mRNA_H-canaliculatus_M_contigs75862.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs75862.1.1
Unique NamemRNA_H-canaliculatus_M_contigs75862.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: FkbM (family methyltransferase n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848UAL6_9GAMM)

HSP 1 Score: 147 bits (371), Expect = 7.460e-42
Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = 1
Query:    1 GTAGEGRHSIATDKGATDSILVKLSTMSQFAEENGRFPTVVKIDVEGAEGQVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPAGEPIHDWLEARGYTMAWSNKRRSGEHRHY 336
            G+ GEGRHSIA+ KGATD I V+L+TM+ F +  G  P ++KIDVEGAEGQVLAGM+ L+   PP ++F+E+HPKGD D MP G+ I DW+E  GY + W+N R SGEHRHY
Sbjct:  134 GSEGEGRHSIASSKGATDVISVELTTMADFCKRQGIRPDIIKIDVEGAEGQVLAGMQGLLQYAPPADVFLEVHPKGDTDLMPDGQSIQDWMEHHGYALVWNNVRGSGEHRHY 245          
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: Methyltransf_21 (domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HIP2_9BACT)

HSP 1 Score: 137 bits (344), Expect = 7.020e-38
Identity = 70/113 (61.95%), Postives = 80/113 (70.80%), Query Frame = 1
Query:    1 GTAGEGRHSIATDKGATDSILVKLSTMSQFAEENGRFPTVVKIDVEGAEGQVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPAGEPIHDWLEARGYTMAWSNKRRSGEHRHYR 339
            G AGEGRHSI   +G+T SI V +   + FA E G  PTVVKIDVEGAEGQVLAG   L+ + PPR+ F+EIH KGD D MP G  I  WL  RGY +AWS+ RRSGEHRHYR
Sbjct:  134 GKAGEGRHSITEARGSTASIRVPVRRAAAFAAECGEAPTVVKIDVEGAEGQVLAGFADLLASAPPRDFFLEIHSKGDHDRMPDGVTIGAWLGERGYDLAWSSARRSGEHRHYR 246          
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: 31-O-demethyl-FK506 (methyltransferase FkbM n=1 Tax=Lacunisphaera limnophila TaxID=1838286 RepID=A0A1D8AVC4_9BACT)

HSP 1 Score: 132 bits (333), Expect = 5.330e-36
Identity = 66/112 (58.93%), Postives = 79/112 (70.54%), Query Frame = 1
Query:    1 GTAGEGRHSIATDKGATDSILVKLSTMSQFAEENGRFPTVVKIDVEGAEGQVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPAGEPIHDWLEARGYTMAWSNKRRSGEHRHY 336
            G+ G+GRHSIA  KGA  SI VKLST + FA+  G+ P V+KID+EGAEG++LAG E L+    PREI ME+H KG  D MP G  I  WL+ARGY +AW   RRSG HRHY
Sbjct:  154 GSTGDGRHSIAETKGAEGSISVKLSTATTFAQTTGQPPDVIKIDIEGAEGEMLAGAEGLIATGRPREIIMEVHNKGGRDLMPDGTTIDAWLKARGYVLAWEQHRRSGVHRHY 265          
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A651DN97_9BACT)

HSP 1 Score: 87.0 bits (214), Expect = 2.680e-20
Identity = 44/73 (60.27%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  145 EGQVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPA-----GEP---IHDWLEARGYTMAWSNKRRSGEHRHYR 339
            EGQVLAGM  L++   PREIF+E+HPKGD D MPA     G P   I +WL ARGY +AW++ R SGEHRHYR
Sbjct:    1 EGQVLAGMASLIEERRPREIFLELHPKGDEDHMPAVVAPEGGPAPTIDEWLTARGYELAWADPRGSGEHRHYR 73          
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: FkbM (family methyltransferase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C5ZHC7_9BACT)

HSP 1 Score: 68.2 bits (165), Expect = 3.950e-11
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   16 GRHSIA-TDKGATDSILVKLSTMSQFAEENGRFPTVVKIDVEGAEGQVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPAG---EPIHDWLEARGYTMAWSNKRRSGEHRHY 336
            G H+IA T      SI ++L ++   A      PTV+KIDVEGAE +VL G E+ +     RE+F+E+H    G     G   + +  WLEARG+ + WS  R +  H+HY
Sbjct:  204 GSHAIARTQATGGRSIRIELDSVDNRARVGEAVPTVMKIDVEGAEMEVLLGGERTIAAGRVRELFIEVHA---GRIFTEGFDPQRMQSWLEARGFELVWSRPRGTEIHQHY 311          
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: FkbM (family methyltransferase n=2 Tax=Haloquadratum walsbyi TaxID=293091 RepID=G0LM71_HALWC)

