mRNA_H-canaliculatus_M_contigs7584.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7584.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7584.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 6.400e-147
Identity = 207/218 (94.95%), Postives = 214/218 (98.17%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            QPYLEQGDGPIVLV+APTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKR QV DL RGVEIVIATPGRLIDLLE+GKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSL+LSANKDIQQ+IEIVEDFGKYR+L+KHLQ+ HNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ
Sbjct:   88 QPYLEQGDGPIVLVIAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRSQVYDLSRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQE-HNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 304
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: DEAD (box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 1.440e-127
Identity = 187/218 (85.78%), Postives = 200/218 (91.74%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFG SS+IKNTCVYGGVPKR+QVNDL RGVEIVIATPGRLIDLLE+GKTNLRRVTYLVLDEADRMLDMGFEPQIR IVSQIRPDRQTLMWSATWPKEV+ LARDFL +YYQVTVGSL+L+ANKDI+QIIE  EDF KYR L KHLQQ H + G+VL+FVETKKGCDALTRSLR +G+ A  IHGDK Q
Sbjct:  191 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQ-HGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQ 407
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: DEAD (box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 362 bits (930), Expect = 4.440e-122
Identity = 179/218 (82.11%), Postives = 195/218 (89.45%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            QPYL+ GDGPIVLVVAPTRELAVQIK ECDKFG SS IKNTCVYGGVPKR QV DLQRGVEIVIATPGRLID LE+GKTNLRRVTYLVLDEADRMLDMGFEPQIR IV QIRPDRQTLMWSATWPKEV+ LARDFL NYYQVTVGSLDLSANKDI+Q +E++ED+ KY  L+++L++ HN+ GRVLIFVETKKG D L RSLR +GWPA +IHGDK Q
Sbjct:  126 QPYLQPGDGPIVLVVAPTRELAVQIKVECDKFGHSSGIKNTCVYGGVPKRTQVMDLQRGVEIVIATPGRLIDHLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQALARDFLTNYYQVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLRE-HNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQ 342
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 357 bits (916), Expect = 2.770e-119
Identity = 175/218 (80.28%), Postives = 195/218 (89.45%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            QPYL+ GDGPIVLV+APTRELAVQIK+ECDKFGG+S IKNTC+YGGVPKR Q+ DL+RG+EI IATPGRLID LE+G TNLRRVTYLVLDEADRMLDMGFEPQIR IVSQIRPDRQTLMWSATWPKEV+GLARDFL NYYQVTVGSL+LSANKD+ QIIE +EDFGKYR L +HL++   +  + LIFVETKKGCDALTRSLR +G+ A  IHGDKNQ
Sbjct:  175 QPYLQPGDGPIVLVIAPTRELAVQIKQECDKFGGTSGIKNTCLYGGVPKRTQLYDLKRGIEIAIATPGRLIDHLESGATNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHL-KTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQ 391
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BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 345 bits (885), Expect = 1.300e-114
Identity = 173/220 (78.64%), Postives = 189/220 (85.91%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAG--RVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            QPYL+ GDGPIVLVVAPTRELA+QIKEECDKFGGSS IKNTCVYGGVPKR QV DL+ GVEIV+ATPGRLID LE G TNLRRVTYLVLDEADRMLDMGFEPQIR IVSQIRPDRQTLMWSATWPKEV+GLARDFL NYYQVTVGSL+L AN DI+Q+IEI ED+GKY      LQ+   + G  + L+FVETK+GCDALTRSLR +G+ A  IHGDK Q
