mRNA_H-canaliculatus_M_contigs75780.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: Tetratricopeptide (repeat protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=UPI00198984BC) HSP 1 Score: 69.3 bits (168), Expect = 3.180e-11 Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 1 AWHAIKEYAKASYDYEAALRCQARFGTRWRHVAWFLATCPDATYRDGQRAKDLMKQERERREVVATVCLAIDAAAHAECGDFRSAIQLQNDYLRNVEKDREIGSASKLDIVIPDNALSRYQQSKP 375
A+H +KEYAKA DY AL+ + + +AW LATCPDA +RDG++A +L + E + + AAA+AE G F A++ + + +EK + S K+ + L Y++++P
Sbjct: 643 AYHELKEYAKAEEDYAIALKSRPDYPNLLVSIAWQLATCPDARFRDGKKAMELATKANEEFKWKLPEHVDALAAAYAENGQFAEAVKWEKKAMELLEKG-QTDSRKKM-----QSRLELYREARP 761
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9HZB1_9ZZZZ) HSP 1 Score: 62.0 bits (149), Expect = 3.710e-9 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 1
Query: 16 KEYAKASYDYEAALRCQARFGTRWRHVAWFLATCPDATYRDGQRAKDLMKQERERREVVATVCLAIDAAAHAECGDFRSAIQLQNDYLRNVEKDREIGSASKLDIVIPDNALSRYQQSKP 375
K++A+A +EA L+ H+AW+LATCPDA R+G+RA L + ER + L AAAHAE G F+SA+ + + + + A ++ I + Y +KP
Sbjct: 91 KKFAQAIRIWEAGLKSNPGSAVLSYHLAWWLATCPDAAVRNGKRAAQLAQALCERTGRKDALALDALAAAHAEIGQFKSAVAVATEAMNLARAQKRTALAGEISARI-----NLYMAAKP 205
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Planctomyces sp. SCGC AG-212-M04 TaxID=1799657 RepID=A0A177R1Z9_9PLAN) HSP 1 Score: 60.5 bits (145), Expect = 3.150e-8 Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1
Query: 13 IKEYAKASYDYEAALRCQARFGTRWRHVAWFLATCPDATYRDGQRAKDLMKQERERREVVATVCLAIDAAAHAECGDFRSAIQLQNDYLRNVEKDREIGSASKLDIVIPDNA--LSRYQQSKPL 378
+ ++ K+ DY L + W AW ATCPDA +RDGQRA L ++ E ++I AAA+AE G + AI++Q+ R +E+ +KLD P A L +QQSKPL
Sbjct: 202 LGQFDKSQADYREQLEIKP--DESWSDWAWQSATCPDAQFRDGQRAIRLAQKSCENSNWSIPANISILAAAYAEAGRYDDAIKMQS---RAIEE-------NKLDYWKPIFAKRLESFQQSKPL 313
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: Tetratricopeptide (repeat protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7F0P7_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 3.830e-8 Identity = 40/121 (33.06%), Postives = 60/121 (49.59%), Query Frame = 1
Query: 13 IKEYAKASYDYEAALRCQARFGTRWRHVAWFLATCPDATYRDGQRAKDLMKQERERREVVATVCLAIDAAAHAECGDFRSAIQLQNDYLRNVEKDREIGSASKLDIVIPDNALSRYQQSKP 375
I ++A+A D+E AL+ ++AW LAT PD RDG+RA +L + E + L+ AAA+AE GDF+SA++ + +KD E G + L Y+ KP
Sbjct: 406 IGKHAEAIADFEKALKLAEPDSGTLNNLAWVLATSPDDELRDGRRAVELALKACELTQYGQAHILSTLAAAYAESGDFKSAVEWSKKAIELDKKDEEKGDDGDNVGDALEKELQSYRDGKP 526
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Olavius algarvensis associated proteobacterium Delta 3 TaxID=426688 RepID=A0A7I8MW85_9DELT) HSP 1 Score: 59.7 bits (143), Expect = 4.930e-8 Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 94 VAWFLATCPDATYRDGQRAKDLMKQERERREVVATVC-LAIDAAAHAECGDFRSAIQLQNDYLRNVEKDREIGSASKLDIVIPDNALSRYQQSKP 375
+AW LATCPDA YRDG+ A DL K+ + + C L AAA+AE G ++ A+++Q + +E + E G +L + L +Y+ +KP
Sbjct: 184 LAWILATCPDAKYRDGREAVDLAKKA---LSITSDSCGLDSLAAAYAEIGKYQEAVKIQEQCIYQLESEGEKGRLDEL-----NKRLKQYKNNKP 270
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: Uncharacterized (protein n=3 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6FK91_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 1.140e-7 Identity = 36/95 (37.89%), Postives = 48/95 (50.53%), Query Frame = 1
Query: 22 YAKASYDYEAALRCQARFGTRWRHVAWFLATCPDATYRDGQRAKDLMKQERERREVVATVCLAIDAAAHAECGDFRSAIQLQNDYLRNVEKDREI 306
