mRNA_H-canaliculatus_M_contigs75700.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs75700.1.1
Unique NamemRNA_H-canaliculatus_M_contigs75700.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Mitogen-activated (protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I1_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 3.850e-32
Identity = 60/65 (92.31%), Postives = 64/65 (98.46%), Query Frame = 1
Query:    1 QVFLEAHYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLTFVTNKKVTL 195
            +VFLEA+YGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADL+FVTNKK +L
Sbjct:  319 EVFLEANYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLSFVTNKKFSL 383          
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Mitogen-activated (protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV3_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.120e-31
Identity = 59/62 (95.16%), Postives = 62/62 (100.00%), Query Frame = 1
Query:    1 QVFLEAHYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLTFVTNKK 186
            +VFLEA+YGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADL+FVTNKK
Sbjct:  340 EVFLEANYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLSFVTNKK 401          
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Mitogen-activated (protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKF4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.210e-20
Identity = 43/63 (68.25%), Postives = 54/63 (85.71%), Query Frame = 1
Query:    1 QVFLEAHYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKP-SEADLTFVTNKK 186
            +VFLEA Y  AIDVWSAGCI+AEMLQ+KPLFMG+NTAQML+L+V F G+  + ADL F++N+K
Sbjct:  308 EVFLEAKYNVAIDVWSAGCILAEMLQKKPLFMGNNTAQMLKLIVAFCGRARTAADLAFISNRK 370          
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Mitogen-activated (protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD69_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.080e-20
Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 1
Query:    1 QVFLEAHYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEA-DLTFVTNKK 186
            +VFLEA Y  AIDVWSAGCIMAEM+ +KPLFMGSNTAQML+L++ F GK S+  DL+FV N+K
Sbjct:  307 EVFLEAKYNVAIDVWSAGCIMAEMMLKKPLFMGSNTAQMLKLILGFCGKNSDTIDLSFVANRK 369          
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RBZ0_9CHLO)

HSP 1 Score: 74.3 bits (181), Expect = 3.660e-15
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 1
Query:   19 HYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLTFVTNKK 186
            HY +AIDVWS GCI+AEML RKPL  GS+    L+L+++  G+P E DLTF+T+ K
Sbjct:    2 HYSSAIDVWSVGCILAEMLGRKPLLPGSDYVDQLKLIIKTLGQPPEDDLTFITSSK 57          
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Mitogen-activated (protein kinase (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS7_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 5.700e-15
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 1
Query:    1 QVFLEAHYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPS-EADLTFVTNKK 186
            ++ L A YG  ID+WS GCI AEML+R+PLF G    QML+L+ +F GKP  E++L FVTN K
Sbjct:  295 EIMLAAEYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPKDESELAFVTNPK 357          
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Mitogen-activated (protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8Q9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.950e-14
Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 1
Query:   22 YGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLTFVTNKKVTLLFLVRL 213
            Y  ++DVWSAGCI AEMLQRKPLF G N   +LRL+ + TG  +EADL FV+N       L RL
Sbjct:  305 YNKSVDVWSAGCIFAEMLQRKPLFPGDNYRHVLRLITKVTGSATEADLWFVSNANAKAYMLQRL 368          
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Mitogen-activated (protein kinase n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VG28_9CHLO)

HSP 1 Score: 73.6 bits (179), Expect = 1.150e-13
Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 1
Query:   19 HYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLTFVTNKK 186
            HY TAID+WS GCIMAE+L R+PL  G +    L+L+++  G PSE DLTF+T+ K
Sbjct:  247 HYSTAIDIWSVGCIMAELLGRRPLLPGKDYVDQLKLIIKTLGPPSEDDLTFITSHK 302          
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XGH7_9CHLO)

