mRNA_H-canaliculatus_M_contigs75720.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Jannaschia sp. (strain CCS1) TaxID=290400 RepID=Q28LR8_JANSC) HSP 1 Score: 253 bits (647), Expect = 5.330e-84 Identity = 121/131 (92.37%), Postives = 126/131 (96.18%), Query Frame = 1
Query: 1 YLYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAAMM 393
+LYAFDEDQNILLVEPIRVDIGGGD+GAI AG VVASHYVFFDS+NGT YGYVDFDAPILGVAALRE+MAATDFLANT VTYLSLELRGLERGDQVWID DDPFRLWVYWAGSSPGDYIRVFT+RSAAAMM
Sbjct: 86 HLYAFDEDQNILLVEPIRVDIGGGDLGAIPAGNVVASHYVFFDSINGTQYGYVDFDAPILGVAALRETMAATDFLANTDVTYLSLELRGLERGDQVWIDADDPFRLWVYWAGSSPGDYIRVFTARSAAAMM 216
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Jannaschia sp. EhC01 TaxID=1849359 RepID=A0A1B6YPG2_9RHOB) HSP 1 Score: 251 bits (642), Expect = 1.470e-83 Identity = 120/130 (92.31%), Postives = 126/130 (96.92%), Query Frame = 1
Query: 4 LYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAAMM 393
LYAFDEDQNILLVEPIRVDIGGGD+GAI AGTVVASHYVFFDSLNGT YGYVDFDAPILG+AA +E+MAATDFLANT+VTYLSLELRGLERGDQVWID DDPFRLWVYWAGSSPGDYIRVFT+RSAAAMM
Sbjct: 65 LYAFDEDQNILLVEPIRVDIGGGDLGAIPAGTVVASHYVFFDSLNGTQYGYVDFDAPILGIAAQQETMAATDFLANTAVTYLSLELRGLERGDQVWIDADDPFRLWVYWAGSSPGDYIRVFTARSAAAMM 194
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Roseibacterium sp. TaxID=2003362 RepID=A0A7C7VF36_9RHOB) HSP 1 Score: 242 bits (618), Expect = 5.100e-80 Identity = 112/129 (86.82%), Postives = 124/129 (96.12%), Query Frame = 1
Query: 1 YLYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAA 387
+LYAFDEDQNILL+EPIRVDIGGGD+GAI +GT+VASHYVFFDS+NGTHYGYVDFDAPILG+AA +ESMAATDFLANTSVTYLSLELRGLERGD VWIDE DP RLWVYWAGSSPGDYIRVFT++S++A
Sbjct: 55 HLYAFDEDQNILLIEPIRVDIGGGDLGAIVSGTIVASHYVFFDSINGTHYGYVDFDAPILGIAAFQESMAATDFLANTSVTYLSLELRGLERGDHVWIDEADPHRLWVYWAGSSPGDYIRVFTAQSSSA 183
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) TaxID=398580 RepID=A8LII2_DINSH) HSP 1 Score: 213 bits (542), Expect = 1.780e-68 Identity = 103/131 (78.63%), Postives = 112/131 (85.50%), Query Frame = 1
Query: 1 YLYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAAMM 393
+LYAFDEDQNI L PIRVDIGG D G I AG VVASHYVFFDS++G YGYV+FDAPILG+AA +M ATDFLANT VTYLS +LRGLERGD+VWID D+PFRLWVYWAGSSPGDYIRVFT RS AAMM
Sbjct: 55 HLYAFDEDQNIALAAPIRVDIGGQD-GVIPAGQVVASHYVFFDSIDGVQYGYVEFDAPILGIAAQPGTMDATDFLANTDVTYLSTDLRGLERGDEVWIDPDNPFRLWVYWAGSSPGDYIRVFTERSPAAMM 184
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Labrenzia sp. THAF82 TaxID=2587861 RepID=A0A5P9CZV3_9HYPH) HSP 1 Score: 208 bits (530), Expect = 1.230e-66 Identity = 101/131 (77.10%), Postives = 110/131 (83.97%), Query Frame = 1
Query: 1 YLYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAAMM 393
+LYAFDEDQNILL EPIRVDIGG D G I GT VASHYVFFDSL+G H GYVDFDAPILG+AAL +++ ATDFLAN SV Y+S +LRGLE GD VWID DDPFRLWV WAGSSPGDYIRVFT +S AMM
Sbjct: 56 HLYAFDEDQNILLSEPIRVDIGG-DRGMIPQGTTVASHYVFFDSLSGVHEGYVDFDAPILGIAALPDTLDATDFLANNSVNYISTDLRGLEPGDYVWIDPDDPFRLWVLWAGSSPGDYIRVFTEKSLGAMM 185
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Roseibium album TaxID=311410 RepID=A0A0M6Z840_9HYPH) HSP 1 Score: 208 bits (530), Expect = 1.230e-66 Identity = 98/130 (75.38%), Postives = 109/130 (83.85%), Query Frame = 1
Query: 4 LYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAAMM 393
LYAFDEDQNILL EPIRVD GG D G I+ G VASHYVFFDSL G HYGYVDFDAP+LG+AA +++MAATDFLAN SV Y+S ELRGLE GD+VW+D DP RLWV+WAGSSPGDYIRVFT +S AMM
Sbjct: 57 LYAFDEDQNILLTEPIRVDFGG-DNGVIAQGETVASHYVFFDSLAGVHYGYVDFDAPVLGIAAFQDTMAATDFLANNSVNYISTELRGLEPGDRVWVDGQDPHRLWVFWAGSSPGDYIRVFTEKSLGAMM 185