HSP 1 Score: 64.7 bits (156), Expect = 5.100e-10
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 1
Query:   10 GEGRHSIATDKGATDSILVKLSTMSQFAEENGRFP--TVVKIDVEGAEGQVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPAGEPIHDWLEARGYTMA 297
            GEG+HS+AT K A+++I +KL+T  +  E NG  P  T++K+DVEGAEG+V AGM  ++     R  ++E+HP    +       I   LE  G+ +A
Sbjct:  156 GEGKHSLATGK-ASETIEIKLTTGDRLVE-NGSVPQPTILKVDVEGAEGRVFAGMHSILSRSACRICYVEVHPDRLKEYSDTESDIVTTLEDCGFDVA 251          
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: FkbM (family methyltransferase n=1 Tax=Halobacterium noricense TaxID=223182 RepID=UPI001E325BC2)

HSP 1 Score: 62.0 bits (149), Expect = 1.990e-9
Identity = 43/105 (40.95%), Postives = 59/105 (56.19%), Query Frame = 1
Query:    7 AGEGRHSIATDKGATDSILVKLSTMSQFAEENGR-FPTVVKIDVEGAEGQVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPAGEPIHDWLEARGYTMAWSNKRRS 318
            AGEG H+IATD  +  SI V+ +  +   EE G   PTVVKIDVEGAE  VL GME ++     R +++E+HP    +       +   LE  G+T+    +RRS
Sbjct:   75 AGEGEHAIATDSDSK-SIEVQTARGNSIIEERGLPMPTVVKIDVEGAELSVLRGMEHVLQKSC-RLVYVEVHPDKLENFNSKPSEVESILEDAGFTINKLTQRRS 177          
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: Methyltransf_21 (domain-containing protein n=2 Tax=Halobiforma lacisalsi TaxID=229731 RepID=M0L2A7_HALLS)

HSP 1 Score: 60.8 bits (146), Expect = 1.330e-8
Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 1
Query:    7 AGEGRHSIATDKGATDSILVKLSTMSQFAEENGR-FPTVVKIDVEGAEGQVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPAGEPIHDWLEARGYTMAWSNKRRS 318
            AGEG H IATD+  T++I VK++      + +G   PTV+KIDVEGAE  VL G+ +   NH  R  ++E+HP+       +   +H +LE  G+ +   + R S
Sbjct:  158 AGEGEHMIATDQ-ETETIEVKMARGDTIIDRHGLPNPTVMKIDVEGAEMLVLRGLSETFRNHV-RLAYIEVHPEKLPKFGDSASEVHVFLEESGFDVTKISSRGS 260          
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: FkbM (family methyltransferase n=1 Tax=Natronorubrum halophilum TaxID=1702106 RepID=UPI001EE81124)

HSP 1 Score: 58.2 bits (139), Expect = 1.330e-7
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 1
Query:   10 GEGRHSIATDKGATDSILVKLSTMSQFAEENGR-FPTVVKIDVEGAEGQVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPAGEPIHDWLEARGYTMAWSNKRRS 318
            GEG HSIAT++  T +I V+ +      ++ G   PTVVKIDVEGAE  VL G+ K +  H  R I++E+H +           +  +LE  G+++A   +RRS
Sbjct:  168 GEGEHSIATEEDTT-TIEVETARGDSIIKQRGLPKPTVVKIDVEGAEMSVLRGLRKTISKHV-RLIYVEVHSEKLSYYGDTSSEVRMFLEEAGFSIAEIPQRRS 269          
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Match: FkbM (family methyltransferase n=1 Tax=Moorena sp. SIO4G3 TaxID=2607821 RepID=A0A845WH48_9CYAN)

