mRNA_H-canaliculatus_M_contigs7591.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI) HSP 1 Score: 155 bits (393), Expect = 1.000e-38 Identity = 80/161 (49.69%), Postives = 101/161 (62.73%), Query Frame = 2
Query: 2 MYQSRFFDGEKSRPGRPCYGCSTHYHYVSR-PESPEAWHGAKMVHSDITEMLANIFISKAVGSKAALHEKEGRFPAANESALEEHPQ----FQVCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGSAWGGSTCPKWCKGKDVSFKAGNRI----VRIC 457
MYQ R F+ E+SR G CYGCS HYHYVS P SPEA+ GAKMVHS +TEMLAN+ I++AVG+KAAL E+ G + S EE F++C DCPA L+P HVK P L C + +L G+A+VG AW CP WC ++ +A VR+C
Sbjct: 464 MYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPEAYGGAKMVHSAVTEMLANVLITRAVGTKAALRERAGTHSSDVTSTAEERQADTRTFELCTDCPATLIPLHVKPSPLLKCDTVSALPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 624
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI) HSP 1 Score: 139 bits (349), Expect = 4.980e-33 Identity = 73/161 (45.34%), Postives = 97/161 (60.25%), Query Frame = 2
Query: 2 MYQSRFFDGEKSRPGRPCYGCSTHYHYVSRPES-PEAWHGAKMVHSDITEMLANIFISKAVGSKAALHEKEGRFPAAN-ESALEEHPQFQVCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGSAWGGSTCPKWCKGK----DVSFKAGNRIVRICPLR 466
MYQ++FF+ E S+ G YG + HYHY+S S PEA +G+ MVHS +TEMLAN+ I +AV +KAAL K N + + FQVC+DCP L+PFHVK +PD C + SL GDA VG W G CP WC + ++ ++G VR C L+
Sbjct: 375 MYQAKFFENEGSKQGTRRYGGNIHYHYISSAASNPEAHNGSIMVHSTMTEMLANVMIGRAVETKAALFAKAAASTDVNKQERADVGKSFQVCSDCPRDLMPFHVKPIPDPICETAESLRGDAQVGEVWNGELCPDWCMKQAPVSQLATQSGPVDVRECSLK 535
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI) HSP 1 Score: 129 bits (324), Expect = 1.540e-29 Identity = 72/160 (45.00%), Postives = 93/160 (58.13%), Query Frame = 2
Query: 2 MYQSRFFDGEKSRPGRPCYGCSTHYHYVSRPES-PEAWHGAKMVHSDITEMLANIFISKAVGSKAALHEKEGRFPAANESALEE-HPQFQVCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGSAWGGSTCPKWC-KGKDVSFK---AGNRIVRICPL 463
MYQ++ F+ E+SR G YG S HYHY+S S PEA +G MVHS +TEMLANI + +AV +KA L+ K +E + FQVC+DCP ++LP HVK +P+ C SL G+A G W G CP WC K VS K +G VR C +
Sbjct: 388 MYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMLGQAVETKAELYAKAAASTGGSEQERADVGKSFQVCSDCPRQMLPVHVKPIPEPVCEIVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSI 547
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.750e-29 Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 2
Query: 2 MYQSRFFDGEKSRPGRPCYGCSTHYHYVSRPES-PEAWHGAKMVHSDITEMLANIFISKAVGSKAALHEKEGRFP-AANESALEEHPQFQVCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGSAWGGSTCPKWC 406
MYQ++ F+ E+S+ G + S H+HYVS S PE +G MVHS ITEMLAN+ I +AV +KA L+ K + E FQVC+DCP+ LLPFHVKA+P+ C +SL GDA G AW GS CP WC
Sbjct: 349 MYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEFGKAFQVCSDCPSALLPFHVKAIPESVCEIVQSLPGDAKTGEAWPGSLCPDWC 485
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI) HSP 1 Score: 123 bits (309), Expect = 4.430e-28 Identity = 68/162 (41.98%), Postives = 92/162 (56.79%), Query Frame = 2
Query: 2 MYQSRFFDGEKSRPGRPCYGCSTHYHYVSRPES-PEAWHGAKMVHSDITEMLANIFISKAVGSKAALHEKEGRFP-AANESALEEHPQFQVCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGSAWGGSTCPKWC-KGKDVS-FKAGNRIVRICPLRGSS 475
MYQ++ F+ +KSR G + S H+H+VS S PE +G MVHS ITEMLAN+ + +AV +KA L+ K + + E FQVC+DCP LLPFHVK +P+ C SL G A G W G CP WC K VS K + +V++ G++
Sbjct: 257 MYQAKLFENQKSRNGLRRFAASQHFHFVSTDASAPETRNGTIMVHSTITEMLANVMVGRAVETKAKLYAKAAASTDEIRKISAEVGKSFQVCSDCPGSLLPFHVKGIPEPVCDIVESLPGQAKTGEVWSGDLCPDWCMKQAPVSQTKTESDVVKVRECGGNT 418
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE) HSP 1 Score: 125 bits (314), Expect = 5.100e-28 Identity = 73/165 (44.24%), Postives = 96/165 (58.18%), Query Frame = 2
Query: 2 MYQSRFFDGEKSRPGRPCYGCSTHYHYVSRPES-PEAWHGAKMVHSDITEMLANIFISKAVGSKAALHEKEGRFPAANESALEE-----HPQFQVCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGSAWGGSTCPKWC-KGKDVSFKAGNRIV---RICPLR 466