Sbjct:  170 QPYLQPGDGPIVLVVAPTRELALQIKEECDKFGGSSGIKNTCVYGGVPKRAQVADLRAGVEIVVATPGRLIDHLEGGTTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELQANADIEQVIEICEDYGKYA----KLQETFRSRGGPKALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQ 385
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2X9_9STRA)

HSP 1 Score: 343 bits (879), Expect = 6.480e-114
Identity = 169/218 (77.52%), Postives = 190/218 (87.16%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            QPYL++GDGPIVLV+APTRELAVQIK ECDKFGGSS IKNTCVYGGVPKR QV DL+ GVEIVIATPGRLID LE+G TNLRRVTYLV+DEADRMLDMGFEPQIR IV QIRPDRQTLMWSATWPKEVEGLARDFL NYYQVTVGSL+L+ANK I+Q++E+V+D  KYR     L+++     RV+IFVETK+G D LTRSLR +G+PA +IHGDK Q
Sbjct:  158 QPYLQRGDGPIVLVLAPTRELAVQIKGECDKFGGSSQIKNTCVYGGVPKRTQVGDLRNGVEIVIATPGRLIDHLESGVTNLRRVTYLVMDEADRMLDMGFEPQIRKIVQQIRPDRQTLMWSATWPKEVEGLARDFLTNYYQVTVGSLELTANKAIRQLVEVVDDHDKYRRCSDFLRREFKGE-RVIIFVETKRGADQLTRSLRMDGYPASAIHGDKTQ 374
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 338 bits (867), Expect = 7.110e-114
Identity = 164/218 (75.23%), Postives = 195/218 (89.45%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            +PYLE GDGPIVLV+APTRELA+QIK+ECDKFG SS IKNTCVYGGVPKR QV DL+RG+EIV+ATPGRLID LE+G TNLRRVTYLVLDEADRMLDMGFEPQ+RSIVSQIRPDRQTLMWSATWPKEV+ LARDFL++ YQVTVGSLDL+ANKDI+Q + + ED  KY +L++ L+++ N  G+VL+FVETK+GCD L RSL+ +G+ A++IHGDK+Q
Sbjct:   35 RPYLESGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLKRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKEN-NTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQ 251
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1X6_9STRA)

HSP 1 Score: 336 bits (861), Expect = 2.440e-113
Identity = 162/218 (74.31%), Postives = 187/218 (85.78%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            Q YL+ G+GPIVL++APTRELAVQIKEECDKFGGSSD+KNT VYGGVPK  QV DL+ GVEIVIATPGRLID LE G TNLRRVTYLVLDEADRMLDMGFEPQ+R IV QIRPDRQ LMWSATWPKEV+ LA+D+L +YYQVTVGSLDLS NKD+ Q+IE+ +D  KYR L+K+L+ +     RVL+FVETKKGCD LTRSLR +G+ A ++HGDK+Q
Sbjct:    2 QQYLKPGEGPIVLILAPTRELAVQIKEECDKFGGSSDVKNTVVYGGVPKSRQVRDLRSGVEIVIATPGRLIDHLEQGNTNLRRVTYLVLDEADRMLDMGFEPQLRKIVGQIRPDRQVLMWSATWPKEVKNLAQDYLEDYYQVTVGSLDLSGNKDVTQMIEVCQDAEKYRNLLKYLKDNLTERDRVLVFVETKKGCDMLTRSLRMDGYAARAMHGDKSQ 219
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: Dead-box (atp-dependent rna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U315_9STRA)

HSP 1 Score: 340 bits (871), Expect = 1.080e-112
Identity = 165/218 (75.69%), Postives = 195/218 (89.45%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            QPYLE GDGPIVLV+APTRELA+QIK+ECDKFG SS IKNTCVYGGVPKR QV DL+RG+EIV+ATPGRLID LE+G TNLRRVTYLVLDEADRMLDMGFEPQ+RSIVSQIRPDRQTLMWSATWPKEV+ LARDFL++ YQVTVGSLDL+ANKDI+Q + + ED  KY +L++ L+++ N  G+VL+FVETK+GCD L RSL+ +G+ A++IHGDK+Q
Sbjct:  165 QPYLESGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLKRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKEN-NTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQ 381
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9IVW3_9STRA)

HSP 1 Score: 333 bits (854), Expect = 2.920e-112
Identity = 160/216 (74.07%), Postives = 185/216 (85.65%), Query Frame = 1 