Y A D E A+ + AW LATCPD++ RDGQRA + E + + + L AAA AE GDFRSA++ + L E DR +
Sbjct: 135 YHAARVDLEKAIALDKNNVLAHNNYAWLLATCPDSSVRDGQRAVQHARGASESLKHGSPIVLDTLAAAEAEIGDFRSAVKDEKRALSLAEGDRSL 229
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: TPR (repeat-containing protein YrrB n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517QXI9_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 3.430e-7 Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = 1
Query: 94 VAWFLATCPDATYRDGQRAKDLMKQERERREVVATVCLAIDAAAHAECGDFRSAIQLQNDYLRNVEKDREIGSASKLDIVIPDNALSRYQQSKP 375
+AW LATCPDA YRDG+RA +L + E + AAA+AE GD+ A+++Q ++ V D++ S+L++ YQ KP
Sbjct: 565 LAWLLATCPDAAYRDGERAVELGTKACELSGWETGNWIDTLAAAYAEAGDWEKAVEMQRKAIKIVPADQKEDFRSRLEL---------YQSEKP 649
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: Tetratricopeptide (repeat protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4RNT7_9DELT) HSP 1 Score: 56.2 bits (134), Expect = 1.190e-6 Identity = 32/94 (34.04%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 91 HVAWFLATCPDATYRDGQRAKDLMKQERERREVVATVCLAIDAAAHAECGDFRSAIQLQNDYLRNVEKDREIGSASKLDIVIPDNALSRYQQSK 372
++AW L+TCPD YRDG++A + K+ + L AAA+AE G+F++AI++Q + +R +EK ++ +L +N LS Y++ +
Sbjct: 579 NLAWLLSTCPDPQYRDGKQAIKIAKKGNDLNP--GAYMLDTLAAAYAENGNFKTAIEMQEEAIRILEKQGKLNLIREL-----ENHLSAYKREE 665
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D2TLL8_9PLAN) HSP 1 Score: 55.8 bits (133), Expect = 1.590e-6 Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 13 IKEYAKASYDYEAALRCQARFGTRWRHVAWFLATCPDATYRDGQRAKDLMKQERERREVVATVCLAIDAAAHAECGDFRSAIQ 261
+ ++A+A D+E AL + + ++AW LAT PD RDG RA +L + + E + L+ AAA+AE GDF+SAI+
Sbjct: 424 VGKHAEAIADFEKALVLRQEDSSLLNNLAWVLATSPDDPVRDGLRAIELATKACQLTEYKKSHILSTLAAAYAEAGDFKSAIE 506
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5N8T2_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 1.600e-6 Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 10 AIKEYAKASYDYEAAL-RCQARFGTRWRHVAWFLATCPDATYRDGQRAKDLMKQERERREVVATVCLAIDAAAHAECGDFRSAIQLQNDYLR 282
A EY++A D+E L R + VAWFLATCPD + RDG+++ L + E + L AAA+AE GDF AI+ Q++ L+
Sbjct: 481 ARNEYSQARADFERVLERSRDPQARVLNAVAWFLATCPDESARDGRKSVPLATKACELTQWKNASLLDTLAAAYAEAGDFDQAIKWQSETLK 572 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75780.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75780.1.1 >prot_H-canaliculatus_M_contigs75780.1.1 ID=prot_H-canaliculatus_M_contigs75780.1.1|Name=mRNA_H-canaliculatus_M_contigs75780.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=126bp AWHAIKEYAKASYDYEAALRCQARFGTRWRHVAWFLATCPDATYRDGQRAback to top mRNA from alignment at H-canaliculatus_M_contigs75780:153..530- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75780.1.1 ID=mRNA_H-canaliculatus_M_contigs75780.1.1|Name=mRNA_H-canaliculatus_M_contigs75780.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=378bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75780:153..530- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75780:153..530- >mRNA_H-canaliculatus_M_contigs75780.1.1 ID=mRNA_H-canaliculatus_M_contigs75780.1.1|Name=mRNA_H-canaliculatus_M_contigs75780.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=378bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75780:153..530- (Hapterophycus canaliculatus Oshoro7m male)back to top |