mRNA_H-canaliculatus_M_contigs7485.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM20_ECTSI) HSP 1 Score: 475 bits (1222), Expect = 1.340e-162 Identity = 239/287 (83.28%), Postives = 260/287 (90.59%), Query Frame = 1
Query: 1 GEWAEEMRVKDELISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDASVEMEHALEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIFHADLDGLRGGGLSPALAKRIFDRKVLWLVRAPQGMVSKTHVVELKSKFLANDLDVVESRALHACLPSKFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVYKGMAQGPFDPDAAAEEQETMRSSAFDASEKPVVGGKLEASKIAVIGEGLASKLKPGPTSERSMADLK 861
GEWAE++R+KDELIS L+RQL LGEQP+EE+VTLEEAKKRLREAIDALM+GDAS EME ALEKWDKYVTNHPDHIKEQAAEEQAWE NEPKNNEAL LMKTFVPPDIFHA LDGLRGGGL+PALAKR+FDRKVLWL+RAP GMVSKTHVVELKSK+LANDLDVVESRALHACLPS FEND+DGAKT WRAGFR+RLKELL KE G LKPAE+RRPVYK + +GPFDPDAAAEEQETMRSSAFDASEKPVVGGKL+AS IAVIG+GL +KLK GP ++D K
Sbjct: 21 GEWAEQVRIKDELISTLRRQLTALGEQPIEEVVTLEEAKKRLREAIDALMAGDASAEMELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRMFDRKVLWLIRAPIGMVSKTHVVELKSKYLANDLDVVESRALHACLPSTFENDADGAKTAWRAGFRKRLKELLDKEAAGQLKPAELRRPVYKDIEKGPFDPDAAAEEQETMRSSAFDASEKPVVGGKLKASAIAVIGDGLGAKLKTGPPPLDPISDTK 307
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMF6_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.670e-52 Identity = 101/245 (41.22%), Postives = 155/245 (63.27%), Query Frame = 1
Query: 40 ISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDASVEMEHALEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIFHADLDGLRGGGLSPALAKRIFDRKVLWLVRAPQGMVSKTHVVELKSKFLANDLDVVESRALHACLPSKFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVYKGMAQGP--FDPDAAAEEQETMRSSAFDASEKPVVGGK 768
I LK QL G +P++E+V+LEEAK+RL+ A++ ++ G+ +++ +KWD+Y+ HP+H +EQ + WE +N KN +ALR ++TFVPPDI++A LDGL+ G+ LAKR++DRK+LW R+ +++KTH +LK KF LD+ E RA+ A LP F+NDS G K WR F +LKE++ +E+ L A+ +++ A P FDPDA + +T++ AFD P V +
Sbjct: 660 IEMLKLQLKNAGVKPIDEVVSLEEAKQRLKRAVEQMIGGNEDAQVD--FDKWDEYIRCHPEHKEEQQRLAREWEEKNREKNEQALRALRTFVPPDIYYATLDGLKLRGVQTPLAKRLWDRKILWWCRSEPSIIAKTHAADLKVKFAFQGLDLRELRAVSAMLPQTFDNDSTGDKKKWRENFMTKLKEMVQQEEQNRLPAAQQ---IHRTYADHPELFDPDAESVLVQTVKGGAFDKVVAPPVSSR 899
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6X4_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.080e-49 Identity = 92/220 (41.82%), Postives = 143/220 (65.00%), Query Frame = 1
Query: 19 MRVKDELISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDASVEMEHA-LEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIFHADLDGLRGGGLSPALAKRIFDRKVLWLVRAPQGMVSKTHVVELKSKFLANDLDVVESRALHACLPSKFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVYKGMAQ 675
++ K+ I+ L +QL + G+Q + E+V+L++A+ L+EA+ LMSG+ +++ A +KWD++V NHP+ I ++ A+ +AW++ P N AL+LM+TFVPP+I+ + L L+ GL L KR++++KVLWL RAP+ +++ HV +L K+ LD++E RA+ A LP KFEND D K GWR RLKEL+ ED G L R YK +A+
Sbjct: 239 LKEKETHIAMLIKQLESHGDQAITEVVSLDKAQASLQEALGQLMSGEGNLDAAQAEFDKWDRFVRNHPEFIAQEQAKREAWDQAQAPLNTSALQLMRTFVPPNIWSSSLTTLKDSGLPSGLVKRLWEKKVLWLTRAPKDFIARIHVADLNMKYSIQGLDLMELRAVWAALPEKFENDGDDRKAGWRLKIHDRLKELVSSEDRGSLSGPLRRHASYKSVAR 458
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCH3_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.200e-44 Identity = 86/219 (39.27%), Postives = 131/219 (59.82%), Query Frame = 1
Query: 13 EEMRVKDELISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDASVEMEHALEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIFHADLDGLRGGGLSPALAKRIFDRKVLWLVRAPQGMVSKTHVVELKSKFLANDLDVVESRALHACLPSKFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVYKGM 669
