mRNA_H-canaliculatus_M_contigs75777.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: Transporter (n=5 Tax=Sulfitobacter mediterraneus TaxID=83219 RepID=A0A061SSC3_9RHOB) HSP 1 Score: 202 bits (514), Expect = 6.320e-60 Identity = 118/180 (65.56%), Postives = 142/180 (78.89%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFGRQLGATSSSTV--DVGTSNIALTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RALLRAADE VAIA SAL P+++W+A A + FGR A + V D T++++L A +L+YD+G+ +E++KETVLATR LV +EQQVLLRAI A+MGV +ASEFVALR NN+RLLTQELRAA DRFEVGEVTRTDVALA+A+LAQARSGLA AQ D LRA EY N VG KPG+L
Sbjct: 52 RALLRAADEDVAIAGSALKPVVRWTAAATQSFGRVRTAATGVAVANDDLTASLSLVAEMLIYDAGARKFRVEATKETVLATRDALVNVEQQVLLRAISAYMGVLEASEFVALRTNNVRLLTQELRAARDRFEVGEVTRTDVALAEAQLAQARSGLAGAQGDRLRAIEEYRNAVGRKPGQL 231
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: TolC (family outer membrane protein n=1 Tax=Sulfitobacter sabulilitoris TaxID=2562655 RepID=A0A5S3PLD5_9RHOB) HSP 1 Score: 202 bits (513), Expect = 8.900e-60 Identity = 119/181 (65.75%), Postives = 144/181 (79.56%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFGRQLGA-TSSSTVDVGTSNIA--LTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RALLRAADE VA A SAL PI+ WS R FG LG+ T + +G ++++ L A LLL+DSG+++ I +KE+VLATRQTL++IEQQVLLRA+ AFM VR ASEFVALRQNNLRLLT+ELRAA DRFEVGEVTRTDVALA+AR A+ARSGLA A+ +LL+A+ EY NVVG +PGRL
Sbjct: 51 RALLRAADEDVATAVSALRPILSWSGDVTRTFGNSLGSNTFGAKRSIGNTSVSAGLLAQLLLWDSGAASLGIGVAKESVLATRQTLISIEQQVLLRAVSAFMSVRSASEFVALRQNNLRLLTEELRAARDRFEVGEVTRTDVALAEARQAEARSGLATARGNLLQAQEEYKNVVGRRPGRL 231
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: Transporter (n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A3D2FCJ5_9RHOB) HSP 1 Score: 200 bits (509), Expect = 2.670e-59 Identity = 115/178 (64.61%), Postives = 139/178 (78.09%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFGRQLGATSSSTVDVGTSNIALTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RALLRAADE VA A++ALLPI+ WSA QR F Q A +S+ I + A LLLYD G S A+IE+++E+V ATR L++IEQQ++LRA+ A+ VR S+FVALRQNNLRLLTQELRAA DRF+VGEVTRTDVALA+ARLAQARSGLA+AQ DLL A+AEY NV+GH+P L
Sbjct: 48 RALLRAADEDVASASAALLPIVNWSAQTQRTFSSQERARNSNAT------IGVNAELLLYDFGGSDASIEAARESVFATRSQLLSIEQQIMLRAVTAYFNVRSTSKFVALRQNNLRLLTQELRAAKDRFDVGEVTRTDVALAEARLAQARSGLANAQGDLLTARAEYANVIGHQPRNL 219
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: Transporter (n=1 Tax=Sulfitobacter sp. SK011 TaxID=1389004 RepID=A0A345Q8K9_9RHOB) HSP 1 Score: 200 bits (509), Expect = 3.740e-59 Identity = 121/180 (67.22%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFGRQL--GATSSSTVDVGTSNIALTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RALLRAADE VAIA S L P++ WSA ++FGR GA SS+VD ++ I L LLL+D G+S IE++KETVLATR TL+ IEQ VLLRA+ A+MGV +ASEFVALR NNLRLLTQELRAA DRF+VGEVTRTDVALA+A+LAQARSGLA A+ D LRA EY N VG KPGRL
Sbjct: 55 RALLRAADEDVAIAGSTLKPVLSWSADLTQNFGRTRAGGAGFSSSVDNLSATIGLIGQLLLFDFGASQYRIEAAKETVLATRGTLLDIEQIVLLRAVRAYMGVIEASEFVALRNNNLRLLTQELRAARDRFDVGEVTRTDVALAEAQLAQARSGLAGAEGDYLRAIEEYRNAVGRKPGRL 234