Query:    7 YLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRMQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLSANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQ 654
            YL+ GDGPIVL++APTRELAVQIKEECDKFG SSDIKNT VYGGVPK  QV DL++GVEIVIATPGRLID LE   TNL+RVTYLV+DEADRMLDMGFEPQ+R I SQIRPDRQ LMWSATWPKEVE LARD+L+ +YQVTVGSLDL+ NKD+ Q+IE+  D  KYR L+KHL+++     RVL+FVETKKGCD LTRSLR +G+ A ++HGDK+Q
Sbjct:    3 YLKPGDGPIVLILAPTRELAVQIKEECDKFGASSDIKNTVVYGGVPKSRQVRDLRQGVEIVIATPGRLIDHLEQSNTNLKRVTYLVMDEADRMLDMGFEPQLRKICSQIRPDRQVLMWSATWPKEVENLARDYLKEFYQVTVGSLDLAGNKDVTQVIEVCSDQDKYRNLLKHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQ 218
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7584.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.400e-14794.95protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
DEAD1.440e-12785.78box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
DEAD4.440e-12282.11box helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
Hypothetical2.770e-11980.28protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical1.300e-11478.64protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical6.480e-11477.52protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Uncharacterized7.110e-11475.23protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Hypothetical2.440e-11374.31protein n=1 Tax=Proboscia inermis TaxID=420281 Rep... [more]
Dead-box1.080e-11275.69atp-dependent rna helicase n=1 Tax=Nannochloropsis... [more]
Hypothetical2.920e-11274.07protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7584contigH-canaliculatus_M_contigs7584:343..4226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LRW1
Preferred nameDBP2
PFAMsDEAD,Helicase_C
Model size654
Max annot lvl2759|Eukaryota
KEGG koko:K12823
KEGG Pathwayko03040,ko05202,ko05205,map03040,map05202,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000184,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008026,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042254,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043633,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0051179,GO:0060255,GO:0060293,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0071042,GO:0071047,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990120,GO:1990904
Exons5
Evalue6.71e-146
EggNOG OGsCOG0513@1|root,KOG0331@2759|Eukaryota
EC3.6.4.13
Descriptionhelicase activity
Cds size654
COG categoryL
BRITEko00000,ko00001,ko01000,ko03009,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854095.6905556-CDS-H-canaliculatus_M_contigs7584:342..4681696854095.6905556-CDS-H-canaliculatus_M_contigs7584:342..468Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7584 343..468 -
1696854095.704532-CDS-H-canaliculatus_M_contigs7584:788..8931696854095.704532-CDS-H-canaliculatus_M_contigs7584:788..893Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7584 789..893 -
1696854095.7165046-CDS-H-canaliculatus_M_contigs7584:2429..25911696854095.7165046-CDS-H-canaliculatus_M_contigs7584:2429..2591Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7584 2430..2591 -