EE + ++ LK QL +G +P+E VTL+ A+++++EA+ LM+GD E + +EKWD + +P++ +EQ + + W +N+ KN EA R M+ VPPDI L L GL ALAKR++D+K+LW++R ++ H +L++K+ LD++E RA+ LP FEND DG K WR FRQ+L+EL KE+ L E R YK +
Sbjct: 65 EETATLQKQVAMLKHQLKAVGAEPVE-CVTLDVAREKMQEAVQRLMAGDEMAEKD--IEKWDTAIKMNPEYQQEQEEKARKWAEDNKEKNEEACRTMRGLVPPDIKQCSLKTLMERGLPRALAKRLWDKKILWMLRMHPLDIALIHQADLRAKYPNQGLDIIEMRAVWTVLPEDFENDGDGKKAEWRFNFRQKLEELTTKEEQNRLARNEKRNNAYKDL 280
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G2R7_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.740e-41 Identity = 99/263 (37.64%), Postives = 143/263 (54.37%), Query Frame = 1
Query: 28 KDELISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDASVEMEHALEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIFHADLDGLRGGGLSPALAKRIFDRKVLWLVRAP-QGMVSKTHVVELKSKFLANDLDVVESRALHACLPSKFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVYKGMAQGPFDPD-----AAAEEQETMRSSAFDASEKPVVGGKLEASKIAVIG 798
K LI L QL +P+ E+V LEEAK+R++ A+ ++ GD +E E +KWD Y+ HPD+++++A + W + + AL+LM +++P DIF+ L G+SPALA+RIFD+KVLW +R P Q ++K H +L K+ LD+VE++A+ A +P KFEND G K WR +L+EL K D G L EVR Y G FDP+ A E + + S K V G K + IG
Sbjct: 154 KGTLIQLLMSQLKGANIEPILEVVGLEEAKERMKNAVSLMLQGD--IEAEAVFDKWDTYIRAHPDYVRDEARKLAEWTESTKRDCDIALQLMLSYIPGDIFNISKAELINRGVSPALARRIFDKKVLWWLRLPNQSTIAKMHGADLTYKYSMQGLDLVETQAVWAVVPDKFENDRSGEKEQWRQNCLLKLRELTKKRDKGTLAKKEVRAAAYNDQI-GLFDPETGLRVAGLENKPVVEMRPKTPSRKSVGGLKSSNDLMGAIG 413
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q7_9STRA) HSP 1 Score: 151 bits (382), Expect = 5.290e-41 Identity = 85/208 (40.87%), Postives = 125/208 (60.10%), Query Frame = 1
Query: 40 ISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDASVEMEHALEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIFHADLDGLRGGGLSPALAKRIFDRKVLWLVRAPQGMVSKTHVVELKSKFLANDLDVVESRALHACLPSKFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVYK 663
I+ LK+QL + G+ +E V+LE AK+R+++A+ LM+GD S E + +++WDK + HPD+ KEQ + WE +N N +AL LM+ FVPPDI + + + G+ AKRI+ KVL VR + K H+ +L++ + LDVVE RA+ A +P +F+ DSD K WR F Q+L+EL KE G L E R P +K
Sbjct: 48 IALLKKQLASTGQVALE-FVSLETAKERMQQAVTKLMAGDESAEKD--IDRWDKTIRMHPDYAKEQEERAKQWEADNLAANQQALALMRKFVPPDIGASSIAKMAAEGVPAVAAKRIWKVKVLHWVRWHPDDIKKVHIADLQTTYSNQGLDVVEMRAVWAAMPQEFDLDSDAKKAQWRLFFCQKLQELTTKEASGMLSRNERRNPAWK 252
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2P6FUZ7_9RHOB) HSP 1 Score: 145 bits (367), Expect = 4.680e-38 Identity = 79/210 (37.62%), Postives = 119/210 (56.67%), Query Frame = 1
Query: 34 ELISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDASVEMEHALEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIF-HADLDGLRGGGLSPALAKRIFDRKVLWLVRAPQGMVSKTHVVELKSKFLANDLDVVESRALHACLPSKFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVY 660
E I LK QL G +P+ EI + E+ K +LR A++A++ D+ + ++ +EKWD+++ NHP IKEQ E + WE + +A K ++P DIF +A + L G+S LA RI + LWLVR + V+ H+ +LK K+ LD++E RAL++CLP KF+ND + K W+ Q LK+L KE L +R Y
Sbjct: 77 EHIELLKSQLENAGIRPISEITSYEDGKSQLRSALEAVIKEDSFLNLKE-VEKWDEFIKNHPQFIKEQKEENKIWEANAQVAAEKARNEQKKYIPEDIFKNASIINLNNYGVSKNLATRIMRNRALWLVRMDKKDVANVHIADLKFKYSFTGLDIIELRALYSCLPDKFDNDXNNEKEDWKNSLIQSLKDLENKEKNNTLPKRLIRNSAY 285
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3I4_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.150e-37 Identity = 83/216 (38.43%), Postives = 122/216 (56.48%), Query Frame = 1