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: TolC (family outer membrane protein n=1 Tax=Sulfitobacter maritimus TaxID=2741719 RepID=UPI0015820684) HSP 1 Score: 199 bits (505), Expect = 1.370e-58 Identity = 117/180 (65.00%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFG--RQLGATSSSTVDVGTSNIALTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RALLRAADE VA A +AL P+++W+ G + FG R G + TVD +++I+L +LLYD GSS IE++KE VLATRQTL+ +EQQVLLRA+ A+MGV +ASE VALR NNLRLLTQELRAA DRFEVGEVTRTDVALA+A+LA ARSGLA A+ LLRA EY N VGHKPG+L
Sbjct: 52 RALLRAADEDVAAAKAALRPVLRWAGGLTQSFGTSRSSGLQPAQTVDDLSASISLIGEMLLYDFGSSEYRIEAAKEAVLATRQTLLNLEQQVLLRAVTAYMGVIEASETVALRNNNLRLLTQELRAARDRFEVGEVTRTDVALAEAQLANARSGLAGAEGILLRAVEEYRNAVGHKPGKL 231
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: TolC (family outer membrane protein n=1 Tax=Sulfitobacter noctilucae TaxID=1342302 RepID=UPI000468CD76) HSP 1 Score: 197 bits (502), Expect = 3.830e-58 Identity = 114/180 (63.33%), Postives = 139/180 (77.22%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFGRQLGATSSSTVDVG--TSNIALTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RALLRAADE VA A S L P+++WSA + +GR T+ + +D T+ I L A L+LYD G+ +E++KETVLATR+ L+ +EQQ+LLRA+ A+MGV +ASEFVALRQNN+RLLTQE RAA DRFEVGEVTRTDVALAQA+LAQARSGLA AQ DL+ A EY N+VG KPGRL
Sbjct: 52 RALLRAADEDVATAVSTLKPVLRWSASLTQSYGRARTTTNPNPIDTDDLTAAINLAADLVLYDFGARQFRVEAAKETVLATREALLDLEQQILLRAVSAYMGVIEASEFVALRQNNVRLLTQEQRAATDRFEVGEVTRTDVALAQAQLAQARSGLAAAQGDLVAAIEEYRNIVGRKPGRL 231
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: Outer (membrane efflux protein BepC n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4YP13_9CHEL) HSP 1 Score: 196 bits (498), Expect = 8.020e-58 Identity = 115/180 (63.89%), Postives = 138/180 (76.67%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFGRQLGATSSSTV--DVGTSNIALTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RALLRAADE VA A S L P+++WS + FGR ++S T+ D T+ I+L L+LYD GS +E++KE+VLATR+ LV IEQQVL RA+ A+MGV +A+EFVALRQNN+RLLTQELRAA DRFEVGEVTRTDVALAQA+LAQARSGLA A +LL A EY NV+G KPGRL
Sbjct: 52 RALLRAADEDVASAVSTLKPVLRWSTSLTQTFGRVRASSSPVTINNDDLTAAISLVGELVLYDFGSRQLRVEAAKESVLATREALVDIEQQVLFRAVRAYMGVIEATEFVALRQNNVRLLTQELRAAQDRFEVGEVTRTDVALAQAQLAQARSGLAQADGNLLSATEEYRNVIGRKPGRL 231
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: TolC (family outer membrane protein n=1 Tax=Sulfitobacter sp. JK7-1 TaxID=2829501 RepID=UPI001BAEB397) HSP 1 Score: 196 bits (499), Expect = 8.950e-58 Identity = 112/180 (62.22%), Postives = 143/180 (79.44%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFGRQLGATSSSTVDVGTSNIA--LTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RALLRAADE VA+A +AL P+++W+A AQ+ FGR G+T + D + ++ L LLLYD G++A +E++KETVLATR+TL+ IEQQVLLRA++A+MGV +A+EFVALRQNNLR+LTQELRAA +RFEVGEVTRTDVALA+A+LAQARSGLA A+ + A EY N+VG PG L