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Labrenzia sp. PHM005 TaxID=2590016 RepID=A0A4Y6RNX7_9HYPH) HSP 1 Score: 206 bits (523), Expect = 1.430e-65 Identity = 100/131 (76.34%), Postives = 109/131 (83.21%), Query Frame = 1
Query: 1 YLYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAAMM 393
+LYAFDEDQNILL EP+RVDIGG D G I G VVASHYVFFDSL G H GYVDFDAPILG+AAL ++ ATDFLANTSV Y+S +LRGLE GD VW+D DPFRLWV+WAGSSPGDYIRVFT RS AMM
Sbjct: 56 HLYAFDEDQNILLSEPLRVDIGG-DRGIIPQGKVVASHYVFFDSLAGIHEGYVDFDAPILGIAALPATLDATDFLANTSVNYISTDLRGLEPGDYVWVDPKDPFRLWVFWAGSSPGDYIRVFTERSPGAMM 185
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Amylibacter sp. SFDW26 TaxID=2652722 RepID=A0A6I1E9G6_9RHOB) HSP 1 Score: 205 bits (522), Expect = 1.620e-65 Identity = 98/129 (75.97%), Postives = 108/129 (83.72%), Query Frame = 1
Query: 4 LYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAAM 390
LYAFDEDQNI+L EPI VDIGG G I G +ASHY+FFDSL+G HYGYVDFDA ILGVAA + +MAATDFLANTSV Y+S ELRGLE GD VWIDE+DP RLWVYWAGSSPGDYIRVFT +SA A+
Sbjct: 50 LYAFDEDQNIILSEPISVDIGGNQ-GVIHQGETIASHYIFFDSLSGIHYGYVDFDAKILGVAAFQGTMAATDFLANTSVNYISTELRGLEEGDYVWIDENDPQRLWVYWAGSSPGDYIRVFTKKSAGAL 177
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Tateyamaria omphalii TaxID=299262 RepID=UPI001675004C) HSP 1 Score: 205 bits (521), Expect = 2.890e-65 Identity = 100/130 (76.92%), Postives = 110/130 (84.62%), Query Frame = 1
Query: 4 LYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAAMM 393
LY FDEDQNI LVEPIRVDIG + G I AGT+VASHYVFFDSL+G H GYVDFDAPILGVAA + +MAATDFLANT VTYLS ELRGLE+GD VWIDE+ P RLWVYWAGSSPGDY+RVFT S A++
Sbjct: 56 LYGFDEDQNITLVEPIRVDIGN-EQGWIPAGTIVASHYVFFDSLSGIHTGYVDFDAPILGVAAFQGTMAATDFLANTGVTYLSTELRGLEQGDYVWIDENLPSRLWVYWAGSSPGDYVRVFTEESKGALL 184
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Match: hypothetical (protein n=1 Tax=Shimia sp. WX04 TaxID=2582893 RepID=UPI0011BF8791) HSP 1 Score: 201 bits (510), Expect = 1.240e-63 Identity = 98/131 (74.81%), Postives = 110/131 (83.97%), Query Frame = 1
Query: 1 YLYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYGYVDFDAPILGVAALRESMAATDFLANTSVTYLSLELRGLERGDQVWIDEDDPFRLWVYWAGSSPGDYIRVFTSRSAAAMM 393
+LYAFDEDQNI L+EP+R+DIG + G I AGTVVASHYVFFDSL+G H G+VDF APILGVAA +++MAATDFLANT VT +S LRGLERGD VWIDEDDP RLWV WAGSSPGDYIRVFT +S A M
Sbjct: 53 HLYAFDEDQNITLIEPLRIDIGN-EGGMIPAGTVVASHYVFFDSLDGFHMGHVDFHAPILGVAAQQDTMAATDFLANTQVTCISTGLRGLERGDLVWIDEDDPHRLWVSWAGSSPGDYIRVFTEKSPALFM 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75720.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs75720.1.1 >prot_H-canaliculatus_M_contigs75720.1.1 ID=prot_H-canaliculatus_M_contigs75720.1.1|Name=mRNA_H-canaliculatus_M_contigs75720.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=132bp YLYAFDEDQNILLVEPIRVDIGGGDIGAISAGTVVASHYVFFDSLNGTHYback to top mRNA from alignment at H-canaliculatus_M_contigs75720:2..397+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs75720.1.1 ID=mRNA_H-canaliculatus_M_contigs75720.1.1|Name=mRNA_H-canaliculatus_M_contigs75720.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=396bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75720:2..397+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75720:2..397+ >mRNA_H-canaliculatus_M_contigs75720.1.1 ID=mRNA_H-canaliculatus_M_contigs75720.1.1|Name=mRNA_H-canaliculatus_M_contigs75720.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=396bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75720:2..397+ (Hapterophycus canaliculatus Oshoro7m male)back to top |