HSP 1 Score: 72.4 bits (176), Expect = 1.370e-13
Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 1
Query:   19 HYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLTFVTNKK 186
            HY  AID+WS GCIMAE+L RKPLF G +    L+L+++  G PSE DLTF+ ++K
Sbjct:  114 HYTAAIDMWSVGCIMAELLGRKPLFPGKDYVDQLKLIIKTLGPPSEDDLTFINSQK 169          
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Match: Mitogen-activated (protein kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XV35_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 2.050e-13
Identity = 29/56 (51.79%), Postives = 42/56 (75.00%), Query Frame = 1
Query:   19 HYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLTFVTNKK 186
            HY  AID+WS GCI+AE+LQRKPLF G +    L+L+++  G PS+ DL+F+ ++K
Sbjct:  219 HYTAAIDIWSVGCILAELLQRKPLFPGKDYIDQLKLIIKTLGSPSDTDLSFINSQK 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75700.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Mitogen-activated3.850e-3292.31protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
Mitogen-activated3.120e-3195.16protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
Mitogen-activated2.210e-2068.25protein kinase n=1 Tax=Tribonema minus TaxID=30337... [more]
Mitogen-activated4.080e-2069.84protein kinase n=1 Tax=Tribonema minus TaxID=30337... [more]
Hypothetical3.660e-1557.14protein n=2 Tax=Chlamydomonas leiostraca TaxID=103... [more]
Mitogen-activated5.700e-1555.56protein kinase (Fragment) n=2 Tax=Ectocarpus TaxID... [more]
Mitogen-activated1.950e-1456.25protein kinase n=2 Tax=Monodopsidaceae TaxID=42507... [more]
Mitogen-activated1.150e-1355.36protein kinase n=1 Tax=Chlamydomonas euryale TaxID... [more]
Protein1.370e-1355.36kinase domain-containing protein n=1 Tax=Edaphochl... [more]
Mitogen-activated2.050e-1351.79protein kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=26... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75700contigH-canaliculatus_M_contigs75700:116..328 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G0I1
PFAMsPkinase
Model size213
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.31e-33
EggNOG OGsKOG0660@1|root,KOG0660@2759|Eukaryota
DescriptionMAP kinase activity
Cds size213
COG categoryH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854094.1269991-CDS-H-canaliculatus_M_contigs75700:115..3281696854094.1269991-CDS-H-canaliculatus_M_contigs75700:115..328Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs75700 116..328 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75700.1.1prot_H-canaliculatus_M_contigs75700.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs75700 116..328 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs75700.1.1

>prot_H-canaliculatus_M_contigs75700.1.1 ID=prot_H-canaliculatus_M_contigs75700.1.1|Name=mRNA_H-canaliculatus_M_contigs75700.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=71bp
QVFLEAHYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKP
SEADLTFVTNKKVTLLFLVRL
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mRNA from alignment at H-canaliculatus_M_contigs75700:116..328-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs75700.1.1 ID=mRNA_H-canaliculatus_M_contigs75700.1.1|Name=mRNA_H-canaliculatus_M_contigs75700.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=213bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75700:116..328- (Hapterophycus canaliculatus Oshoro7m male)
CAGGTGTTCCTAGAGGCCCACTACGGGACAGCCATCGACGTATGGTCCGC GGGCTGCATCATGGCGGAGATGCTTCAGCGGAAGCCGCTCTTCATGGGCT CCAACACGGCGCAGATGCTCCGGCTGGTGGTGCAGTTCACTGGAAAACCG TCGGAGGCGGACCTCACCTTCGTAACGAATAAAAAGGTGACACTGTTGTT CCTTGTACGATTA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs75700:116..328-

>mRNA_H-canaliculatus_M_contigs75700.1.1 ID=mRNA_H-canaliculatus_M_contigs75700.1.1|Name=mRNA_H-canaliculatus_M_contigs75700.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=213bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs75700:116..328- (Hapterophycus canaliculatus Oshoro7m male)
CAGGTGTTCCTAGAGGCCCACTACGGGACAGCCATCGACGTATGGTCCGC
GGGCTGCATCATGGCGGAGATGCTTCAGCGGAAGCCGCTCTTCATGGGCT
CCAACACGGCGCAGATGCTCCGGCTGGTGGTGCAGTTCACTGGAAAACCG
TCGGAGGCGGACCTCACCTTCGTAACGAATAAAAAGGTGACACTGTTGTT
CCTTGTACGATTA
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