Sbjct: 44 RALLRAADEDVAVAGTALEPVLRWTASAQQQFGRARGSTLAGVQDTDSLTLSGSLIGELLLYDFGATALRVEAAKETVLATRETLLGIEQQVLLRAVQAYMGVIEANEFVALRQNNLRVLTQELRAARNRFEVGEVTRTDVALAEAQLAQARSGLATAEGNRQIAIEEYRNIVGRMPGAL 223
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: TolC (family outer membrane protein n=1 Tax=Sulfitobacter aestuariivivens TaxID=2766981 RepID=UPI00168AA371) HSP 1 Score: 196 bits (498), Expect = 1.230e-57 Identity = 119/180 (66.11%), Postives = 139/180 (77.22%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFG-RQLGATSSSTVDVGTS-NIALTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RALLRAADE VA A +AL P+++WS R FG RQ+ + S+ GTS ++ L A LLLYD G+S IE++KETVLATR TL+ IEQQVL RA+ A+MGV +ASE VALR NNLRLLTQELRAA DRFEVGEVTRTDVALA+A+LAQARSGLA AQ LL+A E+ NVVG PGRL
Sbjct: 43 RALLRAADEDVAAAQAALKPVLRWSGSVTRTFGTRQVSGSGFSSSVNGTSVDLGLIAELLLYDGGNSKLQIEATKETVLATRDTLINIEQQVLFRAVAAYMGVIEASESVALRNNNLRLLTQELRAARDRFEVGEVTRTDVALAEAQLAQARSGLAGAQGALLQATEEFRNVVGRAPGRL 222
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Match: Type (I secretion outer membrane protein, TolC family n=1 Tax=Roseobacter sp. (strain GAI101) TaxID=391589 RepID=B7RNT8_ROSS0) HSP 1 Score: 196 bits (497), Expect = 2.360e-57 Identity = 113/185 (61.08%), Postives = 145/185 (78.38%), Query Frame = 1
Query: 1 RALLRAADEGVAIAASALLPIIQWSAGAQRDFGRQLGATSS-------STVDVGTSNIALTASLLLYDSGSSAATIESSKETVLATRQTLVAIEQQVLLRAIEAFMGVRQASEFVALRQNNLRLLTQELRAANDRFEVGEVTRTDVALAQARLAQARSGLADAQADLLRAKAEYTNVVGHKPGRL 534
RA+LRAADE VAIA SAL P+++W+ ++F R + S+ ++ D T++I L ASLL+YD G+S ++E++KETVLATR+TLV+IEQQ+LLRA++A+MGV QA + V+LR+NN+RLLTQELRAA DRFEVGEVTRTDVALA+A+LAQARSGLA AQ DL+ AKA Y VG PGRL
Sbjct: 52 RAVLRAADEDVAIAKSALKPVVRWTGDLTQNFNRTISGGSAFALPGTRTSTDQLTTSINLIASLLVYDFGASRFSVEAAKETVLATRETLVSIEQQILLRAVDAYMGVIQAEQIVSLRENNMRLLTQELRAARDRFEVGEVTRTDVALAEAQLAQARSGLAGAQGDLISAKAYYKVAVGRAPGRL 236 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75777.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75777.1.1 >prot_H-canaliculatus_M_contigs75777.1.1 ID=prot_H-canaliculatus_M_contigs75777.1.1|Name=mRNA_H-canaliculatus_M_contigs75777.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=178bp RALLRAADEGVAIAASALLPIIQWSAGAQRDFGRQLGATSSSTVDVGTSNback to top mRNA from alignment at H-canaliculatus_M_contigs75777:2..535+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75777.1.1 ID=mRNA_H-canaliculatus_M_contigs75777.1.1|Name=mRNA_H-canaliculatus_M_contigs75777.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=534bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75777:2..535+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75777:2..535+ >mRNA_H-canaliculatus_M_contigs75777.1.1 ID=mRNA_H-canaliculatus_M_contigs75777.1.1|Name=mRNA_H-canaliculatus_M_contigs75777.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=534bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75777:2..535+ (Hapterophycus canaliculatus Oshoro7m male)back to top |