mRNA_H-canaliculatus_M_contigs7577.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: Molecular (chaperone, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD7_ECTSI) HSP 1 Score: 335 bits (858), Expect = 5.370e-105 Identity = 204/453 (45.03%), Postives = 256/453 (56.51%), Query Frame = 1
Query: 406 NASGTSSDGYRWEVLACVGFPLPEAFSLKSYLGELGYLELSRGALGQRRTGRQETVLKQSTNIEGLVSVTLEEAFKGKNVTVTVQRRVPCPVCHGFGAASFVPCDRCGGSGKHVHDNTLSNYSTPAIISPEKCHRPDTGTTATDAR-----VNDDGENCPSRDAFQE-------------NLSFYDCL------CRKAWSE----KGTGGEGGNDTGGLREGLGLKQTSDCAKCRGFGNVPAPRVDGEAS-YCALCAGSRFVEEEADLTLSIPIGVEKGHTEIYRGQGHIDIADLIEKLKPTGAGEETTTRDAARDEDSKTPNSTLSHRHPSPRTSSSAPSSXXPSVHASSDSSQ---STL---------------------------------RVKRGDFRLTVDVLPHPLYSP-EEGGADLHASISISLVEALTGFERDIAGLDGSIRTVR 1566
N + +GYRWEVLAC GFPLP+ F + S LG LG+ LSRGALG+ TG QE +KQST+IEGLVS+TLEEAF GK+V V ++RRVPCP CHG+GAASFVPCDRCGGSG+ +HD +LS+ TP P H + + ++R N G C S + + C CR+ E + + ND GG E L L +T+DCA+C G G VP P DG +C+ C G+RFVEE +L LSIP G+E GHTE+YRG+GH+D+ DL++ LKP + EE + DA T PSP P S P ASS +SQ TL ++K G+FRLTVDVLPHP++SP EEGGADLHA++SIS+ EALTGF R+I GLDGSI TVR
Sbjct: 26 NNEEVAGNGYRWEVLACAGFPLPKTFDVVSSLGGLGHFGLSRGALGRGLTGLQEATVKQSTDIEGLVSITLEEAFVGKDVAVNIRRRVPCPECHGYGAASFVPCDRCGGSGRRIHDISLSSDDTPPRSVPVMEHGANGCGRSGESREGGPHTNSTGSACVSHECGHRGGLGGGIYRGSGCHAGHVSCNGKSDPPCRRPEGEDVCVERAATDDDNDEGGDAERLRLTRTADCARCGGSGMVPTPSTDGGPPLFCSRCTGARFVEETVELLLSIPAGIENGHTEVYRGEGHVDLGDLLDTLKPRVSSEEASMDDA----------DTGKASGPSPAP---PPCSSRPYQGASSINSQWASPTLSPSXXXXXXXXXXXXXXXXXXXRGDFYASPPKKKLKMGNFRLTVDVLPHPVFSPTEEGGADLHATVSISVAEALTGFTREITGLDGSIVTVR 465
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J983_9PHAE) HSP 1 Score: 327 bits (837), Expect = 1.350e-101 Identity = 203/456 (44.52%), Postives = 258/456 (56.58%), Query Frame = 1
Query: 406 NASGTSSDGYRWEVLACVGFPLPEAFSLKSYLGELGYLELSRGALGQRRTGRQETVLKQSTNIEGLVSVTLEEAFKGKNVTVTVQRR-----------------VPCPVCHGFGAASFVPCDRCGGSGKHVHDNTLSNYSTPAIISPEKCHR--------------PDTGTTATDARVNDDGENCPSRDAFQENLSFY----------DCLCRKAWSE----KGTGGEGGNDTGGLREGLGLKQTSDCAKCRGFGNVPAPRVDGEAS-YCALCAGSRFVEEEADLTLSIPIGVEKGHTEIYRGQGHIDIADLIEKLKPTGAGEETTTRDAARDEDSKT-----PNSTLSHRHPSPRTSSSAPSSXXPSVHASSDS-------SQST----------LRVKRGDFRLTVDVLPHPLYSP-EEGGADLHASISISLVEALTGFERDIAGLDGSIRTVR 1566
N + GYRWEVLACVGFPLP+AF + S LG LG+ ELSRGALG+ TG QE +KQST+IEGLVS+TLEEAF GK+V V ++RR VPCP CHG+GAASFVPCDRCGGSG+ +HD +LS+ T P H P+T +T + ++ G Y D CR+ E + + ND GG E L L +T+DCA+C G G VP P DG +C+ C G+RFVEE +L L+IP GV+ GHTE+YRG+GH+D DL++ KP + EE DA + S + P S+ + S S A + PS +S S S+ST ++K G+FRLTVDVLPHP++SP EEGGADLHA++SIS+ EALTGF R+I GLDGSI TVR