MYQ++ F+ E SR G + S H+HY+S+ S PE +G MVHS ITEMLAN+ + +AV +KA+LH K AA++ +++ FQVC DCP LLPFHVK +P+ C SL G A +G W GS CP WC K + VS K V R+C R
Sbjct: 452 MYQAKLFENEGSRNGIRRFAGSQHFHYISKETSAPETRNGTIMVHSTITEMLANVILGRAVETKASLHAKA----AASKDEIQKLSSEVGKSFQVCWDCPGTLLPFHVKPIPEPVCEILESLPGGAKMGDVWSGSLCPDWCMKQEPVSQKNTQSDVVDVRMCSAR 612
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.000e-26 Identity = 70/162 (43.21%), Postives = 90/162 (55.56%), Query Frame = 2
Query: 2 MYQSRFFDGEKSRPGRPC---YGCSTHYHYVSRPES-PEAWHGAKMVHSDITEMLANIFISKAVGSKAALHEKEGRFP-AANESALEEHPQFQVCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGSAWGGSTCPKWCKGK----DVSFKAGNRIVRICP 460
MYQ++ F+ E+S G + S H+HYVS S PE +G MVHS ITEMLAN+ I +AV +KA L+ K + + E FQVC+DCP+ LLPFHVKA+P+ C SL G A G W GS CP WC + ++G VR CP
Sbjct: 374 MYQAKLFENEESNNGINGVRRFAASHHFHYVSSDASAPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWAGSLCPDWCMKQAPMSQSKTESGVVEVRRCP 535
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE) HSP 1 Score: 116 bits (291), Expect = 4.380e-25 Identity = 67/156 (42.95%), Postives = 86/156 (55.13%), Query Frame = 2
Query: 2 MYQSRFFDGEKSRPGRPCYGCSTHYHYVSRPES-PEAWHGAKMVHSDITEMLANIFISKAVGSKAALHEKEGR---------------FPAANESALEEHPQFQ-----VCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGSAWGGSTCPKWC 406
MYQ++ F+ E+S+ G + S H+HYVS S PE +G MVHS ITEMLAN+ I +AV +KA L+ K F A ++ + QFQ VC+DCP+ LLPFHVKA+P+ C SL G A G AW G CP WC
Sbjct: 370 MYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEVGKSFQA--KAGTRRNGQFQREFVTVCSDCPSSLLPFHVKAIPESVCEIVESLPGHAKTGEAWPGDLCPDWC 523
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 5.280e-18 Identity = 50/99 (50.51%), Postives = 61/99 (61.62%), Query Frame = 2
Query: 161 IFISKAVGSKAALHEKEGRFPAANESALEEHPQFQVCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGSAWGGSTCPKWCKGKDVSFKAGNRIVRIC 457
I ISKAVGSKAAL+EK P+ N + F+VC DCPA L+P HVK VP C + LAGDA+VG AWGG CP+WC + V + VR+C
Sbjct: 359 IVISKAVGSKAALYEKAT--PSTNTHRGGGNEIFEVCTDCPASLIPHHVKPVPVPVCNATSVLAGDAAVGEAWGGRGCPQWCSKEPVDGVLNLKDVRVC 455
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LPS5_STIJA) HSP 1 Score: 59.3 bits (142), Expect = 5.170e-6 Identity = 41/123 (33.33%), Postives = 59/123 (47.97%), Query Frame = 2
Query: 116 GAKMVHSDITEMLANIFISKAVGSKAALHEKEGRFPAANESALEEHP-QFQVCADCPAKLLPFHVKAVPDLACVSERSLAGDASVGS-AWGGSTCPKWC-KGKDVSFK---AGNRIVRICPLR 466
G V + TEM+A + + K + + K+ A P Q +VC DCPA LLPFH+K +PDL C S+ + V W G+ CP C K K V + +G+ VR C ++
Sbjct: 366 GEMTVCGNPTEMIAQMLLGKVIAPEG----KDAWLKAITSKPKIMLPRQLKVCQDCPASLLPFHIKPIPDLTCYVSESVRETSLVKQEVWDGTLCPAECLKLKPVGTEQTQSGSVSVRSCNVK 484 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7591.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7591.1.1 >prot_H-canaliculatus_M_contigs7591.1.1 ID=prot_H-canaliculatus_M_contigs7591.1.1|Name=mRNA_H-canaliculatus_M_contigs7591.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=162bp MYQSRFFDGEKSRPGRPCYGCSTHYHYVSRPESPEAWHGAKMVHSDITEMback to top mRNA from alignment at H-canaliculatus_M_contigs7591:2347..3888+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7591.1.1 ID=mRNA_H-canaliculatus_M_contigs7591.1.1|Name=mRNA_H-canaliculatus_M_contigs7591.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1542bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7591:2347..3888+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7591:2347..3888+ >mRNA_H-canaliculatus_M_contigs7591.1.1 ID=mRNA_H-canaliculatus_M_contigs7591.1.1|Name=mRNA_H-canaliculatus_M_contigs7591.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=486bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7591:2347..3888+ (Hapterophycus canaliculatus Oshoro7m male)back to top |