mRNA_H-canaliculatus_M_contigs7578.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXL7_9PHAE) HSP 1 Score: 201 bits (511), Expect = 6.530e-63 Identity = 92/116 (79.31%), Postives = 108/116 (93.10%), Query Frame = 1
Query: 1 APEFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNRFAPGQQPIQGAVGKQPMTQEDMMQVFRKASRLGTEETKFYLESSGWDLAKALAEWRAEVRWEAEQ 348
APEFLEHV+LPDDTL GICLKYKVKDRELR+LNGFVGDHFRMCD L+VPNRF+PGQQPIQGA GK+P+++ D MQ+FRK S+LG EE++FYLES+GW+L+KALA+WRAE RWEAEQ
Sbjct: 83 APEFLEHVVLPDDTLVGICLKYKVKDRELRRLNGFVGDHFRMCDVLIVPNRFSPGQQPIQGASGKEPISRNDTMQLFRKDSQLGAEESRFYLESNGWELSKALAQWRAENRWEAEQ 198
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLF6_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.910e-27 Identity = 52/113 (46.02%), Postives = 73/113 (64.60%), Query Frame = 1
Query: 4 PEFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNRFAPGQQPIQGAVGKQPMTQEDMMQVFRKASRLGTEETKFYLESSGWDLAKALAEWRAEVRWEA 342
P FLEHVI+P+DTL GICL+Y+V +EL N F G+HFR+C L +PN+F ++ QP ++E +Q FR S LG +E FYLE++ W LA AL ++R + WE+
Sbjct: 72 PAFLEHVIMPEDTLVGICLRYRVSKKELHHYNDFFGEHFRLCKVLRIPNKFTD----VEAVAQLQPRSREVDLQRFRYESGLGMKEAAFYLETNDWSLALALLQFRGDTEWES 180
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB6_HETAK) HSP 1 Score: 100 bits (249), Expect = 3.800e-24 Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 1
Query: 4 PEFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNRFAPGQQPIQ--GAVGKQPMTQEDMMQVFRKASRLGTEETKFYLESSGWDLAKALAEWRAEVRWEAEQ 348
P FLEH+ILP DTL GICL+++ K ELR+LN F GD+FR+C L++P + + +Q V K +Q F SRLG +E ++YL ++GWDLA AL R + WE Q
Sbjct: 87 PTFLEHIILPSDTLTGICLRHRCKPAELRRLNNFFGDNFRLCQKLIIPVKEGVNLEQLQQHSEVAK--------VQAFCNESRLGPQEARYYLGAAGWDLASALRAARDDRLWETAQ 195
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9K6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.150e-19 Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 1
Query: 1 APEFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVP--NRFAPGQQPIQGAVGKQPMTQEDMMQVFRKASRLGTEETKFYLESSGWDLAKALAEWRAEVRWEAEQ 348
+P+F+EHVI+P+DTL GICL+YK LR+ N F G+ FR+C +L +P ++ +P Q MT+E MQ+ + L E K YL+ WD+A A+ + ++ WEAEQ
Sbjct: 77 SPDFIEHVIMPEDTLVGICLRYKASKAVLRRHNDFFGEQFRLCRTLRIPVNDKNIVDLRP-------QAMTKEVKMQITMNRTGLADVEAKIYLDDHNWDVATAVRHAKEDLDWEAEQ 187
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8A5I8_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.440e-14 Identity = 42/112 (37.50%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 7 EFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNRFAPGQQPIQGAVGKQPMTQEDMMQVFRKASR-LGTEETKFYLESSGWDLAKALAEWRAEVRWE 339
+F+EHV+LP DTLAGICL+YK+K +LR+ N FVG++ R + L +P + KQ +++ +Q + A++ LG E +FYL+ + D+ KA+A+ R++ +E
Sbjct: 69 DFIEHVVLPSDTLAGICLRYKIKKYDLRRHNFFVGENIRSVEILKIPLNKGK-------TIKKQKESRQVKLQKIKNATKGLGAIEAEFYLDEADGDVVKAIAKARSDDAFE 173
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: LysM (domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQP3_9ARCH) HSP 1 Score: 71.2 bits (173), Expect = 1.120e-12 Identity = 36/113 (31.86%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 4 PEFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNRFAPGQQPIQGAVGKQPM--TQEDMMQVFRKASRLGTEETKFYLESSGWDLAKALAEWRAEVRW 336
P +EH+++P+DTL G+CL+Y V ++R++N F G + + SL +P IQ +P T E +Q F+ A+ +E YLE +D+ KA++ W+ + W
Sbjct: 64 PSVIEHIVMPEDTLPGLCLRYSVTATDIRRMNIFSGSNIQFKKSLRIP---------IQSGAYIEPQLDTVEVKVQKFKNATGESNKEAHLYLEEHNYDVDKAISAWKGDENW 167