Sbjct: 26 NKEEVAGHGYRWEVLACVGFPLPKAFDVVSSLGGLGHFELSRGALGRGLTGLQEATVKQSTDIEGLVSITLEEAFVGKDVAVDIRRRSAKPQTLISPICSLFFKVPCPECHGYGAASFVPCDRCGGSGRRIHDISLSSEDTSPRSIPVMEHGARGCGSSGESGEGDPNTNSTGSACVAHECGHRDGLGGGVYRGSGCYAGHVSCNGESDPPCRRPEGEDVCVERAATDDNNDEGGAAERLRLTRTADCARCGGSGMVPTPSADGGPPLFCSRCTGARFVEETVNLVLTIPAGVKNGHTEVYRGEGHVDFGDLLDTQKPRASSEEANMSDADAGKASGSSPAPPPCSSRPYEGASSIKSQWASPTFSPSSSSSPFSPXXXXXXSESTPGGFYASPPKTKLKTGNFRLTVDVLPHPVFSPAEEGGADLHATVSISVAEALTGFTREITGLDGSIVTVR 481
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: dnaJ (homolog subfamily B member 11-like n=1 Tax=Cariama cristata TaxID=54380 RepID=UPI000520828D) HSP 1 Score: 64.7 bits (156), Expect = 7.040e-9 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1405 GDFRLTVDVLPHPLYSPEEGGADLHASISISLVEALTGFERDIAGLDGSIRTVRRRSRTFPGMLLRFPGLGMP 1623
GD R + VL HP++ E G DL+ +++ISLVEALTGFE DIA LDG V R T PG L G G+P
Sbjct: 9 GDLRFRIKVLKHPVF--ERRGDDLYTNVTISLVEALTGFEMDIAHLDGHKVHVARDKITKPGAKLWKKGEGLP 79
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: DJB11 (protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K8Q1L6_COCCO) HSP 1 Score: 65.9 bits (159), Expect = 1.350e-8 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1405 GDFRLTVDVLPHPLYSPEEGGADLHASISISLVEALTGFERDIAGLDGSIRTVRRRSRTFPGMLLRFPGLGMP 1623
GD R + VL HP+Y E G DL+ +++ISLVEALTGFE DIA LDG + R T PG L G G+P
Sbjct: 103 GDLRFRIKVLKHPVY--ERRGDDLYTNVTISLVEALTGFEMDIAHLDGHKVHIARDKITKPGAKLWKKGEGLP 173
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: DnaJ (protein subfamily B member 11 (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293N723_ORNER) HSP 1 Score: 65.9 bits (159), Expect = 1.860e-8 Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1405 GDFRLTVDVLPHPLYSPEEGGADLHASISISLVEALTGFERDIAGLDGSIRTVRRRSRTFPGMLLRFPGLGMP 1623
GD +L + LPHP++ E G DL+ +I+ISL +AL GFE +I LDG TV R T+PG LR GMP
Sbjct: 102 GDLKLKIRTLPHPVF--ERKGDDLYTNITISLTDALVGFETEITHLDGHKVTVSREKVTWPGARLRKKNEGMP 172
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: DJB11 (protein (Fragment) n=3 Tax=Aves TaxID=8782 RepID=A0A7K5DFF8_9TYRA) HSP 1 Score: 66.2 bits (160), Expect = 4.480e-8 Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1405 GDFRLTVDVLPHPLYSPEEGGADLHASISISLVEALTGFERDIAGLDGSIRTVRRRSRTFPGMLLRFPGLGMP 1623
GD R + VL HP+Y E G DL+ +++ISLVEALTGFE DIA LDG V R T PG L G G+P
Sbjct: 221 GDLRFRIKVLKHPVY--ERRGDDLYTNVTISLVEALTGFEMDIAHLDGHKVHVARDKITKPGAKLWKKGEGLP 291
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: DJB11 (protein (Fragment) n=1 Tax=Ceuthmochares aereus TaxID=1961834 RepID=A0A7L4KEY2_9AVES) HSP 1 Score: 64.7 bits (156), Expect = 5.440e-8 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1405 GDFRLTVDVLPHPLYSPEEGGADLHASISISLVEALTGFERDIAGLDGSIRTVRRRSRTFPGMLLRFPGLGMP 1623
