%), Query Frame = 1
Query: 52 SLWGQVDHCPAWDGAWL---TILCRA--RKSTSAAFDWTPYMADIYSFARASIHTPVSMGDAGSAPLMRGRPVAYQYQSFGPSAS-----------RRPAAMLKKLSKLMVFLL-GKGGPPEQRTVSPGAL-YLLSLFRGLRTFFHPSNGGLWTTELGLVVNYVLKGLASRVGGEGVLRELGRPPSAGELSRDDAGLVADLLLPLVLEMVYSKNSSVGSLSNMCLSTLASLSPARVAPAAAELVLRALDPVASINHTHQAPAAIRALTCMFRPLMHPRPYLAP--YLPAILELTLPGLDSNDVFKTTVTLQLYHLILCWIPV 957
S+W + WD WL + +CR ++ TS W ++ IY+ + PV L + + Y P S + ++ K +KL+V+L+ + GP + + YL L +G+ TF HPSNGG WT L ++ + + L RV E +L + L + D +++ PL + +YSK+S+ S L L+ L P + + +AL ++ HQ AA+ AL+ + P + + + A ++PA+L LTL G+D+ND+ KT TL+ Y ++L +P+
Sbjct: 236 SMWSWIVTYSDWDLHWLQAISSICRHTYKEHTSR---WIKHIPLIYAHVLHLLDIPVG---PSRIRLYENKETSISYSDGYPMCSLSVFVHKGETRSKSLQIVNKAAKLLVYLMYPREGPDNPSDIEHDPMTYLRRLAKGIETFLHPSNGGYWTRRLSQLIASLCEHLFDRVTNE----KLDESANRYSLKKSDISEFVEIVKPLAFQGLYSKSSTTVMHSCTALKMLSLLDADSTLPPLLDRLYQALT---TLTEVHQTSAALDALSAVIHPTLQIQNFSAGINHIPALLNLTLTGIDTNDMRKTWSTLRFYTILLSGLPL 544 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7592.1.2 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7592.1.2 >prot_H-canaliculatus_M_contigs7592.1.2 ID=prot_H-canaliculatus_M_contigs7592.1.2|Name=mRNA_H-canaliculatus_M_contigs7592.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=326bp PIFCFASYDPGPPPCFSSLWGQVDHCPAWDGAWLTILCRARKSTSAAFDWback to top mRNA from alignment at H-canaliculatus_M_contigs7592:683..2050- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7592.1.2 ID=mRNA_H-canaliculatus_M_contigs7592.1.2|Name=mRNA_H-canaliculatus_M_contigs7592.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1368bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7592:683..2050- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7592:683..2050- >mRNA_H-canaliculatus_M_contigs7592.1.2 ID=mRNA_H-canaliculatus_M_contigs7592.1.2|Name=mRNA_H-canaliculatus_M_contigs7592.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=978bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7592:683..2050- (Hapterophycus canaliculatus Oshoro7m male)back to top |