mRNA_H-canaliculatus_M_contigs75894.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs75894.1.1
Unique NamemRNA_H-canaliculatus_M_contigs75894.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: ADK_lid (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q1_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 2.930e-14
Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKV 108
            DDVVVGIV+EAMEAPECKKGFILDGFPRTT QAEK+
Sbjct:   83 DDVVVGIVSEAMEAPECKKGFILDGFPRTTAQAEKL 118
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BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: adenylate (kinase 4 isoform X2 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9B916)

HSP 1 Score: 66.6 bits (161), Expect = 3.510e-12
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKVGSSDYRR 129
            DD+VVGI+NEA+E P C+KGFILDGFPRT VQAEK+     RR
Sbjct:   68 DDLVVGIINEALEKPSCQKGFILDGFPRTVVQAEKLDEMLKRR 110
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BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: Adenylate (kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEX0_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.510e-12
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKV 108
            DDVVVGI++EA++APECKKGFILDGFPRT  QAEK+
Sbjct:   89 DDVVVGIISEAIQAPECKKGFILDGFPRTVPQAEKL 124
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BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: Adenylate (kinase n=8 Tax=asterids TaxID=71274 RepID=A0A2J6KPV0_LACSA)

HSP 1 Score: 66.6 bits (161), Expect = 4.780e-12
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKVGSSDYRR 129
            DD+VVGI+NEA+E P C+KGFILDGFPRT VQAEK+     RR
Sbjct:   93 DDLVVGIINEALEKPSCQKGFILDGFPRTVVQAEKLDEMLKRR 135
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: Adenylate (kinase n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CQY4_AQUCA)

HSP 1 Score: 64.7 bits (156), Expect = 6.660e-12
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKV 108
            DD+VVGI++EAM+ P C+KGFILDGFPRT VQAEKV
Sbjct:   92 DDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAEKV 127
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BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: Adenylate (kinase n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DIU3_VITVI)

HSP 1 Score: 63.5 bits (153), Expect = 6.770e-12
Identity = 27/36 (75.00%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKV 108
            DD+VVGI++EAM+ P C+KGFILDGFPRT VQAEK+
Sbjct:   22 DDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAEKL 57
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BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: Adenylate (kinase n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067ENU9_CITSI)

HSP 1 Score: 64.3 bits (155), Expect = 6.930e-12
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKVGSS 117
            DD+VVGI++EAM+ P C+KGFILDGFPRT VQA+KV  S
Sbjct:   93 DDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKVSPS 131
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: Adenylate (kinase n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WCY4_THATH)

HSP 1 Score: 65.1 bits (157), Expect = 7.500e-12
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKV 108
            DD+VVGI++EAM+ P CKKGFILDGFPRT VQAEK+
Sbjct:   28 DDLVVGIIDEAMKKPSCKKGFILDGFPRTVVQAEKL 63
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: Adenylate (kinase (Fragment) n=1 Tax=Opalina sp. OP10 TaxID=2666322 RepID=A0A649UZJ9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.000e-11
Identity = 25/36 (69.44%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKV 108
            DD+V+GI+NE ++ P+C KGFILDGFPRTT+QAEK+
Sbjct:   34 DDIVIGIINENLDRPDCSKGFILDGFPRTTLQAEKL 69
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Match: Adenylate (kinase (Fragment) n=2 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A1J6JMZ4_NICAT)