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: LysM (domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHM5_AURAN) HSP 1 Score: 64.7 bits (156), Expect = 1.000e-9 Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 1 APEFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNRFAPGQQPIQGAVGKQPMTQEDMMQVFRKASRLGTEETKFYLESSGWDLAKALAEWRAE 327
A E EHV++P DTLAG+CLKY V R LR LN GD+ + L +P A P+Q T++ + + R A+RL E+ LE+ WD +A AE
Sbjct: 27 AGEAREHVVVPGDTLAGLCLKYAVSARALRTLNKLDGDNVQGVAVLAIPPSPAGRPAPVQA------QTRDVVARRLRAATRLPLEDCVARLEARDWDFGACVAAHEAE 129
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: Hypothetical (protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VMI9_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.020e-9 Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 1
Query: 4 PEFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNRFAPGQQPIQGAVGKQPMTQEDMMQVFRKASRLGTEETKF--YLESSGWDLAKALAEWRAEVRWEAEQ 348
P ++H+ILP DTLAGICLKYK+ ++R++N F G + + + L+ P Q + G + Q + + +A L + + YLE + WDL A+ + ++ WE Q
Sbjct: 147 PTHIQHIILPTDTLAGICLKYKISAVKVRQINRFSGSNLHLAPNPLIIPIVDP-QLLVDGVIKVQNTESREFKRGAFRARFLSLRDGEITSYLEMNNWDLEAAMQNAKDDIAWEKSQ 262
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C639_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.630e-9 Identity = 39/126 (30.95%), Postives = 64/126 (50.79%), Query Frame = 1
Query: 7 EFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNRFAPGQQPIQGAVGKQPMTQEDMMQVFRKASRLG------------TEETKFYLESSGWDLAKALAEWRAEVRWEAEQ 348
++LEHV+LP DTL G+CL+YKVK LR+ N F G+ + L+ P G + + Q+ ++F+ S L +E + YL+ + W++ +A+ E AE+ WE +Q
Sbjct: 119 KYLEHVVLPSDTLQGLCLRYKVKPVVLRQANMFSGNTLFLAPKKLLI--------PCSGNIDISKVRQDTTSELFKAHSFLSQVNGLRRFTGFSNKEARVYLDLNDWNVDEAVKEALAEIDWEGDQ 236
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWZ4_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.670e-9 Identity = 32/97 (32.99%), Postives = 53/97 (54.64%), Query Frame = 1
Query: 4 PEFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNRFAPGQQPIQGAVGKQPMTQEDMMQVFRKASRLGTEETKFYLESSGWD 294
P +EH ++PDDTL GICL+Y+ E+R++N F G++ +L +P GQ + Q T + ++Q FR + E++ YLE + W+
Sbjct: 69 PIIIEHTVMPDDTLQGICLRYRASVMEIRRMNLFSGNNIHCKKTLRIP--LTKGQ-----IITGQENTNDVILQKFRNETSESLAESRVYLEDNNWE 158 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7578.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7578.1.1 >prot_H-canaliculatus_M_contigs7578.1.1 ID=prot_H-canaliculatus_M_contigs7578.1.1|Name=mRNA_H-canaliculatus_M_contigs7578.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=116bp APEFLEHVILPDDTLAGICLKYKVKDRELRKLNGFVGDHFRMCDSLLVPNback to top mRNA from alignment at H-canaliculatus_M_contigs7578:10..1730+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7578.1.1 ID=mRNA_H-canaliculatus_M_contigs7578.1.1|Name=mRNA_H-canaliculatus_M_contigs7578.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1721bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7578:10..1730+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7578:10..1730+ >mRNA_H-canaliculatus_M_contigs7578.1.1 ID=mRNA_H-canaliculatus_M_contigs7578.1.1|Name=mRNA_H-canaliculatus_M_contigs7578.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=348bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7578:10..1730+ (Hapterophycus canaliculatus Oshoro7m male)back to top |