1696854095.7287772-CDS-H-canaliculatus_M_contigs7584:3278..33831696854095.7287772-CDS-H-canaliculatus_M_contigs7584:3278..3383Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7584 3279..3383 -
1696854095.744597-CDS-H-canaliculatus_M_contigs7584:4070..42261696854095.744597-CDS-H-canaliculatus_M_contigs7584:4070..4226Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7584 4071..4226 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7584.1.1prot_H-canaliculatus_M_contigs7584.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7584 343..4226 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7584.1.1

>prot_H-canaliculatus_M_contigs7584.1.1 ID=prot_H-canaliculatus_M_contigs7584.1.1|Name=mRNA_H-canaliculatus_M_contigs7584.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=218bp
QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKR
MQVNDLQRGVEIVIATPGRLIDLLEAGKTNLRRVTYLVLDEADRMLDMGF
EPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLDLS
ANKDIQQIIEIVEDFGKYRILIKHLQQDHNNAGRVLIFVETKKGCDALTR
SLRHEGWPALSIHGDKNQ
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mRNA from alignment at H-canaliculatus_M_contigs7584:343..4226-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7584.1.1 ID=mRNA_H-canaliculatus_M_contigs7584.1.1|Name=mRNA_H-canaliculatus_M_contigs7584.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3884bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7584:343..4226- (Hapterophycus canaliculatus Oshoro7m male)
CAGCCTTACCTCGAGCAAGGCGACGGCCCGATCGTGTTGGTGGTGGCACC
GACCCGCGAGTTGGCCGTGCAGATCAAGGAGGAGTGTGACAAGTTCGGCG
GCTCGAGCGACATCAAGAACACGTGCGTATACGGAGGCGTGCCGAAGCGG
ATGCAGGTAGGAGCAAAGCGAGTCACCAGGCGTGAATTGGTAACCGTCCC
GAATGATTTTGTGTGTTCTTCTGTATTGCTACCTAATCTATATTGTATGG
TAAGCGTTAGTTCGTACATTGTGGGTGACAGGGCTCTGCTGCTGCCTGCA
CTCTGAGATCATGCAGAATATACTAGTACACGGTTTCGTTGATCGAGATG
TGTCTTCATCAGCACACTGACTGTATTGCTGTTTCATTTATCTCCAAAAA
AGAAATCGACGCTAATGGCACCTGAATCATTTCACTTGTGTCCCAACCCG
TTGTCACCTCAATTATTATGAACGAAAACGTACCGGTGTAGATGGAGTTA
CACCACGTGCTCAAGAACGTTTCCCTCTCCTCCCGCCAAGATGATCCGCC
TTACTATTCGAGCCAAAATGGGATCGCGCTACCTGTAGTACCAACGGATC
TTCGGCGCTTGATGTGTCCATCAGGAGTGTCGTTGACTCCGCGATGCTAC
GGTGGCATGCTATGGTGCTGCGTTTGAGTTACAAAGAGCCAACAACAATG
GATACAAATTTCGAGGCAGAGGCTCGACGGGATTGTGATCGAAGTACTTG
CGGCGAGCGATCCATGCGTAAGCCGGGACACAAAAGCTGCTTGTTTTTCG
AGTATTCGACGAACGTCAGCACCAATACCAACACCAAAATCAGGTGAATG
ACCTACAGCGAGGGGTGGAAATCGTGATCGCCACCCCAGGACGGCTGATC
GACCTGCTCGAGGCTGGCAAGACAAACCTACGACGAGTGACCTATCTTGT
GAGTAATAGTTAAACTATGCATACTGTACATGCATGACTTCCCCGTGAAG
AGCGTGAATCAGTATTCAACCGGCTGGTCGACACGAACGTTTCATTCGTT
ACATCTCCCTGAGATTCCTCGCTCGGAGACCTCTAGGTTGTTCGTGGCGT
GTTCCAGCGGTGGGGCTGTTGTGGCTTTTCCTGGACATCAGCGGAGGAGA
ACCTGGTTAACCTGTGCGGTCCATCTTCGTCTTGCGTCGGCCGTATCGCC
CACTTGTGCTTGCGCCTCCGGCTTGTTTCCTAGCGTTTGCTTCTCTGGGT
TGTGCATCGTGCTAAGTGTAGAAAAACGAAGATGGTGCGGGTAGAATCGC
AATCTCCCTCCTCGCCGAGCAACAGAATACCTTCGTCTCGTTGAGTCTCG
ACTTGACCGCTGGTGCAGTCGGATGATCTTTCAATGGGAGGGCTTGTGCG
AGTGAAATACATCGTCAATGGGCATAAAACGAACCGCCCATCTTCCAGAA
TGCTTCATGACGAAGGAGCCGTCTTCCTGGACTTATATGCTTCTTCGACG
AACTCAACGCACACACGAATACTCAAACAAACCAATATCAATGGTATCAG
ACGAATGGCTGACTACACGGTACAAAATGTCCAACCAAGTGAGTGCTGCA
ATAAACGATGACCTCACTACGTCGTGACTGTCAAGGTTCTGGACGAGGCC
GACCGCATGCTCGACATGGGCTTTGAGCCTCAGATTCGCTCCATCGTCAG
CCAGATACGTCCAGACAGGCAGACACTCATGTGGAGCGCTACCTGGCCGA
AGGAGGTCGAGGGGCTGGCTAGGGATTTTCTCCGTAACTACTATCAGGTA