HSP 1 Score: 62.4 bits (150), Expect = 1.840e-11
Identity = 26/36 (72.22%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKV 108
            DD+VVGI++EA++ P C+KGFILDGFPRT VQAEK+
Sbjct:    6 DDLVVGIIDEALKKPSCQKGFILDGFPRTVVQAEKL 41
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75894.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ADK_lid2.930e-1491.67domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
adenylate3.510e-1269.77kinase 4 isoform X2 n=1 Tax=Lactuca sativa TaxID=4... [more]
Adenylate4.510e-1280.56kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
Adenylate4.780e-1269.77kinase n=8 Tax=asterids TaxID=71274 RepID=A0A2J6KP... [more]
Adenylate6.660e-1277.78kinase n=1 Tax=Aquilegia coerulea TaxID=218851 Rep... [more]
Adenylate6.770e-1275.00kinase n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0... [more]
Adenylate6.930e-1271.79kinase n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0... [more]
Adenylate7.500e-1277.78kinase n=1 Tax=Thalictrum thalictroides TaxID=4696... [more]
Adenylate1.000e-1169.44kinase (Fragment) n=1 Tax=Opalina sp. OP10 TaxID=2... [more]
Adenylate1.840e-1172.22kinase (Fragment) n=2 Tax=Nicotiana attenuata TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75894contigH-canaliculatus_M_contigs75894:5..133 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FV44
Preferred nameADK1
PFAMsADK,ADK_lid
Model size129
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K00939
KEGG ReactionR00127,R01547,R11319
KEGG Pathwayko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130
KEGG ModuleM00049
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000166,GO:0000287,GO:0001889,GO:0002244,GO:0002376,GO:0002520,GO:0002521,GO:0003674,GO:0003824,GO:0004017,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005758,GO:0005773,GO:0005774,GO:0005829,GO:0005929,GO:0006091,GO:0006119,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006166,GO:0006172,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006412,GO:0006518,GO:0006629,GO:0006644,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009144,GO:0009150,GO:0009151,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009199,GO:0009200,GO:0009205,GO:0009215,GO:0009259,GO:0009260,GO:0009262,GO:0009394,GO:0009719,GO:0009725,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010467,GO:0010646,GO:0010648,GO:0015949,GO:0015950,GO:0015951,GO:0016020,GO:0016070,GO:0016208,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019538,GO:0019637,GO:0019692,GO:0019693,GO:0019866,GO:0023051,GO:0023057,GO:0030097,GO:0030154,GO:0030554,GO:0031090,GO:0031514,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032878,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0036126,GO:0042221,GO:0042278,GO:0042451,GO:0042455,GO:0042995,GO:0043043,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043174,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044437,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0046031,GO:0046033,GO:0046034,GO:0046060,GO:0046083,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046686,GO:0046872,GO:0046914,GO:0046940,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0048863,GO:0048869,GO:0050145,GO:0050789,GO:0050794,GO:0050896,GO:0055086,GO:0060218,GO:0060322,GO:0061008,GO:0065007,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0090036,GO:0090038,GO:0090304,GO:0090407,GO:0097066,GO:0097159,GO:0097223,GO:0097226,GO:0097367,GO:0097729,GO:0098588,GO:0098805,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1902531,GO:1902532,GO:2000114
Exons1
Evalue4.8e-15
EggNOG OGsCOG0563@1|root,KOG3078@2759|Eukaryota
EC2.7.4.3
Descriptionadenylate kinase activity
Cds size129
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854096.2269855-CDS-H-canaliculatus_M_contigs75894:4..1331696854096.2269855-CDS-H-canaliculatus_M_contigs75894:4..133Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs75894 5..133 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75894.1.1prot_H-canaliculatus_M_contigs75894.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs75894 5..133 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs75894.1.1

>prot_H-canaliculatus_M_contigs75894.1.1 ID=prot_H-canaliculatus_M_contigs75894.1.1|Name=mRNA_H-canaliculatus_M_contigs75894.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=43bp
DDVVVGIVNEAMEAPECKKGFILDGFPRTTVQAEKVGSSDYRR
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mRNA from alignment at H-canaliculatus_M_contigs75894:5..133+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs75894.1.1 ID=mRNA_H-canaliculatus_M_contigs75894.1.1|Name=mRNA_H-canaliculatus_M_contigs75894.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=129bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75894:5..133+ (Hapterophycus canaliculatus Oshoro7m male)
GATGACGTGGTTGTCGGGATCGTGAACGAGGCTATGGAGGCGCCCGAGTG
CAAGAAGGGCTTCATCCTCGACGGCTTCCCGCGTACGACAGTACAGGCGG
AAAAGGTGGGTAGCTCGGATTACCGCCGT
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75894:5..133+

>mRNA_H-canaliculatus_M_contigs75894.1.1 ID=mRNA_H-canaliculatus_M_contigs75894.1.1|Name=mRNA_H-canaliculatus_M_contigs75894.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=129bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75894:5..133+ (Hapterophycus canaliculatus Oshoro7m male)
GATGACGTGGTTGTCGGGATCGTGAACGAGGCTATGGAGGCGCCCGAGTG
CAAGAAGGGCTTCATCCTCGACGGCTTCCCGCGTACGACAGTACAGGCGG
AAAAGGTGGGTAGCTCGGATTACCGCCGT
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