Query: 91 EIVTLEEAKKRLREAIDALMSGDASVEMEHALEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIFHADLDGLRGGGLSPALAKRIFDRKVLWLVRAPQGMVSKTHVVELKSKFLANDLDVVESRALHACLPSKFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVYKGMAQGPFDPDAAAEEQETMRSSAFD 738
E VTLE+A+ R R A++A DA++ W + HP++I+ Q E +AWE + +PK +EAL +M+TF+PP LD L GLS ALA+RI + L LVR ++K H +L + ++ LD++E RA++A LP+ F+ D DG K WR R +LK L +E G L E+R Y + GPFDP A + + + S A+D
Sbjct: 2 EYVTLEKAENRFRAALEAENYDDAAL--------WGDIIKVHPEYIEAQRRENEAWEIKIKPKCDEALTIMRTFIPPTPTKWTLDKLVEAGLSLALARRIRRMRALHLVRLHPDDIAKIHAADLTHTYASSGLDIIELRAMYAVLPASFDADPDGKKAKWRDAVRDKLKGLETRESAGTLTKNEIRAGAYANTS-GPFDPHEAVQRRSFVTSQAYD 208
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVV0_AURAN) HSP 1 Score: 148 bits (373), Expect = 1.270e-36 Identity = 88/250 (35.20%), Postives = 132/250 (52.80%), Query Frame = 1
Query: 1 GEWAEEMRVKDELISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDAS------------VEMEHALEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIFHADL--DGLRGGGLSPALAKRIFDRKVLWLVRAPQGMVSKTHVVELKSKFLANDLDVVESRALHACLPS-KFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVYK---GMAQGPFDPDA 696
G ++ K+ I+ L +QL G+ + E+V L EAK RL+ A+ ++ GD + E E +EKWD ++T+HP+H++ Q A + W N +A R +KT VPPD+F + + L GLS ALA+R+++R LWL+RA ++ H +L+ KF DLD+ E RAL+ + FEND+ K WR G +RL+ + +D G L + R Y G GPFD DA
Sbjct: 281 GSLRAQLEQKEVQIAMLTKQLEAAGQSAITEVVPLAEAKHRLQAALAVIVGGDGASKRRASERQLTQAEAEAEMEKWDTFITHHPEHVEAQRAARERWWDANGEACADAARALKTCVPPDVFASGTSRERLVAAGLSEALAQRVYERPALWLLRAEDAFAARVHDADLRGKFAFEDLDLRELRALYGRVRDLAFENDAARRKDAWRDGLLERLQSRVAADDAGSLDKRKRRHAAYPADDGEVLGPFDADA 530
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0L2P5_9ZZZZ) HSP 1 Score: 137 bits (344), Expect = 1.360e-34 Identity = 75/210 (35.71%), Postives = 120/210 (57.14%), Query Frame = 1
Query: 34 ELISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDASVEMEHALEKWDKYVTNHPDHIKEQAAEEQAWERENEPKNNEALRLMKTFVPPDIFH-ADLDGLRGGGLSPALAKRIFDRKVLWLVRAPQGMVSKTHVVELKSKFLANDLDVVESRALHACLPSKFENDSDGAKTGWRAGFRQRLKELLGKEDGGHLKPAEVRRPVY 660
E I LK QL G +P+ E+V+ E AK+ L +A+ D S E +E+WD+++ NHP +I+E+ +E+AW+ +N KN EAL + + +P +I+ A +D L GL LA R+ +VLWLV ++ H+ +L+ K+ LD++E RAL+AC+P KFE+D G K W + R++L +++ +E L R Y
Sbjct: 83 EQIEVLKSQLNNAGIKPLSEMVSYETAKEYLTKALKNASESD-SYENIKEVERWDEFIKNHPKYIEEEKEKEEAWKNDNFLKNIEALEVQRNIIPNNIYSGASVDILMEKGLKKELAVRLMRNRVLWLVHMNPNEIAPIHLADLRFKYSFTGLDLIEMRALYACMPEKFEHDDTGEKMQWLSSVREKLSDMINQEKNNTLIARLKRNSAY 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7485.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7485.1.1 >prot_H-canaliculatus_M_contigs7485.1.1 ID=prot_H-canaliculatus_M_contigs7485.1.1|Name=mRNA_H-canaliculatus_M_contigs7485.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=284bp MRVKDELISNLKRQLVTLGEQPMEEIVTLEEAKKRLREAIDALMSGDASVback to top mRNA from alignment at H-canaliculatus_M_contigs7485:265..2210- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7485.1.1 ID=mRNA_H-canaliculatus_M_contigs7485.1.1|Name=mRNA_H-canaliculatus_M_contigs7485.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1946bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7485:265..2210- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7485:265..2210- >mRNA_H-canaliculatus_M_contigs7485.1.1 ID=mRNA_H-canaliculatus_M_contigs7485.1.1|Name=mRNA_H-canaliculatus_M_contigs7485.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=852bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7485:265..2210- (Hapterophycus canaliculatus Oshoro7m male)back to top |