HSP 1 Score: 56.2 bits (134), Expect = 4.190e-7
Identity = 31/89 (34.83%), Postives = 52/89 (58.43%), Query Frame = 1
Query:   58 ILVKLSTM-SQFAEENGRFPTVVKIDVEGAEGQVLAGMEKLMDNH---PPREIFMEIHPKGDGDAMPAGEPIHDWLEARGYTMAWSNKR 312
            + V+  T+ ++ +  N   PTV+KID+EGAE   L G E L++      PR IF+E+HP+       + + +H+++   GY++AW  KR
Sbjct:  115 VTVQTRTLDNEISIGNLPLPTVLKIDIEGAEVLCLHGAESLLNGSLGKKPRLIFLELHPEFLPSFGASADEVHNFVLRHGYSVAWEQKR 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75862.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
FkbM7.460e-4259.82family methyltransferase n=1 Tax=Granulosicoccus s... [more]
Methyltransf_217.020e-3861.95domain-containing protein n=1 Tax=Planctomycetes b... [more]
31-O-demethyl-FK5065.330e-3658.93methyltransferase FkbM n=1 Tax=Lacunisphaera limno... [more]
Uncharacterized2.680e-2060.27protein (Fragment) n=1 Tax=Gemmatimonadales bacter... [more]
FkbM3.950e-1138.74family methyltransferase n=1 Tax=Phycisphaerae bac... [more]
FkbM5.100e-1039.80family methyltransferase n=2 Tax=Haloquadratum wal... [more]
FkbM1.990e-940.95family methyltransferase n=1 Tax=Halobacterium nor... [more]
Methyltransf_211.330e-838.10domain-containing protein n=2 Tax=Halobiforma laci... [more]
FkbM1.330e-738.46family methyltransferase n=1 Tax=Natronorubrum hal... [more]
FkbM4.190e-734.83family methyltransferase n=1 Tax=Moorena sp. SIO4G... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75862contigH-canaliculatus_M_contigs75862:3..353 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog358396.C445_21071
PFAMsMethyltransf_21
Model size351
Max annot lvl183963|Halobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.18e-09
EggNOG OGsCOG0500@1|root,arCOG01402@2157|Archaea,2XYWP@28890|Euryarchaeota,23WPJ@183963|Halobacteria
DescriptionCOG0500 SAM-dependent methyltransferases
Cds size351
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854096.0145826-CDS-H-canaliculatus_M_contigs75862:2..3531696854096.0145826-CDS-H-canaliculatus_M_contigs75862:2..353Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs75862 3..353 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75862.1.1prot_H-canaliculatus_M_contigs75862.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs75862 3..353 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs75862.1.1

>prot_H-canaliculatus_M_contigs75862.1.1 ID=prot_H-canaliculatus_M_contigs75862.1.1|Name=mRNA_H-canaliculatus_M_contigs75862.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=117bp
GTAGEGRHSIATDKGATDSILVKLSTMSQFAEENGRFPTVVKIDVEGAEG
QVLAGMEKLMDNHPPREIFMEIHPKGDGDAMPAGEPIHDWLEARGYTMAW
SNKRRSGEHRHYRHSA*
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mRNA from alignment at H-canaliculatus_M_contigs75862:3..353+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs75862.1.1 ID=mRNA_H-canaliculatus_M_contigs75862.1.1|Name=mRNA_H-canaliculatus_M_contigs75862.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=351bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75862:3..353+ (Hapterophycus canaliculatus Oshoro7m male)
GGCACAGCCGGAGAAGGCCGACATTCCATTGCGACCGACAAAGGCGCAAC GGACAGTATTCTGGTCAAGTTATCCACCATGAGCCAGTTTGCGGAAGAAA ATGGACGTTTCCCGACGGTTGTAAAAATTGATGTTGAAGGTGCGGAAGGT CAGGTGCTGGCAGGTATGGAGAAACTTATGGACAATCATCCACCACGAGA AATTTTCATGGAAATTCATCCTAAAGGTGACGGAGATGCCATGCCGGCGG GCGAACCAATCCATGACTGGCTTGAGGCACGCGGTTATACAATGGCCTGG AGTAACAAACGTCGTTCTGGTGAGCATCGTCATTATCGACATAGCGCTTA G
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75862:3..353+

>mRNA_H-canaliculatus_M_contigs75862.1.1 ID=mRNA_H-canaliculatus_M_contigs75862.1.1|Name=mRNA_H-canaliculatus_M_contigs75862.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=351bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75862:3..353+ (Hapterophycus canaliculatus Oshoro7m male)
GGCACAGCCGGAGAAGGCCGACATTCCATTGCGACCGACAAAGGCGCAAC
GGACAGTATTCTGGTCAAGTTATCCACCATGAGCCAGTTTGCGGAAGAAA
ATGGACGTTTCCCGACGGTTGTAAAAATTGATGTTGAAGGTGCGGAAGGT
CAGGTGCTGGCAGGTATGGAGAAACTTATGGACAATCATCCACCACGAGA
AATTTTCATGGAAATTCATCCTAAAGGTGACGGAGATGCCATGCCGGCGG
GCGAACCAATCCATGACTGGCTTGAGGCACGCGGTTATACAATGGCCTGG
AGTAACAAACGTCGTTCTGGTGAGCATCGTCATTATCGACATAGCGCTTA
G
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