GD R + VL HP++ E G DL+ +++ISLVEALTGFE DIA LDG V R T PG L G G+P
Sbjct: 133 GDLRFKIKVLKHPVF--ERRGDDLYTNVTISLVEALTGFEMDIAHLDGHKVHVARDKITKPGAKLWKKGEGLP 203
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: DJB11 (protein (Fragment) n=1 Tax=Syrrhaptes paradoxus TaxID=302527 RepID=A0A7L3AHV1_9AVES) HSP 1 Score: 64.7 bits (156), Expect = 5.520e-8 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1405 GDFRLTVDVLPHPLYSPEEGGADLHASISISLVEALTGFERDIAGLDGSIRTVRRRSRTFPGMLLRFPGLGMP 1623
GD R + VL HP++ E G DL+ +++ISLVEALTGFE DIA LDG V R T PG L G G+P
Sbjct: 133 GDLRFRIKVLKHPVF--ERRGDDLYTNVTISLVEALTGFEMDIAHLDGHKVHVARDKITKPGAKLWKKGEGLP 203
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: J (domain-containing protein (Fragment) n=2 Tax=Ornithodoros TaxID=6937 RepID=A0A293LPZ5_ORNER) HSP 1 Score: 65.9 bits (159), Expect = 6.280e-8 Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1405 GDFRLTVDVLPHPLYSPEEGGADLHASISISLVEALTGFERDIAGLDGSIRTVRRRSRTFPGMLLRFPGLGMP 1623
GD +L + LPHP++ E G DL+ +I+ISL +AL GFE +I LDG TV R T+PG LR GMP
Sbjct: 207 GDLKLKIRTLPHPVF--ERKGDDLYTNITISLTDALVGFETEITHLDGHKVTVSREKVTWPGARLRKKNEGMP 277
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Match: DJB11 (protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K4SC10_COLPI) HSP 1 Score: 64.7 bits (156), Expect = 9.830e-8 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1405 GDFRLTVDVLPHPLYSPEEGGADLHASISISLVEALTGFERDIAGLDGSIRTVRRRSRTFPGMLLRFPGLGMP 1623
GD R + VL HP++ E G DL+ +++ISLVEALTGFE DIA LDG V R T PG L G G+P
Sbjct: 162 GDLRFRIKVLKHPVF--ERRGDDLYTNVTISLVEALTGFEMDIAHLDGHKVHVARDKITKPGAKLWKKGEGLP 232 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7577.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7577.1.1 >prot_H-canaliculatus_M_contigs7577.1.1 ID=prot_H-canaliculatus_M_contigs7577.1.1|Name=mRNA_H-canaliculatus_M_contigs7577.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=625bp RTVQRDILSCTLRAELTEQPESKVSYCPVENRVKLKRSSGSHPSKGESCEback to top mRNA from alignment at H-canaliculatus_M_contigs7577:324..3931- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7577.1.1 ID=mRNA_H-canaliculatus_M_contigs7577.1.1|Name=mRNA_H-canaliculatus_M_contigs7577.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3608bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7577:324..3931- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7577:324..3931- >mRNA_H-canaliculatus_M_contigs7577.1.1 ID=mRNA_H-canaliculatus_M_contigs7577.1.1|Name=mRNA_H-canaliculatus_M_contigs7577.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1875bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7577:324..3931- (Hapterophycus canaliculatus Oshoro7m male)back to top |