TGGCGTTCATTATGGGGTGGAGTCAGGACGTCTCTTCAGACTAGCCGGAG
GGCGTGCGGGGGTGGGGAGAAAGGGTAGGGCAGATCTTTCCTACAAGTGC
AACAGTTTTTGAATCGGAAGAGATTGAGCGGCACACTAGGGACTGCATCC
GCAACGAGAGTTCTGCCTGGTAAGTTACTAGTTGGACGAGAGAGGGAGAT
GGGGCGGGTAGTCTGTTGTTTTCGATAGTGAATTCGTTCACGGGGTATGG
GGGTCGGTTCTGTCAAGACTTTCTTTTTTGGCGGAGGACCTAGCCAAAGA
TTGTGTCGACCAATGAACGATGTACCGTGTTTGCTTTGATGGGAGGATAA
AGGAATCTATAGTGGACGAGATGGATTGGCTCAACCATTCGAGGTGATGT
TTGCGATTGAGTAGACCGTCTTCGGTCTGACCGCTCTGCTTCACTACCTG
TATACTCGGAGCTGAGAATTAAACCTCCACTCTCCCTACGAGTGACGTTG
AAATGTCTGACTGGAGAGGAAACGAATTTTTTACTTTCGAGCGGTTCTGC
TCGGATGGGTCAAGGATTTCTCCGTTCTAGCCGTCGACGTCGTTCAAGTA
GACAAACGTTGAGGTGGCGGAAATGGGGGTCGCGATTGACGAGGGAGCGT
TCCGCAGTTTCCCCGATTTTCAGCAGCATTCACTTCGTTTCGAGCTAGCG
AAACCTCCAACTTGGCGAGTTCAGGGAGCGGCCACCTTGCTTTTTATTCT
GTGTGGGTTGGAGGATATCTTGGCCGACCTCAAGTGTTGGCAGACCACAC
TACGTATCAGAGATGTTTGCAAATATTCCTGCAGTCTTAGTGCGGAATAA
AGTTGTGCTGCCACACCCAAAGGGAATATGTGTCCGGGGTGGCTCGATCT
AGTGTGCTCAGAAGCTAAGGGGAACTAAAACAACCTTCATGCTCCCCTCT
CTGCTGTTTGAAGCTGGGGTTCTTCTGCCGAGTGCTCGTTTTCACTACCC
ACACAACGGGAGTGCTAGAGTAGTCCCCCCGTGCCCACCGAGCGAGAACG
CATGTCGACCGGTCCCTTCATACGAAGAAAGTGGGCACGCGTGTACAGCG
CGAGAGCTCAAATGGCGTCTGTGCCCCTTTCCTTTGCGCGTGACAGTTGC
AATGCTGGGTGATGACTACTCTGGCCTCCAAACCATGCGCGGTTTGGCAG
TAGTGCATCTTCATGTCTCGACTCCGACTGACGTCGTTCAATGAATTTGG
TTTGGATTGTAAACATCACCCAGCACCATGCGAGACCGACCATGCAGATA
TCTTATGTTGTTAAGAATATTTCGTTTGGTATCTCGCAGAGGAACTCACA
AAAATACGTTTAGATGTATGAATGAGGAACATCTCAATGACCCAGAACGT
GCAAGCACAGTACTTGCCAAATATTCCGACAAAGAAAATCGCTCTTCTCA
GTGTCTTAATAAGCACATTATTTGTCCTTTTCTCCGTTTTCTTGCCTTCT
CCCTACTGCTTGCGTGTTGCAATTTTCGTTCAGGTGACGGTGGGATCTCT
GGATCTGTCAGCCAACAAGGACATCCAACAAATCATCGAGATAGTTGAGG
ACTTCGGCAAGTACAGGATTCTTATCAAGCACCTCCAGGTACACCGCAAA
ATATGGTATATGCACCGTTTCGCTATTTCACTGGGTTAATTGGGTTTCCT
CTGGCTGGGTAGCACTTGTTCTCACAGTTTCTTCTGCATGGTACCAAGAT
GCACCCTCGTAATATGACCCGTTATGTGTGAGACTCGCGAGACATCTGTG
GCGCGGGTGCTGATCGCCCAAAGTCGCTTGGACTGGCCCAAAGTTGCTGC
GGCAACAACCACGGCGATGCTTTAACGCAACTGTAGCTGCAAGACGGTGA
CCCCTCGCCCATGAAACTATCATTGCGTTTGAAAACATTCCGCTATTCGA
TCGGCAAGCAGGATCACAACAATGCTGGCAGGGTACTGATCTTCGTCGAG
ACCAAAAAGGGATGCGATGCTCTTACGCGCTCCCTGCGCCACGAGGGTTG
GCCCGCCCTGTCCATCCATGGTGACAAGAATCAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7584:343..4226-

>mRNA_H-canaliculatus_M_contigs7584.1.1 ID=mRNA_H-canaliculatus_M_contigs7584.1.1|Name=mRNA_H-canaliculatus_M_contigs7584.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=654bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7584:343..4226- (Hapterophycus canaliculatus Oshoro7m male)
CAGCCTTACCTCGAGCAAGGCGACGGCCCGATCGTGTTGGTGGTGGCACC
GACCCGCGAGTTGGCCGTGCAGATCAAGGAGGAGTGTGACAAGTTCGGCG
GCTCGAGCGACATCAAGAACACGTGCGTATACGGAGGCGTGCCGAAGCGG
ATGCAGGTGAATGACCTACAGCGAGGGGTGGAAATCGTGATCGCCACCCC
AGGACGGCTGATCGACCTGCTCGAGGCTGGCAAGACAAACCTACGACGAG
TGACCTATCTTGTTCTGGACGAGGCCGACCGCATGCTCGACATGGGCTTT
GAGCCTCAGATTCGCTCCATCGTCAGCCAGATACGTCCAGACAGGCAGAC
ACTCATGTGGAGCGCTACCTGGCCGAAGGAGGTCGAGGGGCTGGCTAGGG
ATTTTCTCCGTAACTACTATCAGGTGACGGTGGGATCTCTGGATCTGTCA
GCCAACAAGGACATCCAACAAATCATCGAGATAGTTGAGGACTTCGGCAA
GTACAGGATTCTTATCAAGCACCTCCAGCAGGATCACAACAATGCTGGCA
GGGTACTGATCTTCGTCGAGACCAAAAAGGGATGCGATGCTCTTACGCGC
TCCCTGCGCCACGAGGGTTGGCCCGCCCTGTCCATCCATGGTGACAAGAA
TCAG
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